Guide to the Human Genome
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Name: SLC39A4 Sequence: fasta or formatted (622aa) NCBI GI: 115430259
Description:

solute carrier family 39 (zinc transporter), member 4 isoform 1

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [647aa] solute carrier family 39 (zinc transporter), member 4 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         70           3
 C cysteine            2.4         15           1
 D aspartate           3.9         24           2
 E glutamate           5.6         35           2
 F phenylalanine       2.9         18           2
 G glycine             8.5         53           2
 H histidine           3.9         24           1
 I isoleucine          1.1          7           1
 K lysine              1.0          6           1
 L leucine            18.2        113           4
 M methionine          1.4          9           1
 N asparagine          1.3          8           1
 P proline             7.4         46           2
 Q glutamine           3.7         23           3
 R arginine            4.3         27           2
 S serine              8.8         55           3
 T threonine           4.2         26           1
 V valine              6.6         41           2
 W tryptophan          1.6         10           1
 Y tyrosine            1.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 39 (zinc transporter), member... 
SLC39A4               0.935   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.213   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.201   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.146   solute carrier family 39 (zinc transporter), member...
SLC39A5               0.144   solute carrier family 39 (metal ion transporter), m...
SLC39A5               0.144   solute carrier family 39 (metal ion transporter), m...
SLC39A14              0.140   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.140   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.131   solute carrier family 39 (zinc transporter), member ...
SLC39A8               0.131   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.130   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.123   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.118   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.111   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.111   solute carrier family 39 (zinc transporter), member ...
SLC39A6               0.105   solute carrier family 39 (zinc transporter), member...
SLC39A7               0.099   solute carrier family 39, member 7 
SLC39A7               0.099   solute carrier family 39, member 7 
SLC39A6               0.086   solute carrier family 39 (zinc transporter), member...
SLC39A13              0.074   solute carrier family 39 (zinc transporter), member ...
SLC39A13              0.073   solute carrier family 39 (zinc transporter), member...
SLC39A9               0.021   solute carrier family 39 (zinc transporter), member ...
SLC39A11              0.020   solute carrier family 39, member 11 isoform 1 [Homo...
SLC39A11              0.020   solute carrier family 39, member 11 isoform 2 [Homo...
SLC39A2               0.016   solute carrier family 39 (zinc transporter), member...
SEC16A                0.009   SEC16 homolog A 
WNK4                  0.007   WNK lysine deficient protein kinase 4 
LOC100289284          0.007   PREDICTED: hypothetical protein XP_002342335 
ZNF488                0.007   zinc finger protein 488 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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