Guide to the Human Genome
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Name: SLC39A11 Sequence: fasta or formatted (335aa) NCBI GI: 229577418
Description:

solute carrier family 39, member 11 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [342aa] solute carrier family 39, member 11 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.2         51           3
 C cysteine            0.0          0           0
 D aspartate           2.4          8           2
 E glutamate           4.5         15           1
 F phenylalanine       6.9         23           2
 G glycine            12.2         41           2
 H histidine           0.9          3           1
 I isoleucine          4.8         16           2
 K lysine              2.4          8           3
 L leucine            11.6         39           2
 M methionine          3.3         11           2
 N asparagine          2.1          7           1
 P proline             5.7         19           1
 Q glutamine           2.7          9           1
 R arginine            3.0         10           2
 S serine              7.8         26           2
 T threonine           3.9         13           2
 V valine              7.2         24           2
 W tryptophan          1.8          6           1
 Y tyrosine            1.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 39, member 11 isoform 2 [Homo... 
SLC39A11              0.989   solute carrier family 39, member 11 isoform 1 [Homo...
SLC39A4               0.040   solute carrier family 39 (zinc transporter), member...
SLC39A4               0.040   solute carrier family 39 (zinc transporter), member...
SLC39A6               0.040   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.036   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.036   solute carrier family 39 (zinc transporter), member ...
SLC39A8               0.033   solute carrier family 39 (zinc transporter), member...
SLC39A6               0.032   solute carrier family 39 (zinc transporter), member...
SLC39A2               0.030   solute carrier family 39 (zinc transporter), member...
SLC39A5               0.030   solute carrier family 39 (metal ion transporter), m...
SLC39A5               0.030   solute carrier family 39 (metal ion transporter), m...
SLC39A1               0.029   solute carrier family 39 (zinc transporter), member ...
SLC39A13              0.029   solute carrier family 39 (zinc transporter), member ...
SLC39A8               0.027   solute carrier family 39 (zinc transporter), member ...
SLC39A8               0.027   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.027   solute carrier family 39 (zinc transporter), member...
SLC39A13              0.025   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.021   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.021   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.021   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.016   solute carrier family 39 (zinc transporter), member...
NIPAL4                0.016   ichthyin protein 
SLC39A7               0.016   solute carrier family 39, member 7 
SLC39A7               0.016   solute carrier family 39, member 7 
SLC39A14              0.016   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.014   solute carrier family 39 (zinc transporter), member...
CD2AP                 0.008   CD2-associated protein 
LOC389217             0.008   PREDICTED: similar to SET translocation 
TRIM71                0.008   tripartite motif-containing 71 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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