Guide to the Human Genome
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Name: PES1 Sequence: fasta or formatted (588aa) NCBI GI: 7657455
Description:

pescadillo homolog 1, containing BRCT domain

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         48           2
 C cysteine            1.2          7           1
 D aspartate           4.9         29           2
 E glutamate          12.1         71           6
 F phenylalanine       4.4         26           2
 G glycine             5.3         31           2
 H histidine           2.2         13           1
 I isoleucine          4.3         25           2
 K lysine              9.5         56           3
 L leucine             9.5         56           3
 M methionine          2.0         12           3
 N asparagine          2.9         17           2
 P proline             4.3         25           2
 Q glutamine           3.6         21           2
 R arginine            7.3         43           2
 S serine              4.3         25           1
 T threonine           4.3         25           2
 V valine              5.3         31           3
 W tryptophan          0.7          4           1
 Y tyrosine            3.9         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pescadillo homolog 1, containing BRCT domain 
PRKCSH                0.025   protein kinase C substrate 80K-H isoform 2 
WDR87                 0.025   NYD-SP11 protein 
MYT1                  0.023   myelin transcription factor 1 
RPGR                  0.023   retinitis pigmentosa GTPase regulator isoform C [Hom...
MYST4                 0.023   MYST histone acetyltransferase (monocytic leukemia)...
TTBK1                 0.022   tau tubulin kinase 1 
KIF21A                0.022   kinesin family member 21A 
CLSPN                 0.022   claspin 
PELP1                 0.022   proline, glutamic acid and leucine rich protein 1 [...
LOC100133599          0.021   PREDICTED: hypothetical protein 
NCL                   0.021   nucleolin 
MAP7D1                0.021   MAP7 domain containing 1 
ACIN1                 0.021   apoptotic chromatin condensation inducer 1 
PRKCSH                0.021   protein kinase C substrate 80K-H isoform 1 
CALD1                 0.021   caldesmon 1 isoform 1 
CDC2L2                0.020   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.020   cell division cycle 2-like 2 isoform 1 
ATRX                  0.020   transcriptional regulator ATRX isoform 2 
ATRX                  0.020   transcriptional regulator ATRX isoform 1 
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
LOC283767             0.020   golgi autoantigen, golgin subfamily a-like 
RYR1                  0.020   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.020   skeletal muscle ryanodine receptor isoform 1 
TAF7L                 0.020   TATA box binding protein-associated factor, RNA poly...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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