Guide to the Human Genome
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Name: CALML4 Sequence: fasta or formatted (149aa) NCBI GI: 110227596
Description:

calmodulin-like 4 isoform 2

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [196aa] calmodulin-like 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4          8           2
 C cysteine            0.0          0           0
 D aspartate           8.1         12           2
 E glutamate           8.1         12           1
 F phenylalanine       4.0          6           1
 G glycine             9.4         14           2
 H histidine           2.7          4           1
 I isoleucine          4.7          7           1
 K lysine             10.1         15           2
 L leucine            10.7         16           2
 M methionine          4.7          7           1
 N asparagine          2.0          3           1
 P proline             6.0          9           3
 Q glutamine           2.7          4           1
 R arginine            4.7          7           1
 S serine              7.4         11           2
 T threonine           4.7          7           1
 V valine              2.7          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calmodulin-like 4 isoform 2 
CALML4                0.917   calmodulin-like 4 isoform 1 
CALM3                 0.257   calmodulin 3 
CALM2                 0.257   calmodulin 2 
CALM1                 0.257   calmodulin 1 
CALML3                0.199   calmodulin-like 3 
CETN1                 0.145   centrin 1 
CALML5                0.141   calmodulin-like 5 
CETN2                 0.141   caltractin 
MYL12B                0.141   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.141   myosin regulatory light chain MRCL2 isoform B [Homo...
MYL12B                0.141   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.141   myosin regulatory light chain MRCL2 isoform A 
MYL9                  0.141   myosin regulatory light chain 9 isoform a 
MYL12A                0.141   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL2                  0.127   slow cardiac myosin regulatory light chain 2 
TNNC1                 0.120   troponin C, slow 
LOC391722             0.116   PREDICTED: similar to myosin regulatory light chain...
LOC391722             0.116   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.116   PREDICTED: similar to myosin regulatory light chain ...
TNNC2                 0.109   fast skeletal muscle troponin C 
MYL4                  0.105   atrial/embryonic alkali myosin light chain 
MYL4                  0.105   atrial/embryonic alkali myosin light chain 
MYL10                 0.098   myosin, light chain 10, regulatory 
MYL5                  0.098   myosin regulatory light chain 5 
CABP4                 0.094   calcium binding protein 4 
MYL7                  0.094   myosin light chain 2a 
CALML6                0.094   calmodulin-like 6 
MYL3                  0.091   slow skeletal ventricular myosin alkali light chain 3...
CETN3                 0.091   centrin 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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