Guide to the Human Genome
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Name: KRTAP3-3 Sequence: fasta or formatted (98aa) NCBI GI: 15055511
Description:

keratin associated protein 3-3

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.0          2           1
 C cysteine           19.4         19           2
 D aspartate           3.1          3           1
 E glutamate           3.1          3           1
 F phenylalanine       2.0          2           1
 G glycine             5.1          5           1
 H histidine           2.0          2           1
 I isoleucine          2.0          2           1
 K lysine              1.0          1           1
 L leucine             9.2          9           2
 M methionine          1.0          1           1
 N asparagine          3.1          3           1
 P proline            16.3         16           3
 Q glutamine           3.1          3           1
 R arginine            3.1          3           1
 S serine              7.1          7           2
 T threonine          12.2         12           2
 V valine              4.1          4           1
 W tryptophan          1.0          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 3-3 
KRTAP3-2              0.976   keratin associated protein 3.2 
KRTAP3-1              0.652   keratin associated protein 3.1 
LOC100131696          0.157   PREDICTED: keratin associated protein 
LOC100131696          0.157   PREDICTED: keratin associated protein 
LOC100288060          0.157   PREDICTED: hypothetical protein XP_002343557 
KRTAP11-1             0.152   keratin associated protein 11-1 
LOC728318             0.138   PREDICTED: hypothetical protein 
LOC728318             0.138   PREDICTED: hypothetical protein 
LOC728318             0.129   PREDICTED: hypothetical protein 
LOC728341             0.119   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP10-8             0.110   keratin associated protein 10-8 
KRTAP4-8              0.105   PREDICTED: keratin associated protein 4-8 
KRTAP9-2              0.105   keratin associated protein 9.2 
KRTAP9-4              0.105   keratin associated protein 9-4 
KRTAP10-4             0.105   keratin associated protein 10-4 
KRTAP9-8              0.105   keratin associated protein 9.8 
KRTAP4-8              0.100   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.100   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-3              0.100   keratin associated protein 4-3 
KRTAP4-8              0.100   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.100   keratin associated protein 4.8 
KRTAP4-4              0.100   keratin associated protein 4.4 
KRTAP4-11             0.095   keratin associated protein 4-11 
KRTAP4-9              0.095   keratin associated protein 4-9 
KRTAP12-4             0.095   keratin associated protein 12-4 
KRTAP4-9              0.095   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-9              0.095   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP9-3              0.095   keratin associated protein 9.3 
KRTAP4-8              0.090   PREDICTED: keratin associated protein 4-8 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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