Guide to the Human Genome
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Name: SLC39A5 Sequence: fasta or formatted (540aa) NCBI GI: 206597541
Description:

solute carrier family 39 (metal ion transporter), member 5

Referenced in:

Solute Carrier Families

Other entries for this name:
alt mRNA [540aa] solute carrier family 39 (metal ion transporter), member 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         45           2
 C cysteine            1.5          8           2
 D aspartate           3.3         18           1
 E glutamate           3.7         20           2
 F phenylalanine       2.6         14           1
 G glycine            13.7         74           3
 H histidine           4.1         22           1
 I isoleucine          0.9          5           1
 K lysine              0.7          4           1
 L leucine            22.8        123           4
 M methionine          1.7          9           2
 N asparagine          2.6         14           1
 P proline             9.1         49           2
 Q glutamine           3.7         20           1
 R arginine            5.0         27           2
 S serine              5.9         32           2
 T threonine           3.3         18           2
 V valine              5.2         28           2
 W tryptophan          1.1          6           1
 Y tyrosine            0.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 39 (metal ion transporter), m... 
SLC39A5               1.000   solute carrier family 39 (metal ion transporter), m...
SLC39A10              0.197   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.197   solute carrier family 39 (zinc transporter), member ...
SLC39A4               0.165   solute carrier family 39 (zinc transporter), member...
SLC39A4               0.165   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.134   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.128   solute carrier family 39 (zinc transporter), member...
SLC39A6               0.123   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.110   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.109   solute carrier family 39 (zinc transporter), member ...
SLC39A8               0.109   solute carrier family 39 (zinc transporter), member...
SLC39A6               0.107   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.107   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.105   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.104   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.104   solute carrier family 39 (zinc transporter), member...
SLC39A7               0.098   solute carrier family 39, member 7 
SLC39A7               0.098   solute carrier family 39, member 7 
SLC39A14              0.097   solute carrier family 39 (zinc transporter), member...
SLC39A13              0.075   solute carrier family 39 (zinc transporter), member...
SLC39A13              0.073   solute carrier family 39 (zinc transporter), member ...
SLC39A2               0.023   solute carrier family 39 (zinc transporter), member...
SLC39A9               0.019   solute carrier family 39 (zinc transporter), member ...
SLC39A11              0.018   solute carrier family 39, member 11 isoform 1 [Homo...
SLC39A11              0.018   solute carrier family 39, member 11 isoform 2 [Homo...
KDM1                  0.012   amine oxidase (flavin containing) domain 2 isoform a...
KDM1                  0.009   amine oxidase (flavin containing) domain 2 isoform b...
SLC39A1               0.009   solute carrier family 39 (zinc transporter), member ...
RAVER1                0.009   RAVER1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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