Guide to the Human Genome
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Name: SLC39A6 Sequence: fasta or formatted (433aa) NCBI GI: 153252214
Description:

solute carrier family 39 (zinc transporter), member 6 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [755aa] solute carrier family 39 (zinc transporter), member 6 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         35           2
 C cysteine            1.2          5           1
 D aspartate           4.8         21           3
 E glutamate           6.5         28           4
 F phenylalanine       5.3         23           2
 G glycine             6.0         26           2
 H histidine           8.3         36           5
 I isoleucine          5.3         23           2
 K lysine              5.3         23           4
 L leucine            11.3         49           2
 M methionine          3.2         14           1
 N asparagine          3.2         14           1
 P proline             3.5         15           2
 Q glutamine           3.7         16           2
 R arginine            1.8          8           1
 S serine              8.3         36           2
 T threonine           3.9         17           1
 V valine              6.0         26           1
 W tryptophan          0.9          4           1
 Y tyrosine            3.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 39 (zinc transporter), member... 
SLC39A6               0.995   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.408   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.408   solute carrier family 39 (zinc transporter), member ...
SLC39A14              0.193   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.190   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.190   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.189   solute carrier family 39 (zinc transporter), member...
SLC39A5               0.132   solute carrier family 39 (metal ion transporter), m...
SLC39A5               0.132   solute carrier family 39 (metal ion transporter), m...
SLC39A8               0.124   solute carrier family 39 (zinc transporter), member ...
SLC39A8               0.124   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.124   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.124   solute carrier family 39 (zinc transporter), member...
SLC39A4               0.122   solute carrier family 39 (zinc transporter), member...
SLC39A4               0.122   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.120   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.120   solute carrier family 39 (zinc transporter), member...
SLC39A7               0.071   solute carrier family 39, member 7 
SLC39A7               0.071   solute carrier family 39, member 7 
SLC39A13              0.057   solute carrier family 39 (zinc transporter), member ...
SLC39A13              0.057   solute carrier family 39 (zinc transporter), member...
SLC39A9               0.024   solute carrier family 39 (zinc transporter), member ...
SLC39A11              0.023   solute carrier family 39, member 11 isoform 1 [Homo...
SLC39A11              0.023   solute carrier family 39, member 11 isoform 2 [Homo...
HRCT1                 0.022   histidine rich carboxyl terminus 1 
NUFIP2                0.022   nuclear fragile X mental retardation protein interac...
C10orf140             0.021   hypothetical protein LOC387640 
HRG                   0.021   histidine-rich glycoprotein precursor 
MAFA                  0.020   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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