PALB2 24321

Name: PALB2	Sequence: fasta or formatted (1186aa)		NCBI GI: 27436910
Description: partner and localizer of BRCA2		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 58 3 C cysteine 2.6 31 2 D aspartate 5.3 63 3 E glutamate 7.8 93 2 F phenylalanine 3.0 35 1 G glycine 5.1 61 3 H histidine 2.7 32 1 I isoleucine 3.8 45 2 K lysine 7.8 93 3 L leucine 10.6 126 3 M methionine 1.4 17 1 N asparagine 3.8 45 2 P proline 6.8 81 3 Q glutamine 5.2 62 2 R arginine 3.8 45 2 S serine 10.9 129 3 T threonine 6.8 81 2 V valine 5.2 62 2 W tryptophan 0.8 10 1 Y tyrosine 1.4 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 partner and localizer of BRCA2 PHF3 0.008 PHD finger protein 3 CMYA5 0.007 cardiomyopathy associated 5 PNN 0.006 pinin, desmosome associated protein ERCC5 0.006 XPG-complementing protein MYO5A 0.006 myosin VA isoform 2 ZNF385B 0.006 zinc finger protein 385B isoform 1 SP3 0.006 Sp3 transcription factor isoform 2 SP3 0.006 Sp3 transcription factor isoform 1 MYO5A 0.006 myosin VA isoform 1 ZNF385B 0.006 zinc finger protein 385B isoform 3 ZNF385B 0.006 zinc finger protein 385B isoform 2 GON4L 0.005 gon-4-like isoform a LOC100294236 0.005 PREDICTED: similar to diffuse panbronchiolitis crit... MAP4 0.005 microtubule-associated protein 4 isoform 5 MAP4 0.005 microtubule-associated protein 4 isoform 2 TRDN 0.005 triadin CEP170 0.005 centrosomal protein 170kDa isoform beta CEP170 0.005 centrosomal protein 170kDa isoform alpha DPCR1 0.005 diffuse panbronchiolitis critical region 1 protein ... FAM123B 0.005 family with sequence similarity 123B MUC17 0.005 mucin 17 KIAA1370 0.005 hypothetical protein LOC56204 CLIP1 0.005 restin isoform b CLIP1 0.005 restin isoform a TRAF3IP1 0.005 TNF receptor-associated factor 3 interacting protei... SON 0.005 SON DNA-binding protein isoform F SON 0.005 SON DNA-binding protein isoform B AFF4 0.005 ALL1 fused gene from 5q31 WDR5B 0.005 WD repeat domain 5B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.