Guide to the Human Genome
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Name: SLC39A10 Sequence: fasta or formatted (831aa) NCBI GI: 55741750
Description:

solute carrier family 39 (zinc transporter), member 10

Referenced in:

Solute Carrier Families

Other entries for this name:
alt mRNA [831aa] solute carrier family 39 (zinc transporter), member 10
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         40           3
 C cysteine            1.8         15           1
 D aspartate           5.8         48           2
 E glutamate           7.3         61           3
 F phenylalanine       3.7         31           2
 G glycine             7.6         63           2
 H histidine          10.7         89           3
 I isoleucine          5.8         48           2
 K lysine              6.1         51           3
 L leucine            10.6         88           2
 M methionine          2.0         17           2
 N asparagine          5.8         48           2
 P proline             3.5         29           2
 Q glutamine           3.4         28           2
 R arginine            3.1         26           1
 S serine              5.9         49           1
 T threonine           4.3         36           1
 V valine              4.9         41           2
 W tryptophan          0.7          6           1
 Y tyrosine            2.0         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 39 (zinc transporter), member ... 
SLC39A10              1.000   solute carrier family 39 (zinc transporter), member...
SLC39A6               0.265   solute carrier family 39 (zinc transporter), member...
SLC39A6               0.203   solute carrier family 39 (zinc transporter), member...
SLC39A5               0.122   solute carrier family 39 (metal ion transporter), m...
SLC39A5               0.122   solute carrier family 39 (metal ion transporter), m...
SLC39A14              0.112   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.112   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.112   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.094   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.079   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.079   solute carrier family 39 (zinc transporter), member...
SLC39A4               0.079   solute carrier family 39 (zinc transporter), member...
SLC39A4               0.079   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.072   solute carrier family 39 (zinc transporter), member ...
SLC39A8               0.072   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.072   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.064   solute carrier family 39 (zinc transporter), member...
SLC39A7               0.050   solute carrier family 39, member 7 
SLC39A7               0.050   solute carrier family 39, member 7 
SLC39A13              0.036   solute carrier family 39 (zinc transporter), member ...
SLC39A13              0.034   solute carrier family 39 (zinc transporter), member...
SLC39A9               0.020   solute carrier family 39 (zinc transporter), member ...
SLC39A11              0.013   solute carrier family 39, member 11 isoform 1 [Homo...
SLC39A11              0.013   solute carrier family 39, member 11 isoform 2 [Homo...
HRC                   0.012   histidine rich calcium binding protein precursor [Hom...
SLC39A2               0.011   solute carrier family 39 (zinc transporter), member...
TSC22D1               0.011   TSC22 domain family, member 1 isoform 1 
HRG                   0.010   histidine-rich glycoprotein precursor 
SNIP1                 0.010   Smad nuclear interacting protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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