ZBED1 30853

Name: ZBED1	Sequence: fasta or formatted (694aa)		NCBI GI: 4759258
Description: zinc finger, BED-type containing 1		Referenced in: DNA Transposon and Retrovirus-related Sequences Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 60 2 C cysteine 2.0 14 1 D aspartate 3.6 25 1 E glutamate 9.1 63 2 F phenylalanine 4.3 30 2 G glycine 5.3 37 2 H histidine 1.9 13 2 I isoleucine 3.6 25 1 K lysine 7.1 49 2 L leucine 10.5 73 2 M methionine 2.6 18 1 N asparagine 3.9 27 2 P proline 4.8 33 3 Q glutamine 5.0 35 2 R arginine 4.0 28 1 S serine 6.8 47 2 T threonine 4.8 33 2 V valine 7.2 50 2 W tryptophan 1.9 13 2 Y tyrosine 3.0 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger, BED-type containing 1 ZBED4 0.086 zinc finger, BED-type containing 4 ZNF618 0.012 zinc finger protein 618 ZMYM6 0.009 zinc finger protein 258 CPD 0.007 carboxypeptidase D precursor CCNB3 0.006 cyclin B3 isoform 3 RBM6 0.006 RNA binding motif protein 6 TDRD6 0.006 tudor domain containing 6 BZRAP1 0.005 peripheral benzodiazepine receptor-associated prote... BZRAP1 0.005 peripheral benzodiazepine receptor-associated prote... PARP8 0.005 poly (ADP-ribose) polymerase family, member 8 WWC1 0.004 WW and C2 domain containing 1 isoform 2 WWC1 0.004 WW and C2 domain containing 1 isoform 1 C19orf26 0.004 downstream of Stk11 FGD6 0.004 FYVE, RhoGEF and PH domain containing 6 CNGB1 0.004 cyclic nucleotide gated channel beta 1 isoform a [H... DOCK1 0.004 dedicator of cytokinesis 1 TRAFD1 0.004 TRAF-type zinc finger domain containing 1 TRAFD1 0.004 TRAF-type zinc finger domain containing 1 BRD8 0.004 bromodomain containing 8 isoform 3 BRD8 0.004 bromodomain containing 8 isoform 1 ITK 0.004 IL2-inducible T-cell kinase HTT 0.004 huntingtin LOC729537 0.004 PREDICTED: hypothetical protein LOC729537 0.004 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.