Guide to the Human Genome
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Name: ZNF618 Sequence: fasta or formatted (861aa) NCBI GI: 124286830
Description:

zinc finger protein 618

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         76           3
 C cysteine            3.4         29           1
 D aspartate           3.6         31           2
 E glutamate           8.1         70           2
 F phenylalanine       3.1         27           1
 G glycine             5.5         47           2
 H histidine           2.6         22           2
 I isoleucine          3.5         30           2
 K lysine              7.1         61           3
 L leucine             8.4         72           3
 M methionine          1.9         16           1
 N asparagine          5.1         44           2
 P proline             4.8         41           3
 Q glutamine           5.5         47           2
 R arginine            4.3         37           3
 S serine              7.8         67           3
 T threonine           5.1         44           3
 V valine              7.4         64           2
 W tryptophan          0.8          7           1
 Y tyrosine            3.4         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 618 
ZNF208                0.029   zinc finger protein 208 
ZNF93                 0.027   zinc finger protein 93 
ZNF43                 0.026   zinc finger protein 43 
ZNF275                0.026   zinc finger protein 275 
ZNF77                 0.026   zinc finger protein 77 
ZNF709                0.026   zinc finger protein 709 isoform b 
GLI4                  0.026   GLI-Kruppel family member GLI4 
ZNF709                0.026   zinc finger protein 709 isoform a 
LOC100292052          0.026   PREDICTED: similar to hCG1773661 
LOC100287226          0.026   PREDICTED: similar to hCG1773661 
LOC100287226          0.026   PREDICTED: hypothetical protein XP_002343677 
ZNF676                0.026   zinc finger protein 676 
ZNF85                 0.026   zinc finger protein 85 
ZNF718                0.025   zinc finger protein 718 
ZNF92                 0.024   zinc finger protein 92 isoform 1 
ZNF92                 0.024   zinc finger protein 92 isoform 2 
ZNF840                0.024   PREDICTED: zinc finger protein 840 
ZNF840                0.024   PREDICTED: zinc finger protein 840 
ZNF840                0.024   PREDICTED: zinc finger protein 840 
ZNF90                 0.024   zinc finger protein 90 
ZNF229                0.024   zinc finger protein 229 
ZNF492                0.024   zinc finger protein 492 
ZNF66                 0.024   PREDICTED: zinc finger protein 66 
ZNF695                0.024   zinc finger protein SBZF3 
ZNF235                0.024   zinc finger protein 93 homolog 
ZNF98                 0.024   zinc finger protein 98 
LOC100290283          0.023   PREDICTED: hypothetical protein XP_002347961 
ZNF433                0.023   zinc finger protein 433 
ZNF66                 0.023   PREDICTED: zinc finger protein 66 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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