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Search of human proteins with 15011916
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]
(217 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15011916 nucleolar protein family A, member 1 [Homo sapiens] 473 e-134
gi|9506713 nucleolar protein family A, member 1 [Homo sapiens] 473 e-134
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 87 1e-17
gi|109452587 family with sequence similarity 98, member B isofor... 81 8e-16
gi|12056465 fibrillarin [Homo sapiens] 71 6e-13
gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s... 70 1e-12
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap... 70 1e-12
gi|55956788 nucleolin [Homo sapiens] 69 2e-12
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s... 68 7e-12
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s... 68 7e-12
gi|119395750 keratin 1 [Homo sapiens] 64 8e-11
gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sap... 61 8e-10
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 60 1e-09
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 60 1e-09
gi|195972866 keratin 10 [Homo sapiens] 60 1e-09
gi|47132620 keratin 2 [Homo sapiens] 60 1e-09
gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapi... 59 2e-09
gi|55956899 keratin 9 [Homo sapiens] 59 4e-09
gi|131412228 keratin 13 isoform b [Homo sapiens] 57 9e-09
gi|131412225 keratin 13 isoform a [Homo sapiens] 57 9e-09
gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo sapi... 57 9e-09
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 57 1e-08
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 57 1e-08
gi|56699482 hypothetical protein LOC25940 [Homo sapiens] 57 1e-08
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 57 1e-08
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 57 1e-08
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 57 1e-08
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 57 1e-08
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 57 2e-08
gi|109148552 keratin 3 [Homo sapiens] 57 2e-08
>gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 473 bits (1216), Expect = e-134
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK
Sbjct: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Query: 61 GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL 120
GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL
Sbjct: 61 GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL 120
Query: 121 RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR 180
RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR
Sbjct: 121 RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR 180
Query: 181 GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217
GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH
Sbjct: 181 GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217
>gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 473 bits (1216), Expect = e-134
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK
Sbjct: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Query: 61 GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL 120
GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL
Sbjct: 61 GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL 120
Query: 121 RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR 180
RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR
Sbjct: 121 RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR 180
Query: 181 GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217
GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH
Sbjct: 181 GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 86.7 bits (213), Expect = 1e-17
Identities = 88/255 (34%), Positives = 108/255 (42%), Gaps = 65/255 (25%)
Query: 1 MSFRGGGRGGFNR-----GGGGGGF---NRGGSSNHFRGGGGGGGGGNF----------- 41
MS GG GG+ GGG GG+ +RGG GGGGGGGGG +
Sbjct: 184 MSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRG 243
Query: 42 RGGGRGGFGRGGG--RGGFNK---GQDQGPPERVVLLGEFLHPCEDDIVCKCT------- 89
RGGGRGG G GG RGGFNK +DQG H E D T
Sbjct: 244 RGGGRGGRGGMGGSDRGGFNKFGGPRDQGSR----------HDSEQDNSDNNTIFVQGLG 293
Query: 90 ---TDENKVPYFNAPVYLENKEQIGK------VDEIFGQLRDFYFSVKLSENMKASSFKK 140
T E+ YF ++ ++ G+ D G+L+ +S + S+
Sbjct: 294 ENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKG---EATVSFDDPPSAKAA 350
Query: 141 LQKFYIDPYKLLPLQ-RFLPRPPGEKGPPRGGGRGGRGGGRGGGGRGG--GRGGGFRGGR 197
+ F + P++ F R R G G GRGG GRGG GRGG GG
Sbjct: 351 IDWFDGKEFSGNPIKVSFATR--------RADFNRGGGNGRGGRGRGGPMGRGGYGGGGS 402
Query: 198 GGGG-GGFRGGRGGG 211
GGGG GGF G GGG
Sbjct: 403 GGGGRGGFPSGGGGG 417
Score = 77.8 bits (190), Expect = 7e-15
Identities = 83/275 (30%), Positives = 103/275 (37%), Gaps = 89/275 (32%)
Query: 6 GGRGGFNRGGGGGGF----------------------------------NRGGSSNHFRG 31
GG GG GGGGG + +RGG G
Sbjct: 166 GGGGG---GGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSG 222
Query: 32 GGGGGGGGNF-----------RGGGRGGFGRGGG--RGGFNK---GQDQGPPERVVLLGE 75
GGGGGGGG + RGGGRGG G GG RGGFNK +DQG
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGS--------- 273
Query: 76 FLHPCEDDIVCKCT----------TDENKVPYFNAPVYLENKEQIGK------VDEIFGQ 119
H E D T T E+ YF ++ ++ G+ D G+
Sbjct: 274 -RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGK 332
Query: 120 LRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRG-- 177
L+ +S + S+ + F + P++ + G GRGGRG
Sbjct: 333 LKG---EATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRG 389
Query: 178 -----GGRGGGGRGGGRGGGFRGGRGGGGGGFRGG 207
GG GGGG GGG GGF G GGGGG R G
Sbjct: 390 GPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAG 424
Score = 53.9 bits (128), Expect = 1e-07
Identities = 34/67 (50%), Positives = 35/67 (52%), Gaps = 16/67 (23%)
Query: 163 GEKGPPRGGGRGGRG----GGRGGGGRGGGRGGGFRG-----------GRGGGGGGFRGG 207
G + GGG GG G GGRG GG GGG GGG G GRGGG GG RGG
Sbjct: 195 GNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGG-RGG 253
Query: 208 RGGGFRG 214
GG RG
Sbjct: 254 MGGSDRG 260
Score = 53.9 bits (128), Expect = 1e-07
Identities = 31/58 (53%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
GGG GG + GG G RGG + RGG G GG RGG RGG G GG RGGF G+
Sbjct: 456 GGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGD--RGGFRGGRG-GGDRGGFGPGK 510
Score = 53.5 bits (127), Expect = 1e-07
Identities = 35/61 (57%), Positives = 37/61 (60%), Gaps = 14/61 (22%)
Query: 169 RGG-GRGGRGGGRGGGGRG----------GGRGGGFRGGRGGGGGGFRGG--RGGGFRGR 215
RGG GRGG GGG GGGG G GRGGG RGGRGG GG RGG + GG R +
Sbjct: 213 RGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGG-RGGRGGMGGSDRGGFNKFGGPRDQ 271
Query: 216 G 216
G
Sbjct: 272 G 272
Score = 48.9 bits (115), Expect = 3e-06
Identities = 32/84 (38%), Positives = 39/84 (46%), Gaps = 24/84 (28%)
Query: 5 GGGRGGFNRGGGGGG-------------------FNRGGSSNHFRG----GGGGGGGGNF 41
GGGRGGF GGGGGG F+ N + G GGG GG+
Sbjct: 404 GGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSH 463
Query: 42 RGGGRGGFGRGGGRGGFNKGQDQG 65
GG G R GGRGG+++G +G
Sbjct: 464 MGGNYGD-DRRGGRGGYDRGGYRG 486
Score = 48.5 bits (114), Expect = 4e-06
Identities = 40/119 (33%), Positives = 44/119 (36%), Gaps = 57/119 (47%)
Query: 4 RGG-GRGG-FNRGGGGGGFNRGGSSNHFRGGGGGGGG----------------------- 38
RGG GRGG RGG GGG + GG F GGGGGGG
Sbjct: 383 RGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRN 442
Query: 39 --------------------------GNFRGGGRGGF------GRGGGRGGFNKGQDQG 65
G+ R GGRGG+ GRGG RGGF G+ G
Sbjct: 443 ECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGG 501
Score = 47.8 bits (112), Expect = 7e-06
Identities = 32/66 (48%), Positives = 33/66 (50%), Gaps = 19/66 (28%)
Query: 170 GGGRGGRGGGR---GGGGRGG---------GRGGGFRGGRGGGGGGFRG-------GRGG 210
GGG GG G + GGGG GG GRGG GG GGGGG R GRGG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGG 246
Query: 211 GFRGRG 216
G GRG
Sbjct: 247 GRGGRG 252
Score = 47.0 bits (110), Expect = 1e-05
Identities = 29/50 (58%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 163 GEKGPPRGGGRGG--RGGGRG-GGGRGGGRGGGFRGGRGGGGGGFRGGRG 209
G G R GGRGG RGG RG GG RGG RGG G RGG G G RG
Sbjct: 466 GNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRG 515
Score = 46.6 bits (109), Expect = 2e-05
Identities = 29/60 (48%), Positives = 31/60 (51%), Gaps = 14/60 (23%)
Query: 170 GGGRGGRGGGR---------GGGGRGGGRGGGFRGGRGGGGGGF----RGGRGGGFRGRG 216
GGG GG GGG GGG GGG G + G GGG GG+ RGGRG G G G
Sbjct: 166 GGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSG-GGGSGGYGQQDRGGRGRGGSGGG 224
Score = 45.8 bits (107), Expect = 3e-05
Identities = 36/95 (37%), Positives = 40/95 (42%), Gaps = 45/95 (47%)
Query: 167 PPRGGGR-------GGRGGGRGGGGR----------GGGRGGGF---------------- 193
PP+G G+ G GGG GGGG GGG GGG+
Sbjct: 151 PPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQ 210
Query: 194 --RGGRG-GGGGGFRGGRGGGF---------RGRG 216
RGGRG GG GG GG GGG+ RGRG
Sbjct: 211 QDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRG 245
Score = 45.4 bits (106), Expect = 4e-05
Identities = 26/49 (53%), Positives = 28/49 (57%), Gaps = 11/49 (22%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRG 52
R GGRGG++RGG G RGG FRGG G GG RGGFG G
Sbjct: 472 RRGGRGGYDRGGYRG---RGGDRGGFRGGRG--------GGDRGGFGPG 509
Score = 42.7 bits (99), Expect = 2e-04
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64
G + +N G G N+ SS+ GGGGGGGGG G + GGG GG QDQ
Sbjct: 144 GQQQSYNPPQGYGQQNQYNSSS---GGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQ 199
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 80.9 bits (198), Expect = 8e-16
Identities = 37/51 (72%), Positives = 39/51 (76%)
Query: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211
PP +K GGGRGG GGG GGGGRGGG GGG RGG GGGGGG+ GG GGG
Sbjct: 323 PPWQKRQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGG 373
Score = 75.1 bits (183), Expect = 4e-14
Identities = 42/73 (57%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 148 PYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGRGGGGRGG-GRGGGFRGGRGGGGGGFRG 206
P ++ P Q+ G G GGG GGRGGG GGGGRGG G GGG GG GGGGGG+ G
Sbjct: 319 PPEMPPWQKRQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGG 378
Query: 207 GRG---GGFRGRG 216
G G GGF+GRG
Sbjct: 379 GGGGGRGGFQGRG 391
Score = 70.1 bits (170), Expect = 1e-12
Identities = 38/61 (62%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64
GGG GG RGGGGGG RGG + GGGGG GGG GGG GG G GGGRGGF D
Sbjct: 339 GGGGGGGGRGGGGGGGGRGG----WGGGGGGWGGGGGGGGGWGG-GGGGGRGGFQGRGDY 393
Query: 65 G 65
G
Sbjct: 394 G 394
Score = 68.9 bits (167), Expect = 3e-12
Identities = 35/58 (60%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRG----GRGGGFRGRG 216
G G GGGRGG GGG GG G GGG GGG+ GG GGG GGF+G G GG+ GRG
Sbjct: 346 GRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRG 403
Score = 68.9 bits (167), Expect = 3e-12
Identities = 36/65 (55%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG----GGRGGFGRGGGRGGFNK 60
GGGRGG+ GGGGGG+ GG GGGGGGG G F+G GGRGG+G GG GG
Sbjct: 353 GGGRGGW--GGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGY 410
Query: 61 GQDQG 65
G G
Sbjct: 411 GDPYG 415
Score = 55.5 bits (132), Expect = 4e-08
Identities = 34/65 (52%), Positives = 35/65 (53%), Gaps = 14/65 (21%)
Query: 163 GEKGPPRGGGRGGRGGGRGG-------GGRGGGRGGGFRGGR-------GGGGGGFRGGR 208
G G GG GG GGGRGG GGRGG G G GGR GGGGGG GG
Sbjct: 367 GGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGG 426
Query: 209 GGGFR 213
GGG+R
Sbjct: 427 GGGYR 431
Score = 54.3 bits (129), Expect = 8e-08
Identities = 31/66 (46%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNH----------FRGGGGGGGGGNFRGGGRGGFGRGGG 54
GGG GG GGGGG RGG RGG GG G G+ GGG GG G GGG
Sbjct: 367 GGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGG 426
Query: 55 RGGFNK 60
GG+ +
Sbjct: 427 GGGYRR 432
Score = 36.6 bits (83), Expect = 0.017
Identities = 18/28 (64%), Positives = 18/28 (64%)
Query: 30 RGGGGGGGGGNFRGGGRGGFGRGGGRGG 57
R GGGG GG GGG GG G GGG GG
Sbjct: 328 RQEGGGGRGGWGGGGGGGGRGGGGGGGG 355
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 71.2 bits (173), Expect = 6e-13
Identities = 40/58 (68%), Positives = 40/58 (68%), Gaps = 11/58 (18%)
Query: 168 PRGGGRGGRGG--------GRGGGGRGGGRGGGFRG-GRGGGGGGFRGGRGGGFRGRG 216
PRGGG GGRGG GRGG G G GRGGGFRG GRGGGGGG GG GGG RG G
Sbjct: 7 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGG--GGGGGGGRGGG 62
Score = 65.5 bits (158), Expect = 3e-11
Identities = 48/122 (39%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 6 GGRGGFN-------RGGGGGGFNRGGS-SNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGG 57
GGRGGF RGG GGG RGG RGGGGGGGGG G G GGF GG RG
Sbjct: 13 GGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGR 72
Query: 58 FNKGQDQGPPERVVLLGEFLHPCEDDIVCKCTTD----ENKVPYFNAPVYLENKEQIGKV 113
G+ + V++ H E +C+ D +N VP VY E + I +
Sbjct: 73 GRGGKRGNQSGKNVMVEPHRH--EGVFICRGKEDALVTKNLVP--GESVYGEKRVSISEG 128
Query: 114 DE 115
D+
Sbjct: 129 DD 130
Score = 61.2 bits (147), Expect = 6e-10
Identities = 42/74 (56%), Positives = 42/74 (56%), Gaps = 17/74 (22%)
Query: 157 FLPRPPGEKGPPRGG-----GRGGRGG-----GRGGG----GRGGGRGGGFRGGRGGGGG 202
F PR G G RGG GRGGRGG GRGGG GRGGG GGG GG G GGG
Sbjct: 5 FSPRGGGFGG--RGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGG 62
Query: 203 GFRGGRGGGFRGRG 216
GF G G RGRG
Sbjct: 63 GFHSGGNRG-RGRG 75
Score = 59.3 bits (142), Expect = 2e-09
Identities = 32/52 (61%), Positives = 32/52 (61%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
G G RG G G RG GRGGGG GGG GGG RGG G GG RG GG RG
Sbjct: 28 GGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 79
Score = 53.5 bits (127), Expect = 1e-07
Identities = 34/58 (58%), Positives = 35/58 (60%), Gaps = 10/58 (17%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
RGGG GG RGG G +RGG RGG GG GGG RGGG G GRGGG GG G
Sbjct: 8 RGGGFGG--RGGFG---DRGG-----RGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGG 55
Score = 53.5 bits (127), Expect = 1e-07
Identities = 30/50 (60%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFR--GGRGGGGGGFRGGRGG 210
G G RG GRGG GGG GGGG GG GGGF G RG G GG RG + G
Sbjct: 35 GRGGGFRGRGRGGGGGG-GGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSG 83
Score = 46.2 bits (108), Expect = 2e-05
Identities = 33/61 (54%), Positives = 36/61 (59%), Gaps = 13/61 (21%)
Query: 10 GFN-RGGGGGGFNRGGSSNHFRGGGGGGGG--------GNFRGGGRGGFGRGGGRGGFNK 60
GF+ RGGG GG RGG + RGG GG GG G FRG GRGG G GGG GG +
Sbjct: 4 GFSPRGGGFGG--RGGFGD--RGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGR 59
Query: 61 G 61
G
Sbjct: 60 G 60
Score = 39.7 bits (91), Expect = 0.002
Identities = 24/45 (53%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 157 FLPRPPGEKGPPRGGGRGGRGGG--RGGGGRGGGRGGGFRGGRGG 199
F R G G GGG GGRGGG GG RG GRGG RG + G
Sbjct: 40 FRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGK-RGNQSG 83
>gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo
sapiens]
Length = 600
Score = 70.5 bits (171), Expect = 1e-12
Identities = 79/230 (34%), Positives = 93/230 (40%), Gaps = 48/230 (20%)
Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGPP- 67
G NRG G GGF+RGG S RGG GGG GG G RGGF + GG D GPP
Sbjct: 240 GPDNRGRGRGGFDRGGMS---RGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPV 296
Query: 68 -----------------ERVVL--LGEFLHPCEDDIVCKCT---------TDENKVPYFN 99
+ V L L +F C + K T E P +
Sbjct: 297 DPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGD 356
Query: 100 APVYLENKEQIGKVDEIFGQLRDFYFS-VKLSENMKASSFKKLQKFYIDPYKLLPLQRFL 158
A V E+ E F +DF S +K+S K ++ LP +
Sbjct: 357 ATVSYEDPPTAKAAVEWFDG-KDFQGSKLKVSLARKKPPMNSMRGG-------LPPREGR 408
Query: 159 PRPPGEKGPPRGGGRGGRGGGRGG-GGRGGGRGG----GFRGGRGGGGGG 203
PP +G P GG GG GG G GGRGG RGG G RG RG GG
Sbjct: 409 GMPPPLRGGP--GGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGG 456
Score = 67.4 bits (163), Expect = 9e-12
Identities = 39/62 (62%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 157 FLPRPPGEKGPPRG-GGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG---GGF 212
FLP P G RG GG GG GGRGG GG GG FRGGRGG GGFRGGRG GGF
Sbjct: 495 FLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGF 554
Query: 213 RG 214
G
Sbjct: 555 GG 556
Score = 65.1 bits (157), Expect = 4e-11
Identities = 80/262 (30%), Positives = 97/262 (37%), Gaps = 85/262 (32%)
Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG---GGRGGFGRGGGRGG 57
M G GGF+ G G + G N RG GG GG RG GGRGG G G RGG
Sbjct: 219 MGVYGQESGGFS--GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGG 276
Query: 58 FNK---GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVD 114
FNK D+GP + LG + P ED N+ +Y++ +D
Sbjct: 277 FNKPGGPMDEGPD---LDLGPPVDPDEDS--------------DNSAIYVQGLNDSVTLD 319
Query: 115 EIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGE---------- 164
+ L DF+ K K+ K P + L + +P G+
Sbjct: 320 D----LADFF---------KQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 366
Query: 165 ------------------------KGPPRGGGRGG----RGGG-----RGGGGRGGGRGG 191
K PP RGG G G RGG G GG GG
Sbjct: 367 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGG 426
Query: 192 --GFRGGRGGGGGGF--RGGRG 209
G GGRGG GGF RG RG
Sbjct: 427 PMGRMGGRGGDRGGFPPRGPRG 448
Score = 59.3 bits (142), Expect = 2e-09
Identities = 37/62 (59%), Positives = 39/62 (62%), Gaps = 10/62 (16%)
Query: 159 PRPPGEKGPPRGGG-RGGRGG--GRGG------GGRGGGRGGGFRGGRGGGGGGFRGGRG 209
P P G++G GG RGGRGG RGG GGRGG R GGFRGGRG GGF GGR
Sbjct: 501 PPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDR-GGFRGGRGMDRGGFGGGRR 559
Query: 210 GG 211
GG
Sbjct: 560 GG 561
Score = 55.8 bits (133), Expect = 3e-08
Identities = 37/67 (55%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG---GRGGFGRGGGRGGFNK 60
RG G G RGG GG +RGG FRGG GG GG FRGG RGGFG GG RGG
Sbjct: 507 RGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG-FRGGRGMDRGGFG-GGRRGG--- 561
Query: 61 GQDQGPP 67
GPP
Sbjct: 562 --PGGPP 566
Score = 55.1 bits (131), Expect = 5e-08
Identities = 34/59 (57%), Positives = 36/59 (61%), Gaps = 12/59 (20%)
Query: 164 EKGPPRGGGRGGRGGGRGG--GGRG---GGRGGGFRGGRGGGG-------GGFRGGRGG 210
++G P G RGGRGG RGG GGRG GG GGG RGG GG GG RGGRGG
Sbjct: 524 DRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGG 582
Score = 48.9 bits (115), Expect = 3e-06
Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 15/74 (20%)
Query: 6 GGRGGF-NRGGGGGGFN--RGGSSNHFRGGGG---GGGGGNFRGGGRGG--------FGR 51
GGRGG +RGG GG F RGG FRGG G GG GG RGG G GR
Sbjct: 517 GGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGR 576
Query: 52 GGGRGGFNKGQDQG 65
GGRGG K D+G
Sbjct: 577 RGGRGGPGK-MDKG 589
Score = 47.4 bits (111), Expect = 1e-05
Identities = 30/60 (50%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF--GRGGGRGGFNKGQDQGP 66
GG GG GG RGG GG GG RGG RGGF GRG RGGF G+ GP
Sbjct: 504 GGDRGRGGPGGM-RGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGP 562
Score = 46.2 bits (108), Expect = 2e-05
Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 12/51 (23%)
Query: 163 GEKGPPRGGGRGGRGGGRG--GGGRGGGRG----------GGFRGGRGGGG 201
G +G RGG RGGRG RG GGGR GG G GG RGGRGG G
Sbjct: 534 GGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPG 584
Score = 43.9 bits (102), Expect = 1e-04
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR--GGGRGGFGRGGGRGGFNKG 61
RGG RGGF GG G +RGG RGG GG G GG RGG GG G +KG
Sbjct: 536 RGGDRGGFR---GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGG---RGGPGKMDKG 589
Query: 62 Q 62
+
Sbjct: 590 E 590
Score = 38.9 bits (89), Expect = 0.003
Identities = 31/67 (46%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Query: 159 PRPPGEKGPPRGG--GRGGRGGGRGGGGRGGGRGGGFRGG--RGGGGGGFRGGRG----- 209
P G G GG G G G RG GRGG RGG RGG GGG RGG G
Sbjct: 216 PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGG-RGGMGSAGER 274
Query: 210 GGFRGRG 216
GGF G
Sbjct: 275 GGFNKPG 281
Score = 36.6 bits (83), Expect = 0.017
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 9/45 (20%)
Query: 163 GEKGPPRGGGRGGRGGGRGG---------GGRGGGRGGGFRGGRG 198
G +G RGG GGR GG GG GGR GGRGG + +G
Sbjct: 545 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKG 589
Score = 33.1 bits (74), Expect = 0.19
Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 31/98 (31%)
Query: 1 MSFRGGGRGGF-------NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR----------- 42
M RGG RGGF +RG GG N + ++ G G NF
Sbjct: 431 MGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAP 490
Query: 43 -------------GGGRGGFGRGGGRGGFNKGQDQGPP 67
GG RG G GG RGG D+G P
Sbjct: 491 KPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGP 528
Score = 29.6 bits (65), Expect = 2.1
Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 13 RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGR--GGGRGGFNKGQDQGP 66
RGG GG GG GG GG GG G RG G GGG G Q P
Sbjct: 415 RGGPGGPGGPGGPMGRM-GGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCP 469
Score = 28.5 bits (62), Expect = 4.6
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRGGG 45
GG GG GG GG R G RGG G G GN GGG
Sbjct: 416 GGPGG--PGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGG 457
>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
sapiens]
Length = 656
Score = 70.5 bits (171), Expect = 1e-12
Identities = 79/230 (34%), Positives = 93/230 (40%), Gaps = 48/230 (20%)
Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGPP- 67
G NRG G GGF+RGG S RGG GGG GG G RGGF + GG D GPP
Sbjct: 296 GPDNRGRGRGGFDRGGMS---RGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPV 352
Query: 68 -----------------ERVVL--LGEFLHPCEDDIVCKCT---------TDENKVPYFN 99
+ V L L +F C + K T E P +
Sbjct: 353 DPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGD 412
Query: 100 APVYLENKEQIGKVDEIFGQLRDFYFS-VKLSENMKASSFKKLQKFYIDPYKLLPLQRFL 158
A V E+ E F +DF S +K+S K ++ LP +
Sbjct: 413 ATVSYEDPPTAKAAVEWFDG-KDFQGSKLKVSLARKKPPMNSMRGG-------LPPREGR 464
Query: 159 PRPPGEKGPPRGGGRGGRGGGRGG-GGRGGGRGG----GFRGGRGGGGGG 203
PP +G P GG GG GG G GGRGG RGG G RG RG GG
Sbjct: 465 GMPPPLRGGP--GGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGG 512
Score = 67.4 bits (163), Expect = 9e-12
Identities = 39/62 (62%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 157 FLPRPPGEKGPPRG-GGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG---GGF 212
FLP P G RG GG GG GGRGG GG GG FRGGRGG GGFRGGRG GGF
Sbjct: 551 FLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGF 610
Query: 213 RG 214
G
Sbjct: 611 GG 612
Score = 65.1 bits (157), Expect = 4e-11
Identities = 80/262 (30%), Positives = 97/262 (37%), Gaps = 85/262 (32%)
Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG---GGRGGFGRGGGRGG 57
M G GGF+ G G + G N RG GG GG RG GGRGG G G RGG
Sbjct: 275 MGVYGQESGGFS--GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGG 332
Query: 58 FNK---GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVD 114
FNK D+GP + LG + P ED N+ +Y++ +D
Sbjct: 333 FNKPGGPMDEGPD---LDLGPPVDPDEDS--------------DNSAIYVQGLNDSVTLD 375
Query: 115 EIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGE---------- 164
+ L DF+ K K+ K P + L + +P G+
Sbjct: 376 D----LADFF---------KQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 422
Query: 165 ------------------------KGPPRGGGRGG----RGGG-----RGGGGRGGGRGG 191
K PP RGG G G RGG G GG GG
Sbjct: 423 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGG 482
Query: 192 --GFRGGRGGGGGGF--RGGRG 209
G GGRGG GGF RG RG
Sbjct: 483 PMGRMGGRGGDRGGFPPRGPRG 504
Score = 59.3 bits (142), Expect = 2e-09
Identities = 37/62 (59%), Positives = 39/62 (62%), Gaps = 10/62 (16%)
Query: 159 PRPPGEKGPPRGGG-RGGRGG--GRGG------GGRGGGRGGGFRGGRGGGGGGFRGGRG 209
P P G++G GG RGGRGG RGG GGRGG R GGFRGGRG GGF GGR
Sbjct: 557 PPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDR-GGFRGGRGMDRGGFGGGRR 615
Query: 210 GG 211
GG
Sbjct: 616 GG 617
Score = 55.8 bits (133), Expect = 3e-08
Identities = 37/67 (55%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG---GRGGFGRGGGRGGFNK 60
RG G G RGG GG +RGG FRGG GG GG FRGG RGGFG GG RGG
Sbjct: 563 RGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG-FRGGRGMDRGGFG-GGRRGG--- 617
Query: 61 GQDQGPP 67
GPP
Sbjct: 618 --PGGPP 622
Score = 55.1 bits (131), Expect = 5e-08
Identities = 34/59 (57%), Positives = 36/59 (61%), Gaps = 12/59 (20%)
Query: 164 EKGPPRGGGRGGRGGGRGG--GGRG---GGRGGGFRGGRGGGG-------GGFRGGRGG 210
++G P G RGGRGG RGG GGRG GG GGG RGG GG GG RGGRGG
Sbjct: 580 DRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGG 638
Score = 48.9 bits (115), Expect = 3e-06
Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 15/74 (20%)
Query: 6 GGRGGF-NRGGGGGGFN--RGGSSNHFRGGGG---GGGGGNFRGGGRGG--------FGR 51
GGRGG +RGG GG F RGG FRGG G GG GG RGG G GR
Sbjct: 573 GGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGR 632
Query: 52 GGGRGGFNKGQDQG 65
GGRGG K D+G
Sbjct: 633 RGGRGGPGK-MDKG 645
Score = 47.4 bits (111), Expect = 1e-05
Identities = 30/60 (50%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF--GRGGGRGGFNKGQDQGP 66
GG GG GG RGG GG GG RGG RGGF GRG RGGF G+ GP
Sbjct: 560 GGDRGRGGPGGM-RGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGP 618
Score = 46.2 bits (108), Expect = 2e-05
Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 12/51 (23%)
Query: 163 GEKGPPRGGGRGGRGGGRG--GGGRGGGRG----------GGFRGGRGGGG 201
G +G RGG RGGRG RG GGGR GG G GG RGGRGG G
Sbjct: 590 GGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPG 640
Score = 43.9 bits (102), Expect = 1e-04
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR--GGGRGGFGRGGGRGGFNKG 61
RGG RGGF GG G +RGG RGG GG G GG RGG GG G +KG
Sbjct: 592 RGGDRGGFR---GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGG---RGGPGKMDKG 645
Query: 62 Q 62
+
Sbjct: 646 E 646
Score = 38.9 bits (89), Expect = 0.003
Identities = 31/67 (46%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Query: 159 PRPPGEKGPPRGG--GRGGRGGGRGGGGRGGGRGGGFRGG--RGGGGGGFRGGRG----- 209
P G G GG G G G RG GRGG RGG RGG GGG RGG G
Sbjct: 272 PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGG-RGGMGSAGER 330
Query: 210 GGFRGRG 216
GGF G
Sbjct: 331 GGFNKPG 337
Score = 36.6 bits (83), Expect = 0.017
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 9/45 (20%)
Query: 163 GEKGPPRGGGRGGRGGGRGG---------GGRGGGRGGGFRGGRG 198
G +G RGG GGR GG GG GGR GGRGG + +G
Sbjct: 601 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKG 645
Score = 33.1 bits (74), Expect = 0.19
Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 31/98 (31%)
Query: 1 MSFRGGGRGGF-------NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR----------- 42
M RGG RGGF +RG GG N + ++ G G NF
Sbjct: 487 MGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAP 546
Query: 43 -------------GGGRGGFGRGGGRGGFNKGQDQGPP 67
GG RG G GG RGG D+G P
Sbjct: 547 KPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGP 584
Score = 29.6 bits (65), Expect = 2.1
Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 13 RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGR--GGGRGGFNKGQDQGP 66
RGG GG GG GG GG GG G RG G GGG G Q P
Sbjct: 471 RGGPGGPGGPGGPMGRM-GGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCP 525
Score = 28.5 bits (62), Expect = 4.6
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRGGG 45
GG GG GG GG R G RGG G G GN GGG
Sbjct: 472 GGPGG--PGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGG 513
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 69.3 bits (168), Expect = 2e-12
Identities = 39/51 (76%), Positives = 40/51 (78%), Gaps = 7/51 (13%)
Query: 168 PRG-GGRGGRGGGRGG-GGRGGGRGG-GFRGGRGGGG----GGFRGGRGGG 211
P+G GG GGRGGGRGG GGRGGGRGG G GGRG GG GGFRGGRGGG
Sbjct: 647 PKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGG 697
Score = 57.4 bits (137), Expect = 9e-09
Identities = 38/62 (61%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 7 GRGGFN-RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-GRGGGRGGFNKGQDQ 64
G GGF RGGG GGF GG RGGG GG GG F G GRGGF GRGG RGG G D
Sbjct: 649 GEGGFGGRGGGRGGF--GG-----RGGGRGGRGG-FGGRGRGGFGGRGGFRGGRGGGGDH 700
Query: 65 GP 66
P
Sbjct: 701 KP 702
Score = 55.8 bits (133), Expect = 3e-08
Identities = 36/59 (61%), Positives = 37/59 (62%), Gaps = 11/59 (18%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
RGGGRGGF GG GGG RGG RGG GG G G F GGRGGF G G GG +K Q
Sbjct: 656 RGGGRGGF--GGRGGG--RGG-----RGGFGGRGRGGF--GGRGGFRGGRGGGGDHKPQ 703
Score = 38.1 bits (87), Expect = 0.006
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 14/50 (28%)
Query: 30 RGGGGGGGGGNFRG---------GGRGGF-GRG----GGRGGFNKGQDQG 65
+G GG GG G RG GGRGGF GRG GGRGGF G+ G
Sbjct: 648 KGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGG 697
Score = 31.6 bits (70), Expect = 0.54
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 12/35 (34%)
Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGG 37
F G GRGGF GG GG FRGG GGGG
Sbjct: 676 FGGRGRGGF--GGRGG----------FRGGRGGGG 698
>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
sapiens]
Length = 655
Score = 67.8 bits (164), Expect = 7e-12
Identities = 78/230 (33%), Positives = 92/230 (40%), Gaps = 49/230 (21%)
Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGPP- 67
G NRG G GGF+RGG S RGGG GG G G RGGF + GG D GPP
Sbjct: 296 GPDNRGRGRGGFDRGGMSRGGRGGGRGGMG----AGERGGFNKPGGPMDEGPDLDLGPPV 351
Query: 68 -----------------ERVVL--LGEFLHPCEDDIVCKCT---------TDENKVPYFN 99
+ V L L +F C + K T E P +
Sbjct: 352 DPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGD 411
Query: 100 APVYLENKEQIGKVDEIFGQLRDFYFS-VKLSENMKASSFKKLQKFYIDPYKLLPLQRFL 158
A V E+ E F +DF S +K+S K ++ LP +
Sbjct: 412 ATVSYEDPPTAKAAVEWFDG-KDFQGSKLKVSLARKKPPMNSMRGG-------LPPREGR 463
Query: 159 PRPPGEKGPPRGGGRGGRGGGRGG-GGRGGGRGG----GFRGGRGGGGGG 203
PP +G P GG GG GG G GGRGG RGG G RG RG GG
Sbjct: 464 GMPPPLRGGP--GGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGG 511
Score = 67.4 bits (163), Expect = 9e-12
Identities = 39/62 (62%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 157 FLPRPPGEKGPPRG-GGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG---GGF 212
FLP P G RG GG GG GGRGG GG GG FRGGRGG GGFRGGRG GGF
Sbjct: 550 FLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGF 609
Query: 213 RG 214
G
Sbjct: 610 GG 611
Score = 60.8 bits (146), Expect = 8e-10
Identities = 80/262 (30%), Positives = 97/262 (37%), Gaps = 86/262 (32%)
Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG---GGRGGFGRGGGRGG 57
M G GGF+ G G + G N RG GG GG RG GGRGG G G RGG
Sbjct: 275 MGVYGQESGGFS--GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG-AGERGG 331
Query: 58 FNK---GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVD 114
FNK D+GP + LG + P ED N+ +Y++ +D
Sbjct: 332 FNKPGGPMDEGPD---LDLGPPVDPDEDS--------------DNSAIYVQGLNDSVTLD 374
Query: 115 EIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGE---------- 164
+ L DF+ K K+ K P + L + +P G+
Sbjct: 375 D----LADFF---------KQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 421
Query: 165 ------------------------KGPPRGGGRGG----RGGG-----RGGGGRGGGRGG 191
K PP RGG G G RGG G GG GG
Sbjct: 422 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGG 481
Query: 192 --GFRGGRGGGGGGF--RGGRG 209
G GGRGG GGF RG RG
Sbjct: 482 PMGRMGGRGGDRGGFPPRGPRG 503
Score = 59.3 bits (142), Expect = 2e-09
Identities = 37/62 (59%), Positives = 39/62 (62%), Gaps = 10/62 (16%)
Query: 159 PRPPGEKGPPRGGG-RGGRGG--GRGG------GGRGGGRGGGFRGGRGGGGGGFRGGRG 209
P P G++G GG RGGRGG RGG GGRGG R GGFRGGRG GGF GGR
Sbjct: 556 PPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDR-GGFRGGRGMDRGGFGGGRR 614
Query: 210 GG 211
GG
Sbjct: 615 GG 616
Score = 55.8 bits (133), Expect = 3e-08
Identities = 37/66 (56%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG---GRGGFGRGGGRGGFNK 60
RG G G RGG GG +RGG FRGG GG GG FRGG RGGFG GG RGG
Sbjct: 562 RGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG-FRGGRGMDRGGFG-GGRRGG--P 617
Query: 61 GQDQGP 66
G GP
Sbjct: 618 GGPPGP 623
Score = 55.1 bits (131), Expect = 5e-08
Identities = 34/59 (57%), Positives = 36/59 (61%), Gaps = 12/59 (20%)
Query: 164 EKGPPRGGGRGGRGGGRGG--GGRG---GGRGGGFRGGRGGGG-------GGFRGGRGG 210
++G P G RGGRGG RGG GGRG GG GGG RGG GG GG RGGRGG
Sbjct: 579 DRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGG 637
Score = 48.9 bits (115), Expect = 3e-06
Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 15/74 (20%)
Query: 6 GGRGGF-NRGGGGGGFN--RGGSSNHFRGGGG---GGGGGNFRGGGRGG--------FGR 51
GGRGG +RGG GG F RGG FRGG G GG GG RGG G GR
Sbjct: 572 GGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGR 631
Query: 52 GGGRGGFNKGQDQG 65
GGRGG K D+G
Sbjct: 632 RGGRGGPGK-MDKG 644
Score = 47.4 bits (111), Expect = 1e-05
Identities = 30/60 (50%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF--GRGGGRGGFNKGQDQGP 66
GG GG GG RGG GG GG RGG RGGF GRG RGGF G+ GP
Sbjct: 559 GGDRGRGGPGGM-RGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGP 617
Score = 46.2 bits (108), Expect = 2e-05
Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 12/51 (23%)
Query: 163 GEKGPPRGGGRGGRGGGRG--GGGRGGGRG----------GGFRGGRGGGG 201
G +G RGG RGGRG RG GGGR GG G GG RGGRGG G
Sbjct: 589 GGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPG 639
Score = 45.8 bits (107), Expect = 3e-05
Identities = 28/55 (50%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGG-GRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G GP G R G G GRGG RGG RGGRGGG GG G GGF G
Sbjct: 284 GFSGP--GENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPG 336
Score = 43.9 bits (102), Expect = 1e-04
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR--GGGRGGFGRGGGRGGFNKG 61
RGG RGGF GG G +RGG RGG GG G GG RGG GG G +KG
Sbjct: 591 RGGDRGGFR---GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGG---RGGPGKMDKG 644
Query: 62 Q 62
+
Sbjct: 645 E 645
Score = 37.0 bits (84), Expect = 0.013
Identities = 25/54 (46%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 159 PRPPGEKGPPRGG--GRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGG 210
P G G GG G G G RG GRGG RGG GG G GGRGG
Sbjct: 272 PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRG--GGRGG 323
Score = 36.6 bits (83), Expect = 0.017
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 9/45 (20%)
Query: 163 GEKGPPRGGGRGGRGGGRGG---------GGRGGGRGGGFRGGRG 198
G +G RGG GGR GG GG GGR GGRGG + +G
Sbjct: 600 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKG 644
Score = 33.1 bits (74), Expect = 0.19
Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 31/98 (31%)
Query: 1 MSFRGGGRGGF-------NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR----------- 42
M RGG RGGF +RG GG N + ++ G G NF
Sbjct: 486 MGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAP 545
Query: 43 -------------GGGRGGFGRGGGRGGFNKGQDQGPP 67
GG RG G GG RGG D+G P
Sbjct: 546 KPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGP 583
Score = 29.6 bits (65), Expect = 2.1
Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 13 RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGR--GGGRGGFNKGQDQGP 66
RGG GG GG GG GG GG G RG G GGG G Q P
Sbjct: 470 RGGPGGPGGPGGPMGRM-GGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCP 524
Score = 28.5 bits (62), Expect = 4.6
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRGGG 45
GG GG GG GG R G RGG G G GN GGG
Sbjct: 471 GGPGG--PGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGG 512
>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
sapiens]
Length = 661
Score = 67.8 bits (164), Expect = 7e-12
Identities = 78/230 (33%), Positives = 92/230 (40%), Gaps = 49/230 (21%)
Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGPP- 67
G NRG G GGF+RGG S RGGG GG G G RGGF + GG D GPP
Sbjct: 302 GPDNRGRGRGGFDRGGMSRGGRGGGRGGMG----AGERGGFNKPGGPMDEGPDLDLGPPV 357
Query: 68 -----------------ERVVL--LGEFLHPCEDDIVCKCT---------TDENKVPYFN 99
+ V L L +F C + K T E P +
Sbjct: 358 DPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGD 417
Query: 100 APVYLENKEQIGKVDEIFGQLRDFYFS-VKLSENMKASSFKKLQKFYIDPYKLLPLQRFL 158
A V E+ E F +DF S +K+S K ++ LP +
Sbjct: 418 ATVSYEDPPTAKAAVEWFDG-KDFQGSKLKVSLARKKPPMNSMRGG-------LPPREGR 469
Query: 159 PRPPGEKGPPRGGGRGGRGGGRGG-GGRGGGRGG----GFRGGRGGGGGG 203
PP +G P GG GG GG G GGRGG RGG G RG RG GG
Sbjct: 470 GMPPPLRGGP--GGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGG 517
Score = 67.4 bits (163), Expect = 9e-12
Identities = 39/62 (62%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 157 FLPRPPGEKGPPRG-GGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG---GGF 212
FLP P G RG GG GG GGRGG GG GG FRGGRGG GGFRGGRG GGF
Sbjct: 556 FLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGF 615
Query: 213 RG 214
G
Sbjct: 616 GG 617
Score = 60.8 bits (146), Expect = 8e-10
Identities = 80/262 (30%), Positives = 97/262 (37%), Gaps = 86/262 (32%)
Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG---GGRGGFGRGGGRGG 57
M G GGF+ G G + G N RG GG GG RG GGRGG G G RGG
Sbjct: 281 MGVYGQESGGFS--GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG-AGERGG 337
Query: 58 FNK---GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVD 114
FNK D+GP + LG + P ED N+ +Y++ +D
Sbjct: 338 FNKPGGPMDEGPD---LDLGPPVDPDEDS--------------DNSAIYVQGLNDSVTLD 380
Query: 115 EIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGE---------- 164
+ L DF+ K K+ K P + L + +P G+
Sbjct: 381 D----LADFF---------KQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 427
Query: 165 ------------------------KGPPRGGGRGG----RGGG-----RGGGGRGGGRGG 191
K PP RGG G G RGG G GG GG
Sbjct: 428 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGG 487
Query: 192 --GFRGGRGGGGGGF--RGGRG 209
G GGRGG GGF RG RG
Sbjct: 488 PMGRMGGRGGDRGGFPPRGPRG 509
Score = 59.3 bits (142), Expect = 2e-09
Identities = 37/62 (59%), Positives = 39/62 (62%), Gaps = 10/62 (16%)
Query: 159 PRPPGEKGPPRGGG-RGGRGG--GRGG------GGRGGGRGGGFRGGRGGGGGGFRGGRG 209
P P G++G GG RGGRGG RGG GGRGG R GGFRGGRG GGF GGR
Sbjct: 562 PPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDR-GGFRGGRGMDRGGFGGGRR 620
Query: 210 GG 211
GG
Sbjct: 621 GG 622
Score = 55.8 bits (133), Expect = 3e-08
Identities = 37/66 (56%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG---GRGGFGRGGGRGGFNK 60
RG G G RGG GG +RGG FRGG GG GG FRGG RGGFG GG RGG
Sbjct: 568 RGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG-FRGGRGMDRGGFG-GGRRGG--P 623
Query: 61 GQDQGP 66
G GP
Sbjct: 624 GGPPGP 629
Score = 55.1 bits (131), Expect = 5e-08
Identities = 34/59 (57%), Positives = 36/59 (61%), Gaps = 12/59 (20%)
Query: 164 EKGPPRGGGRGGRGGGRGG--GGRG---GGRGGGFRGGRGGGG-------GGFRGGRGG 210
++G P G RGGRGG RGG GGRG GG GGG RGG GG GG RGGRGG
Sbjct: 585 DRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGG 643
Score = 48.9 bits (115), Expect = 3e-06
Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 15/74 (20%)
Query: 6 GGRGGF-NRGGGGGGFN--RGGSSNHFRGGGG---GGGGGNFRGGGRGG--------FGR 51
GGRGG +RGG GG F RGG FRGG G GG GG RGG G GR
Sbjct: 578 GGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGR 637
Query: 52 GGGRGGFNKGQDQG 65
GGRGG K D+G
Sbjct: 638 RGGRGGPGK-MDKG 650
Score = 47.4 bits (111), Expect = 1e-05
Identities = 30/60 (50%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF--GRGGGRGGFNKGQDQGP 66
GG GG GG RGG GG GG RGG RGGF GRG RGGF G+ GP
Sbjct: 565 GGDRGRGGPGGM-RGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGP 623
Score = 46.2 bits (108), Expect = 2e-05
Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 12/51 (23%)
Query: 163 GEKGPPRGGGRGGRGGGRG--GGGRGGGRG----------GGFRGGRGGGG 201
G +G RGG RGGRG RG GGGR GG G GG RGGRGG G
Sbjct: 595 GGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPG 645
Score = 45.8 bits (107), Expect = 3e-05
Identities = 28/55 (50%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGG-GRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G GP G R G G GRGG RGG RGGRGGG GG G GGF G
Sbjct: 290 GFSGP--GENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPG 342
Score = 43.9 bits (102), Expect = 1e-04
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR--GGGRGGFGRGGGRGGFNKG 61
RGG RGGF GG G +RGG RGG GG G GG RGG GG G +KG
Sbjct: 597 RGGDRGGFR---GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGG---RGGPGKMDKG 650
Query: 62 Q 62
+
Sbjct: 651 E 651
Score = 37.0 bits (84), Expect = 0.013
Identities = 25/54 (46%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 159 PRPPGEKGPPRGG--GRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGG 210
P G G GG G G G RG GRGG RGG GG G GGRGG
Sbjct: 278 PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRG--GGRGG 329
Score = 36.6 bits (83), Expect = 0.017
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 9/45 (20%)
Query: 163 GEKGPPRGGGRGGRGGGRGG---------GGRGGGRGGGFRGGRG 198
G +G RGG GGR GG GG GGR GGRGG + +G
Sbjct: 606 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKG 650
Score = 33.1 bits (74), Expect = 0.19
Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 31/98 (31%)
Query: 1 MSFRGGGRGGF-------NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR----------- 42
M RGG RGGF +RG GG N + ++ G G NF
Sbjct: 492 MGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAP 551
Query: 43 -------------GGGRGGFGRGGGRGGFNKGQDQGPP 67
GG RG G GG RGG D+G P
Sbjct: 552 KPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGP 589
Score = 29.6 bits (65), Expect = 2.1
Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 13 RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGR--GGGRGGFNKGQDQGP 66
RGG GG GG GG GG GG G RG G GGG G Q P
Sbjct: 476 RGGPGGPGGPGGPMGRM-GGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCP 530
Score = 28.5 bits (62), Expect = 4.6
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRGGG 45
GG GG GG GG R G RGG G G GN GGG
Sbjct: 477 GGPGG--PGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGG 518
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 64.3 bits (155), Expect = 8e-11
Identities = 37/62 (59%), Positives = 37/62 (59%), Gaps = 10/62 (16%)
Query: 4 RGGGRG-GFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGG---GRGGFN 59
RGGGRG GF G GGGGF GG GGGG GGG GGG GGFG GG G GGF
Sbjct: 82 RGGGRGSGFGGGYGGGGFGGGGF------GGGGFGGGGIGGGGFGGFGSGGGGFGGGGFG 135
Query: 60 KG 61
G
Sbjct: 136 GG 137
Score = 60.8 bits (146), Expect = 8e-10
Identities = 31/64 (48%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 5 GGGRGGFNRGGGGGG---FNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
G G G + GGGGGG + G SS +RGG GGGGGG+ G G GG GG GG +G
Sbjct: 560 GSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGG--RG 617
Query: 62 QDQG 65
G
Sbjct: 618 SSSG 621
Score = 59.7 bits (143), Expect = 2e-09
Identities = 29/53 (54%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRG----GGRGGGFRGGRGGGGGGFRGGRGGG 211
G G G G G G G GGGG G G GG+RGG GGGGGG GGRG G
Sbjct: 553 GSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSG 605
Score = 59.3 bits (142), Expect = 2e-09
Identities = 35/52 (67%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 169 RGGGRG-GRGGGRGGGGRGGGR--GGGFRGGR-GGGGGGFRGGRGGGFRGRG 216
RGGGRG G GGG GGGG GGG GGGF GG GGGG G G GGGF G G
Sbjct: 82 RGGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGG 133
Score = 59.3 bits (142), Expect = 2e-09
Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 15/72 (20%)
Query: 9 GGFNRGGGGGGFNRGGSS------NHFRGGGGGGG------GGNFRGGGRGGFGRGGGRG 56
GG +RGGGGGG+ GGSS ++ GGGGGGG GG+ G G G +G GGG G
Sbjct: 514 GGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGG 573
Query: 57 G---FNKGQDQG 65
G + G G
Sbjct: 574 GHGSYGSGSSSG 585
Score = 54.7 bits (130), Expect = 6e-08
Identities = 33/61 (54%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Query: 163 GEKGPPRGGGRGGRG--------GGRGGGGRGGGRGGGFRGGRGG-GGGGFRGGRGGGFR 213
G +G GGG GG G GG GGGG GGG GGF G GG GGGGF GG GG
Sbjct: 84 GGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGY 143
Query: 214 G 214
G
Sbjct: 144 G 144
Score = 53.5 bits (127), Expect = 1e-07
Identities = 31/54 (57%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56
+ GGG GG G GGGGF GG GG G GGGG F GGG GG G GGG G
Sbjct: 94 YGGGGFGG--GGFGGGGFGGGGIGGGGFGGFGSGGGG-FGGGGFGGGGYGGGYG 144
Score = 53.1 bits (126), Expect = 2e-07
Identities = 29/49 (59%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRG--GRGGGFRGRG 216
GG RGG GGG G GG G GGG G GGGGGG RG G GG G G
Sbjct: 515 GGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGG-RGSYGSGGSSYGSG 562
Score = 52.8 bits (125), Expect = 2e-07
Identities = 33/75 (44%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Query: 5 GGGRGGFNRGGGGGG----FNRGGSSNHFRGG----GGGGGG------GNFRGGGRGGFG 50
G G G + GGGGGG + GGSS GG GGGGGG G+ GG RGG G
Sbjct: 533 GSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSG 592
Query: 51 RGGGRGGFNKGQDQG 65
GGG +G G
Sbjct: 593 GGGGGSSGGRGSGGG 607
Score = 51.6 bits (122), Expect = 5e-07
Identities = 33/72 (45%), Positives = 33/72 (45%), Gaps = 25/72 (34%)
Query: 170 GGGR----GGRGGGRGGGG---------------------RGGGRGGGFRGGRGGGGGGF 204
GGGR GG GG G GG RGGGRG GF GG GGGG G
Sbjct: 42 GGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGG 101
Query: 205 RGGRGGGFRGRG 216
G GGGF G G
Sbjct: 102 GGFGGGGFGGGG 113
Score = 50.8 bits (120), Expect = 9e-07
Identities = 28/55 (50%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 170 GGGRGGRGG--------GRGGGGRGGGRGGGFRG--GRGGGGGGFRGGRGGGFRG 214
GGG GGRG G GGG G G GGG G G G GG+RGG GGG G
Sbjct: 543 GGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGG 597
Score = 50.1 bits (118), Expect = 1e-06
Identities = 37/86 (43%), Positives = 39/86 (45%), Gaps = 29/86 (33%)
Query: 5 GGGRGGFNRGGGGGG-------------FNRGGS-------------SNHFRG--GGGGG 36
GGG G F+ GGGGG N GGS + F G GGGG
Sbjct: 40 GGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGF 99
Query: 37 GGGNFRGGGRGGFG-RGGGRGGFNKG 61
GGG F GGG GG G GGG GGF G
Sbjct: 100 GGGGFGGGGFGGGGIGGGGFGGFGSG 125
Score = 49.3 bits (116), Expect = 3e-06
Identities = 27/51 (52%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G GG RGG GG GGGG GGRG G GG GG G RG GG + G
Sbjct: 581 GSSSGGYRGGSGG--GGGGSSGGRGSG--GGSSGGSIGGRGSSSGGVKSSG 627
Score = 49.3 bits (116), Expect = 3e-06
Identities = 23/44 (52%), Positives = 24/44 (54%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG 209
G RGG GG GG GG G GGG GG GGRG GG + G
Sbjct: 585 GGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGG 628
Score = 47.4 bits (111), Expect = 1e-05
Identities = 35/83 (42%), Positives = 37/83 (44%), Gaps = 26/83 (31%)
Query: 5 GGGRGGFNRGGGGGG---FNRGGSSN-----------------HFRGGG---GGGGGGNF 41
GGG G F GGG G N GGS + + GGG GG GGG F
Sbjct: 50 GGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGGGFGGGGF 109
Query: 42 RGGGRGGFGRGG---GRGGFNKG 61
GGG GG G GG G GGF G
Sbjct: 110 GGGGIGGGGFGGFGSGGGGFGGG 132
Score = 44.3 bits (103), Expect = 8e-05
Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNF--RGGGRGGFGRGGG 54
S+ G G RGG GGG GG S+ RG GGG GG+ RG GG GG
Sbjct: 577 SYGSGSSSGGYRGGSGGG---GGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGG 628
Score = 43.5 bits (101), Expect = 1e-04
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 2 SFRGGGR--GGFNRGGGGG-GFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56
S R G R GGF+ G G + R +S+ R GGGGG + GGG G FG GGG G
Sbjct: 6 SSRSGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFG 63
Score = 43.5 bits (101), Expect = 1e-04
Identities = 29/54 (53%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 3 FRGGGRGGFNRGGGG-GGFNRGGSSNHFRGGGGGGG-GGNFRGGGRGGFGRGGG 54
F GGG GG GGGG GGF GG GG GGGG GG GGG G GG
Sbjct: 104 FGGGGFGGGGIGGGGFGGFGSGG------GGFGGGGFGGGGYGGGYGPVCPPGG 151
Score = 40.8 bits (94), Expect = 9e-04
Identities = 20/35 (57%), Positives = 20/35 (57%)
Query: 177 GGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211
GGG GGG GG GG G GGG G GG GGG
Sbjct: 514 GGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGG 548
Score = 39.7 bits (91), Expect = 0.002
Identities = 34/102 (33%), Positives = 39/102 (38%), Gaps = 41/102 (40%)
Query: 1 MSFRGGGRGGFNRGGGGGGFNRG----------GSSNHFRGGGG-----GGGGGNF---- 41
MS + R G+ GGG + G S+ GGGG GGGGG+F
Sbjct: 1 MSRQFSSRSGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGG 60
Query: 42 ---------------------RGGGRG-GFGRGGGRGGFNKG 61
RGGGRG GFG G G GGF G
Sbjct: 61 GFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGG 102
Score = 34.7 bits (78), Expect = 0.064
Identities = 24/60 (40%), Positives = 24/60 (40%), Gaps = 15/60 (25%)
Query: 169 RGGGRGGRGGGRGGGG-------------RGGGRGGGFRGGRGGGGGGFRGGRGGGFRGR 215
R G R G G G G R G GGG GGGGG F G GGGF R
Sbjct: 8 RSGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSF--GAGGGFGSR 65
Score = 32.3 bits (72), Expect = 0.32
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 25 SSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65
S++H GGG GG G G GG G G G + G G
Sbjct: 506 STSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGG 546
Score = 28.9 bits (63), Expect = 3.5
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 11/52 (21%)
Query: 176 RGGGRGGGGRGGGRGGGFRGGR----------GGGGGGFRG-GRGGGFRGRG 216
R G R GGG G G R GGGGG F G GGG G G
Sbjct: 8 RSGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAG 59
Score = 27.7 bits (60), Expect = 7.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR 42
GG GG GGG G + GG + G GG + +
Sbjct: 596 GGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSSSVK 633
>gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo
sapiens]
Length = 378
Score = 60.8 bits (146), Expect = 8e-10
Identities = 33/51 (64%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 169 RGGGRG---GRGGGRGGGGRGGGRGGGF--RGGRGGGGGGFRGGRGGGFRG 214
RGGG G GRGG GGGG GRGG F RGG GGGGGG RG GGG G
Sbjct: 216 RGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGG 266
Score = 59.3 bits (142), Expect = 2e-09
Identities = 38/73 (52%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 4 RGGGRGGF-----NRGGGGGGFNRGGSSNHFRGGGGGGGGGN--FRGGGRGGFGRGGGRG 56
RGGG G F N GGGGG F RGG+ RGG GGGGGG+ GGG GG+ GG G
Sbjct: 216 RGGGSGNFMGRGGNFGGGGGNFGRGGNFGG-RGGYGGGGGGSRGSYGGGDGGYNGFGGDG 274
Query: 57 GFNKGQDQGPPER 69
G N G G R
Sbjct: 275 G-NYGGGPGYSSR 286
Score = 58.9 bits (141), Expect = 3e-09
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64
GGG GG+N GG GG GG RGG GGGG G G GG+G GGG G+N+G +
Sbjct: 261 GGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPG--YGNQGGGYGGGGGYDGYNEGGNF 318
Query: 65 G 65
G
Sbjct: 319 G 319
Score = 54.3 bits (129), Expect = 8e-08
Identities = 27/47 (57%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFR--GGRGGGFRG 214
GGG GRGG GG G GG GGG RG GGG GG+ GG GG + G
Sbjct: 233 GGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGG 279
Score = 53.5 bits (127), Expect = 1e-07
Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 163 GEKGPPRGGGRGGRGGGRGG----GGRGGGRGGG----FRGGRGGGGGGFRGGRGGGFRG 214
G G GG RG GGG GG GG GG GGG RGG GGGG G+ G +GGG+ G
Sbjct: 247 GGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGY-GNQGGGYGG 305
Query: 215 RG 216
G
Sbjct: 306 GG 307
Score = 52.4 bits (124), Expect = 3e-07
Identities = 30/55 (54%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 10 GFNRGGGGGGFNRGGSSNHFRGGGGG-GGGGNFRGGGRGGFGRGGG--RGGFNKG 61
G RG GGG N G +F GGGG G GGNF GGRGG+G GGG RG + G
Sbjct: 211 GSQRGRGGGSGNFMGRGGNFGGGGGNFGRGGNF--GGRGGYGGGGGGSRGSYGGG 263
Score = 51.2 bits (121), Expect = 7e-07
Identities = 30/53 (56%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 169 RGGGRGGRGGGRG--GGGRGGGRGGGFRGGRGGGGGGF--RGGRGGGFRGRGH 217
RGG GG GG RG GGG GG G G GG GGG G+ RGG GGG G G+
Sbjct: 246 RGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGN 298
Score = 48.1 bits (113), Expect = 6e-06
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 29/85 (34%)
Query: 3 FRGGGRGGFNRGGG---GGGFNRGGSSNHFRGGGGGGGG-----GNFRG----------- 43
+ GGG G N+GGG GGG++ +F GG GGGG GN+ G
Sbjct: 289 YGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKG 348
Query: 44 ---GGR-------GGFGRGGGRGGF 58
GGR GG+G GGG GG+
Sbjct: 349 GSFGGRSSGSPYGGGYGSGGGSGGY 373
Score = 47.8 bits (112), Expect = 7e-06
Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 5 GGGRGGFNRGG-GGGGFNRGGSSNHFRGGGGGGG---GGNFRGGGRGGFGRGGGRGGFNK 60
GGG G +RGG GGGG G + GGGG G GGNF GG GG G G ++
Sbjct: 278 GGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYS- 336
Query: 61 GQDQ 64
GQ Q
Sbjct: 337 GQQQ 340
Score = 45.4 bits (106), Expect = 4e-05
Identities = 26/52 (50%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 170 GGGRGGRGGGRG----GGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217
GG G GGG G GG GGG G G +GG GGGGG+ G GG G G+
Sbjct: 271 GGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGN 322
Score = 43.1 bits (100), Expect = 2e-04
Identities = 25/46 (54%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
Query: 22 RGGSSNHFRGGGGG---GGGGNFRGGGRGGFGRG---GGRGGFNKG 61
+ S RGGG G G GGNF GGG G FGRG GGRGG+ G
Sbjct: 208 QSAGSQRGRGGGSGNFMGRGGNF-GGGGGNFGRGGNFGGRGGYGGG 252
Score = 43.1 bits (100), Expect = 2e-04
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 23/69 (33%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNH----------------FRGGGGGG-------GGGNF 41
GGG G+N GG GG N GG N+ +GG GG GGG
Sbjct: 306 GGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYG 365
Query: 42 RGGGRGGFG 50
GGG GG+G
Sbjct: 366 SGGGSGGYG 374
Score = 42.4 bits (98), Expect = 3e-04
Identities = 27/55 (49%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 163 GEKGPPRGGGRG-GRGGGRGGGGRG-GGRGGGFRGGRG----GGGGGFRGGRGGG 211
G G GGG G GG GGGG G G +GGG+ GG G GG F GG GG
Sbjct: 271 GGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGG 325
Score = 41.2 bits (95), Expect = 7e-04
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRG-GRGGGGGGFRGGRGGGFRGRGH 217
G G GG GG G G G G G G GGG+ G GG GG G GG + G+
Sbjct: 279 GGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGN 334
Score = 40.0 bits (92), Expect = 0.002
Identities = 22/34 (64%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 184 GRGGGRGGGF-RGGRGGGGGGFRGGRGGGFRGRG 216
GRGGG G RGG GGGGG GRGG F GRG
Sbjct: 215 GRGGGSGNFMGRGGNFGGGGG-NFGRGGNFGGRG 247
Score = 35.0 bits (79), Expect = 0.049
Identities = 29/81 (35%), Positives = 33/81 (40%), Gaps = 29/81 (35%)
Query: 163 GEKGPPRGGGRG----GRGGGRGGGGRGGG--------------------RGGGFRGGRG 198
G +G GGG G GG GGG GGG +GG F GGR
Sbjct: 297 GNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSF-GGRS 355
Query: 199 GG---GGGF-RGGRGGGFRGR 215
G GGG+ GG GG+ R
Sbjct: 356 SGSPYGGGYGSGGGSGGYGSR 376
Score = 33.1 bits (74), Expect = 0.19
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 33 GGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65
G GGG GNF G G G FG GGG F +G + G
Sbjct: 215 GRGGGSGNFMGRG-GNFGGGGGN--FGRGGNFG 244
Score = 31.6 bits (70), Expect = 0.54
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 9/43 (20%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGR 208
GP +GG GGR G GGG+ G GGG GG+ R
Sbjct: 344 GPMKGGSFGGRSSG-------SPYGGGY--GSGGGSGGYGSRR 377
>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
Length = 589
Score = 60.5 bits (145), Expect = 1e-09
Identities = 35/61 (57%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Query: 163 GEKGPPRGGGRGG--RGGGRGG---GGRGGGRGGGFRGGRGGGGGGFRGG----RGGGFR 213
G G GGG GG GGG GG GG GG RGGG+ G RGGG GG RGG RGGG+
Sbjct: 433 GYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYG 492
Query: 214 G 214
G
Sbjct: 493 G 493
Score = 60.5 bits (145), Expect = 1e-09
Identities = 34/60 (56%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRG---GGFRGGRGGGGGGFRGGRGGGFRGRG 216
R G G RGGG GG GG GG RGGG G GG+ G RGGG GG RGG GG G G
Sbjct: 447 RSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYG 506
Score = 58.5 bits (140), Expect = 4e-09
Identities = 35/57 (61%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 163 GEKGPPRGGGRGG-RGGGRGG--GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G G RGGG GG RGGG GG GG GG RGGG+ G RGG GG RGG GG G G
Sbjct: 458 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGD-RGGYGGDRGGYG 513
Score = 58.2 bits (139), Expect = 5e-09
Identities = 33/69 (47%), Positives = 35/69 (50%), Gaps = 20/69 (28%)
Query: 169 RGGGRGGRGGGRGGGGRGGGR--------------------GGGFRGGRGGGGGGFRGGR 208
RGG RGG GG R GGG GG R GGG+ G RGGG GG RGG
Sbjct: 408 RGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG 467
Query: 209 GGGFRGRGH 217
GG RG G+
Sbjct: 468 YGGDRGGGY 476
Score = 58.2 bits (139), Expect = 5e-09
Identities = 33/59 (55%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG--RGGGRGGFNKG 61
GGG GG +R GGG G +RGG RGGG GG G GG RGG+G RGGG GG G
Sbjct: 440 GGGYGG-DRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGG 497
Score = 58.2 bits (139), Expect = 5e-09
Identities = 34/58 (58%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRG--GGFRGGRGGGGGGFRGGRG--GGFRGRG 216
G++G GG RGG GG R GGG GG RG GG RGG GG GG+ G RG GG R RG
Sbjct: 470 GDRGGGYGGDRGGYGGDR-GGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRG 526
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/65 (50%), Positives = 37/65 (56%), Gaps = 13/65 (20%)
Query: 163 GEKGPPRGGGRGGR----GGGRGGGGRGGGR--GGGFRGGRGGG-------GGGFRGGRG 209
GE+G GGRGG GG R GGG GG R GGG+ G R GG GGG+ G RG
Sbjct: 398 GERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRG 457
Query: 210 GGFRG 214
GG+ G
Sbjct: 458 GGYGG 462
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/58 (56%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 163 GEKGPPRGGGRGG-RGGGRGG---GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G G GGG GG RGGG GG GG GG RGGG+ G RGG GG GG GG G G
Sbjct: 442 GYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYG 499
Score = 56.2 bits (134), Expect = 2e-08
Identities = 31/56 (55%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGR 215
R G G RGGG G GG R GG G GGG+ G RGGG GG RGG GG GR
Sbjct: 523 RSRGGYGGDRGGG-SGYGGDRSGGYGGDRSGGGYGGDRGGGYGGDRGGYGGKMGGR 577
Score = 55.8 bits (133), Expect = 3e-08
Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 10/67 (14%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-----GRGGGRGGF 58
RGGG GG +RGGG GG +RGG RGG GG GG + GG RGG+ G GG RGG+
Sbjct: 456 RGGGYGG-DRGGGYGG-DRGGGYGGDRGGYGGDRGGGY-GGDRGGYGGDRGGYGGDRGGY 512
Query: 59 NKGQDQG 65
G D+G
Sbjct: 513 --GGDRG 517
Score = 55.8 bits (133), Expect = 3e-08
Identities = 34/59 (57%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 163 GEKGPPRGG-----GRGGRGGGRGGG-GRGGGRGGGFRGGRGGGG-GGFRGGRGGGFRG 214
G G RGG RGG GG RGGG G GG R GG+ G R GGG GG RGG GG RG
Sbjct: 510 GGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGYGGDRG 568
Score = 55.1 bits (131), Expect = 5e-08
Identities = 32/61 (52%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64
GGG G GGG GG GG RGGG GG G GG RGG G GG RGG+ G D+
Sbjct: 431 GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGG-GYGGDRGGY--GGDR 487
Query: 65 G 65
G
Sbjct: 488 G 488
Score = 55.1 bits (131), Expect = 5e-08
Identities = 31/64 (48%), Positives = 35/64 (54%), Gaps = 12/64 (18%)
Query: 163 GEKGPPRGGGRGGRGGGRGG-----GGRGGGRGG-------GFRGGRGGGGGGFRGGRGG 210
G++G GG RGG GG RGG GG GG RGG G GG GGG G+ G R G
Sbjct: 485 GDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG 544
Query: 211 GFRG 214
G+ G
Sbjct: 545 GYGG 548
Score = 54.3 bits (129), Expect = 8e-08
Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64
GGG GG +RGGG GG +RGG RGGG GG G + GG RGG G GG RGG+ G D+
Sbjct: 449 GGGYGG-DRGGGYGG-DRGGGYGGDRGGGYGGDRGGY-GGDRGG-GYGGDRGGY--GGDR 502
Query: 65 G 65
G
Sbjct: 503 G 503
Score = 53.1 bits (126), Expect = 2e-07
Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 9/67 (13%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-----GRGGGRGGF 58
RGGG GG +RGGG GG +RGG RGGG GG G + GG RGG+ G GG RGG+
Sbjct: 464 RGGGYGG-DRGGGYGG-DRGGYGGD-RGGGYGGDRGGY-GGDRGGYGGDRGGYGGDRGGY 519
Query: 59 NKGQDQG 65
+ +G
Sbjct: 520 GGDRSRG 526
Score = 53.1 bits (126), Expect = 2e-07
Identities = 34/62 (54%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 163 GEKGPPRGGGRGGRGGGRGG--GGRGGGRG--GGFRGGRGGGGGGFRGGRG----GGFRG 214
G G RGG G RGGG GG GG GG RG GG RGG GG GG+ G R GG RG
Sbjct: 474 GGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRG 533
Query: 215 RG 216
G
Sbjct: 534 GG 535
Score = 52.4 bits (124), Expect = 3e-07
Identities = 30/59 (50%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 159 PRPPGEK---GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
PRP + G RG G GG G RG GGRGG R GG+ G R GGG G GGG+ G
Sbjct: 379 PRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDR-GGYGGDRSGGGYGGDRSSGGGYSG 436
Score = 51.2 bits (121), Expect = 7e-07
Identities = 37/75 (49%), Positives = 42/75 (56%), Gaps = 14/75 (18%)
Query: 4 RGGGRGGF--NRGGGGGGFNR--GGSSNHFRGGGG------GGGGGNFRGGGRGGF---G 50
RGG RGG+ +R GGG G +R GG + R GGG GGG G RGGG GG G
Sbjct: 408 RGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG 467
Query: 51 RGGGRGGFNKGQDQG 65
GG RGG G D+G
Sbjct: 468 YGGDRGG-GYGGDRG 481
Score = 50.4 bits (119), Expect = 1e-06
Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 5 GGGRGGFNRGGGGGGFNRGG-SSNHFRGG-GGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
GG RGG+ GG G +RGG + RGG GG GGG+ GG R G G GG R G G
Sbjct: 499 GGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG-GYGGDRSGGGYGG 557
Query: 63 DQG 65
D+G
Sbjct: 558 DRG 560
Score = 50.4 bits (119), Expect = 1e-06
Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 5 GGGRGGF--NRGGGGGGFNRGGSSNHFRGGGGGGG------GGNFRGGGRGGFGRGGGRG 56
GG RGG+ +RGG GG +RGG GG G GG GG+ GGG GG RGGG G
Sbjct: 506 GGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGG-DRGGGYG 564
Query: 57 GFNKG 61
G G
Sbjct: 565 GDRGG 569
Score = 50.1 bits (118), Expect = 1e-06
Identities = 33/63 (52%), Positives = 39/63 (61%), Gaps = 8/63 (12%)
Query: 5 GGGRGGF--NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
GG RGG+ +RGGG GG +RGG RGG GG GG GG RGG+G RGG+ G
Sbjct: 477 GGDRGGYGGDRGGGYGG-DRGGYGGD-RGGYGGDRGG--YGGDRGGYGGDRSRGGY--GG 530
Query: 63 DQG 65
D+G
Sbjct: 531 DRG 533
Score = 48.5 bits (114), Expect = 4e-06
Identities = 32/66 (48%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGG----GGGGNFRGGGRG-GFGRGGGRGGFN 59
GG RGG+ GG G +RGG RGG GG GG G RGGG G G R GG GG
Sbjct: 492 GGDRGGYGGDRGGYGGDRGGYGGD-RGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDR 550
Query: 60 KGQDQG 65
G G
Sbjct: 551 SGGGYG 556
Score = 47.8 bits (112), Expect = 7e-06
Identities = 35/76 (46%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 3 FRGGGRGGFN--RGGGGGGFNRGGSSNHFRGGG-------GGGGGGNFRGGG----RGGF 49
FRG G GG RG GG G +RGG GGG GGG G+ GGG R G
Sbjct: 391 FRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGG 450
Query: 50 GRGGGRGGFNKGQDQG 65
G GG RGG G D+G
Sbjct: 451 GYGGDRGG-GYGGDRG 465
Score = 47.8 bits (112), Expect = 7e-06
Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGG--GGNFRGGGRGGF-GRGGGRGGFNKGQ 62
GG GG GG G G +R G R GGG GG GG + GG RGG+ G+ GGR + Q
Sbjct: 526 GGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGY-GGDRGGYGGKMGGRNDYRNDQ 584
Query: 63 DQGP 66
P
Sbjct: 585 RNRP 588
Score = 46.6 bits (109), Expect = 2e-05
Identities = 26/58 (44%), Positives = 27/58 (46%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
RGGG GG G GG GG + G GG GG RGG G G G G GG G
Sbjct: 487 RGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG 544
Score = 43.9 bits (102), Expect = 1e-04
Identities = 77/278 (27%), Positives = 94/278 (33%), Gaps = 90/278 (32%)
Query: 9 GGFNRGGGG---GGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQD-- 63
G NRG GG GG RGG RG G GG+ RGGF GG + D
Sbjct: 168 GEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGD-----RGGFKNFGGHRDYGPRTDAD 222
Query: 64 -------------QGPPERVVL--LGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKE 108
QG E V +GEF I T + P N + +
Sbjct: 223 SESDNSDNNTIFVQGLGEGVSTDQVGEFFK----QIGIIKTNKKTGKPMINLYTDKDTGK 278
Query: 109 QIGKVDEIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPP 168
G+ F ++ + ++F+ + K+ R RP +G
Sbjct: 279 PKGEATVSFDDPPSAKAAIDWFDG---------KEFHGNIIKVSFATR---RPEFMRGGG 326
Query: 169 RGGGRGGRGGGRGGG---GRGG-------------------------------------- 187
GGGR GRGG RG G GRGG
Sbjct: 327 SGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRP 386
Query: 188 ------GRG-GGFRGGRG-GGGGGFRGGRGGGFRGRGH 217
GRG GG RG RG GG GG RGG GG G G+
Sbjct: 387 SGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGY 424
Score = 42.4 bits (98), Expect = 3e-04
Identities = 27/54 (50%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 164 EKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG-GGFRGRG 216
E P GG GRG GG G RG G RGG GG GG R G G GG R G
Sbjct: 378 EPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSG 431
Score = 38.1 bits (87), Expect = 0.006
Identities = 34/100 (34%), Positives = 37/100 (37%), Gaps = 38/100 (38%)
Query: 4 RGGGRGGFNRGGGG----GGFN-RGGSS--------------------------NHFRGG 32
RGGG GG RG GG GGF RGG N R
Sbjct: 323 RGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPE 382
Query: 33 GGGGGGGNFRGGGRGGF-------GRGGGRGGFNKGQDQG 65
GG+FRG G GG GRGG RGG+ + G
Sbjct: 383 DSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGG 422
Score = 37.0 bits (84), Expect = 0.013
Identities = 57/223 (25%), Positives = 79/223 (35%), Gaps = 67/223 (30%)
Query: 21 NRGGSSNHFRGG--GGGGGGGNFRGGGRGGF--GRGGGRGGFNK---GQDQGPPERVVLL 73
+R G N GG GGG G G + GRG GG RGGF +D GP
Sbjct: 165 SRYGEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGDRGGFKNFGGHRDYGP------- 217
Query: 74 GEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQLRDFYFSVKLSENM 133
+ D N ++++ + D Q+ +F+ + + +
Sbjct: 218 -------------RTDADSESDNSDNNTIFVQGLGEGVSTD----QVGEFFKQIGIIKTN 260
Query: 134 KASSFKKLQKFYIDPYKLLPLQRFLPRPPGE-----KGPPRGGGRGGRGGGRGGGG---- 184
K + K + Y D + +P GE PP G+ G
Sbjct: 261 KKTG-KPMINLYTD--------KDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFHGNIIK 311
Query: 185 -----------RGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
RGGG GGG R G GG+RG GGF+GRG
Sbjct: 312 VSFATRRPEFMRGGGSGGGRR-----GRGGYRG--RGGFQGRG 347
Score = 36.6 bits (83), Expect = 0.017
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGG--GGGGNFRGGGR 46
R GG GG GGG GG +RGG RGG GG GG ++R R
Sbjct: 542 RSGGYGGDRSGGGYGG-DRGGGYGGDRGGYGGKMGGRNDYRNDQR 585
>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
Length = 592
Score = 60.5 bits (145), Expect = 1e-09
Identities = 35/61 (57%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Query: 163 GEKGPPRGGGRGG--RGGGRGG---GGRGGGRGGGFRGGRGGGGGGFRGG----RGGGFR 213
G G GGG GG GGG GG GG GG RGGG+ G RGGG GG RGG RGGG+
Sbjct: 436 GYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYG 495
Query: 214 G 214
G
Sbjct: 496 G 496
Score = 60.5 bits (145), Expect = 1e-09
Identities = 34/60 (56%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRG---GGFRGGRGGGGGGFRGGRGGGFRGRG 216
R G G RGGG GG GG GG RGGG G GG+ G RGGG GG RGG GG G G
Sbjct: 450 RSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYG 509
Score = 58.5 bits (140), Expect = 4e-09
Identities = 35/57 (61%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 163 GEKGPPRGGGRGG-RGGGRGG--GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G G RGGG GG RGGG GG GG GG RGGG+ G RGG GG RGG GG G G
Sbjct: 461 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGD-RGGYGGDRGGYG 516
Score = 58.2 bits (139), Expect = 5e-09
Identities = 33/69 (47%), Positives = 35/69 (50%), Gaps = 20/69 (28%)
Query: 169 RGGGRGGRGGGRGGGGRGGGR--------------------GGGFRGGRGGGGGGFRGGR 208
RGG RGG GG R GGG GG R GGG+ G RGGG GG RGG
Sbjct: 411 RGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG 470
Query: 209 GGGFRGRGH 217
GG RG G+
Sbjct: 471 YGGDRGGGY 479
Score = 58.2 bits (139), Expect = 5e-09
Identities = 33/59 (55%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG--RGGGRGGFNKG 61
GGG GG +R GGG G +RGG RGGG GG G GG RGG+G RGGG GG G
Sbjct: 443 GGGYGG-DRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGG 500
Score = 58.2 bits (139), Expect = 5e-09
Identities = 34/58 (58%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRG--GGFRGGRGGGGGGFRGGRG--GGFRGRG 216
G++G GG RGG GG R GGG GG RG GG RGG GG GG+ G RG GG R RG
Sbjct: 473 GDRGGGYGGDRGGYGGDR-GGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRG 529
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/65 (50%), Positives = 37/65 (56%), Gaps = 13/65 (20%)
Query: 163 GEKGPPRGGGRGGR----GGGRGGGGRGGGR--GGGFRGGRGGG-------GGGFRGGRG 209
GE+G GGRGG GG R GGG GG R GGG+ G R GG GGG+ G RG
Sbjct: 401 GERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRG 460
Query: 210 GGFRG 214
GG+ G
Sbjct: 461 GGYGG 465
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/58 (56%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 163 GEKGPPRGGGRGG-RGGGRGG---GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G G GGG GG RGGG GG GG GG RGGG+ G RGG GG GG GG G G
Sbjct: 445 GYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYG 502
Score = 56.2 bits (134), Expect = 2e-08
Identities = 31/56 (55%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGR 215
R G G RGGG G GG R GG G GGG+ G RGGG GG RGG GG GR
Sbjct: 526 RSRGGYGGDRGGG-SGYGGDRSGGYGGDRSGGGYGGDRGGGYGGDRGGYGGKMGGR 580
Score = 55.8 bits (133), Expect = 3e-08
Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 10/67 (14%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-----GRGGGRGGF 58
RGGG GG +RGGG GG +RGG RGG GG GG + GG RGG+ G GG RGG+
Sbjct: 459 RGGGYGG-DRGGGYGG-DRGGGYGGDRGGYGGDRGGGY-GGDRGGYGGDRGGYGGDRGGY 515
Query: 59 NKGQDQG 65
G D+G
Sbjct: 516 --GGDRG 520
Score = 55.8 bits (133), Expect = 3e-08
Identities = 34/59 (57%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 163 GEKGPPRGG-----GRGGRGGGRGGG-GRGGGRGGGFRGGRGGGG-GGFRGGRGGGFRG 214
G G RGG RGG GG RGGG G GG R GG+ G R GGG GG RGG GG RG
Sbjct: 513 GGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGYGGDRG 571
Score = 55.1 bits (131), Expect = 5e-08
Identities = 32/61 (52%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64
GGG G GGG GG GG RGGG GG G GG RGG G GG RGG+ G D+
Sbjct: 434 GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGG-GYGGDRGGY--GGDR 490
Query: 65 G 65
G
Sbjct: 491 G 491
Score = 55.1 bits (131), Expect = 5e-08
Identities = 31/64 (48%), Positives = 35/64 (54%), Gaps = 12/64 (18%)
Query: 163 GEKGPPRGGGRGGRGGGRGG-----GGRGGGRGG-------GFRGGRGGGGGGFRGGRGG 210
G++G GG RGG GG RGG GG GG RGG G GG GGG G+ G R G
Sbjct: 488 GDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG 547
Query: 211 GFRG 214
G+ G
Sbjct: 548 GYGG 551
Score = 54.3 bits (129), Expect = 8e-08
Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64
GGG GG +RGGG GG +RGG RGGG GG G + GG RGG G GG RGG+ G D+
Sbjct: 452 GGGYGG-DRGGGYGG-DRGGGYGGDRGGGYGGDRGGY-GGDRGG-GYGGDRGGY--GGDR 505
Query: 65 G 65
G
Sbjct: 506 G 506
Score = 53.1 bits (126), Expect = 2e-07
Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 9/67 (13%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-----GRGGGRGGF 58
RGGG GG +RGGG GG +RGG RGGG GG G + GG RGG+ G GG RGG+
Sbjct: 467 RGGGYGG-DRGGGYGG-DRGGYGGD-RGGGYGGDRGGY-GGDRGGYGGDRGGYGGDRGGY 522
Query: 59 NKGQDQG 65
+ +G
Sbjct: 523 GGDRSRG 529
Score = 53.1 bits (126), Expect = 2e-07
Identities = 34/62 (54%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 163 GEKGPPRGGGRGGRGGGRGG--GGRGGGRG--GGFRGGRGGGGGGFRGGRG----GGFRG 214
G G RGG G RGGG GG GG GG RG GG RGG GG GG+ G R GG RG
Sbjct: 477 GGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRG 536
Query: 215 RG 216
G
Sbjct: 537 GG 538
Score = 52.4 bits (124), Expect = 3e-07
Identities = 30/59 (50%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 159 PRPPGEK---GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
PRP + G RG G GG G RG GGRGG R GG+ G R GGG G GGG+ G
Sbjct: 382 PRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDR-GGYGGDRSGGGYGGDRSSGGGYSG 439
Score = 51.2 bits (121), Expect = 7e-07
Identities = 37/75 (49%), Positives = 42/75 (56%), Gaps = 14/75 (18%)
Query: 4 RGGGRGGF--NRGGGGGGFNR--GGSSNHFRGGGG------GGGGGNFRGGGRGGF---G 50
RGG RGG+ +R GGG G +R GG + R GGG GGG G RGGG GG G
Sbjct: 411 RGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG 470
Query: 51 RGGGRGGFNKGQDQG 65
GG RGG G D+G
Sbjct: 471 YGGDRGG-GYGGDRG 484
Score = 50.4 bits (119), Expect = 1e-06
Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 5 GGGRGGFNRGGGGGGFNRGG-SSNHFRGG-GGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
GG RGG+ GG G +RGG + RGG GG GGG+ GG R G G GG R G G
Sbjct: 502 GGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG-GYGGDRSGGGYGG 560
Query: 63 DQG 65
D+G
Sbjct: 561 DRG 563
Score = 50.4 bits (119), Expect = 1e-06
Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 5 GGGRGGF--NRGGGGGGFNRGGSSNHFRGGGGGGG------GGNFRGGGRGGFGRGGGRG 56
GG RGG+ +RGG GG +RGG GG G GG GG+ GGG GG RGGG G
Sbjct: 509 GGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGG-DRGGGYG 567
Query: 57 GFNKG 61
G G
Sbjct: 568 GDRGG 572
Score = 50.1 bits (118), Expect = 1e-06
Identities = 33/63 (52%), Positives = 39/63 (61%), Gaps = 8/63 (12%)
Query: 5 GGGRGGF--NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
GG RGG+ +RGGG GG +RGG RGG GG GG GG RGG+G RGG+ G
Sbjct: 480 GGDRGGYGGDRGGGYGG-DRGGYGGD-RGGYGGDRGG--YGGDRGGYGGDRSRGGY--GG 533
Query: 63 DQG 65
D+G
Sbjct: 534 DRG 536
Score = 48.5 bits (114), Expect = 4e-06
Identities = 32/66 (48%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGG----GGGGNFRGGGRG-GFGRGGGRGGFN 59
GG RGG+ GG G +RGG RGG GG GG G RGGG G G R GG GG
Sbjct: 495 GGDRGGYGGDRGGYGGDRGGYGGD-RGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDR 553
Query: 60 KGQDQG 65
G G
Sbjct: 554 SGGGYG 559
Score = 47.8 bits (112), Expect = 7e-06
Identities = 35/76 (46%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 3 FRGGGRGGFN--RGGGGGGFNRGGSSNHFRGGG-------GGGGGGNFRGGG----RGGF 49
FRG G GG RG GG G +RGG GGG GGG G+ GGG R G
Sbjct: 394 FRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGG 453
Query: 50 GRGGGRGGFNKGQDQG 65
G GG RGG G D+G
Sbjct: 454 GYGGDRGG-GYGGDRG 468
Score = 47.8 bits (112), Expect = 7e-06
Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGG--GGNFRGGGRGGF-GRGGGRGGFNKGQ 62
GG GG GG G G +R G R GGG GG GG + GG RGG+ G+ GGR + Q
Sbjct: 529 GGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGY-GGDRGGYGGKMGGRNDYRNDQ 587
Query: 63 DQGP 66
P
Sbjct: 588 RNRP 591
Score = 46.6 bits (109), Expect = 2e-05
Identities = 26/58 (44%), Positives = 27/58 (46%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
RGGG GG G GG GG + G GG GG RGG G G G G GG G
Sbjct: 490 RGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG 547
Score = 43.9 bits (102), Expect = 1e-04
Identities = 77/278 (27%), Positives = 94/278 (33%), Gaps = 90/278 (32%)
Query: 9 GGFNRGGGG---GGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQD-- 63
G NRG GG GG RGG RG G GG+ RGGF GG + D
Sbjct: 171 GEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGD-----RGGFKNFGGHRDYGPRTDAD 225
Query: 64 -------------QGPPERVVL--LGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKE 108
QG E V +GEF I T + P N + +
Sbjct: 226 SESDNSDNNTIFVQGLGEGVSTDQVGEFFK----QIGIIKTNKKTGKPMINLYTDKDTGK 281
Query: 109 QIGKVDEIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPP 168
G+ F ++ + ++F+ + K+ R RP +G
Sbjct: 282 PKGEATVSFDDPPSAKAAIDWFDG---------KEFHGNIIKVSFATR---RPEFMRGGG 329
Query: 169 RGGGRGGRGGGRGGG---GRGG-------------------------------------- 187
GGGR GRGG RG G GRGG
Sbjct: 330 SGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRP 389
Query: 188 ------GRG-GGFRGGRG-GGGGGFRGGRGGGFRGRGH 217
GRG GG RG RG GG GG RGG GG G G+
Sbjct: 390 SGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGY 427
Score = 42.4 bits (98), Expect = 3e-04
Identities = 27/54 (50%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 164 EKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG-GGFRGRG 216
E P GG GRG GG G RG G RGG GG GG R G G GG R G
Sbjct: 381 EPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSG 434
Score = 38.1 bits (87), Expect = 0.006
Identities = 34/100 (34%), Positives = 37/100 (37%), Gaps = 38/100 (38%)
Query: 4 RGGGRGGFNRGGGG----GGFN-RGGSS--------------------------NHFRGG 32
RGGG GG RG GG GGF RGG N R
Sbjct: 326 RGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPE 385
Query: 33 GGGGGGGNFRGGGRGGF-------GRGGGRGGFNKGQDQG 65
GG+FRG G GG GRGG RGG+ + G
Sbjct: 386 DSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGG 425
Score = 37.0 bits (84), Expect = 0.013
Identities = 57/223 (25%), Positives = 79/223 (35%), Gaps = 67/223 (30%)
Query: 21 NRGGSSNHFRGG--GGGGGGGNFRGGGRGGF--GRGGGRGGFNK---GQDQGPPERVVLL 73
+R G N GG GGG G G + GRG GG RGGF +D GP
Sbjct: 168 SRYGEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGDRGGFKNFGGHRDYGP------- 220
Query: 74 GEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQLRDFYFSVKLSENM 133
+ D N ++++ + D Q+ +F+ + + +
Sbjct: 221 -------------RTDADSESDNSDNNTIFVQGLGEGVSTD----QVGEFFKQIGIIKTN 263
Query: 134 KASSFKKLQKFYIDPYKLLPLQRFLPRPPGE-----KGPPRGGGRGGRGGGRGGGG---- 184
K + K + Y D + +P GE PP G+ G
Sbjct: 264 KKTG-KPMINLYTD--------KDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFHGNIIK 314
Query: 185 -----------RGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
RGGG GGG R G GG+RG GGF+GRG
Sbjct: 315 VSFATRRPEFMRGGGSGGGRR-----GRGGYRG--RGGFQGRG 350
Score = 36.6 bits (83), Expect = 0.017
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGG--GGGGNFRGGGR 46
R GG GG GGG GG +RGG RGG GG GG ++R R
Sbjct: 545 RSGGYGGDRSGGGYGG-DRGGGYGGDRGGYGGKMGGRNDYRNDQR 588
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 60.5 bits (145), Expect = 1e-09
Identities = 33/63 (52%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGR--GGFNKGQ 62
GGGRGG + GGG GG + GG S+ GGG GGG G GGG GG GGG GG+ G
Sbjct: 461 GGGRGGGSFGGGYGGGSSGGGSS---GGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGS 517
Query: 63 DQG 65
G
Sbjct: 518 SSG 520
Score = 59.3 bits (142), Expect = 2e-09
Identities = 31/62 (50%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGG-GNFRGGGRGGFGRGGGRGGFNKGQD 63
GGG GG + GG GGG + GGSS GGG GG G GG GG GGG GG+ G
Sbjct: 488 GGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSS 547
Query: 64 QG 65
G
Sbjct: 548 GG 549
Score = 58.5 bits (140), Expect = 4e-09
Identities = 30/63 (47%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 5 GGGRGGFNRGGG--GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
GGG GG + GGG GGG+ G SS G GG GG GGG GG+G G GG + G
Sbjct: 496 GGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGG 555
Query: 63 DQG 65
G
Sbjct: 556 GYG 558
Score = 57.8 bits (138), Expect = 7e-09
Identities = 32/60 (53%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 163 GEKGPPRGGGRGG--RGGGRGGGGRGGGRGGGFRGGRGGG---GGGFRGGRGGGFRGRGH 217
G G GGG GG GGG GGG GGG GG GG GGG GG GG GGG GH
Sbjct: 463 GRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGH 522
Score = 57.0 bits (136), Expect = 1e-08
Identities = 27/55 (49%), Positives = 28/55 (50%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217
G G GG GG G GGG GG GGG+ GG GGG GG GGG GH
Sbjct: 512 GYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGH 566
Score = 56.2 bits (134), Expect = 2e-08
Identities = 32/58 (55%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 163 GEKGPPRGGGRGG-RGGGRGGGGRGGG-RGGGFRGG--RGGGGGGFRGGRGGGFRGRG 216
G G GGG GG GGG GGG GGG GGG+ GG GG GG GG GGG G G
Sbjct: 481 GSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGG 538
Score = 55.1 bits (131), Expect = 5e-08
Identities = 29/57 (50%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 163 GEKGPPRGGGR--GGRGGGRGGGGRGGGRGGGFRGG-RGGGGGGFRGGRGGGFRGRG 216
G G GGG GG GGG GG GG GG+ GG GGGGGG+ GG GG G
Sbjct: 498 GYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSG 554
Score = 55.1 bits (131), Expect = 5e-08
Identities = 28/56 (50%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGR---GGFGRGGGRGG 57
GGG GG + GG GG + GG GGGGGG GG GGG GG+G G GG
Sbjct: 510 GGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGG 565
Score = 54.7 bits (130), Expect = 6e-08
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGG-GGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
SF GG GG + GG GG + GG GG GGG GG GGG GG GG GG +
Sbjct: 468 SFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSS 527
Query: 61 G 61
G
Sbjct: 528 G 528
Score = 54.3 bits (129), Expect = 8e-08
Identities = 31/63 (49%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGG-GGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
RGGG G GG GGG + GGSS GGG GG GG + GG GG GGG GG +
Sbjct: 464 RGGGSFG---GGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSG 520
Query: 63 DQG 65
G
Sbjct: 521 GHG 523
Score = 54.3 bits (129), Expect = 8e-08
Identities = 26/49 (53%), Positives = 26/49 (53%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
G GGG GG GG GGG GGG GG G G GGG GG GG G
Sbjct: 480 GGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSG 528
Score = 53.9 bits (128), Expect = 1e-07
Identities = 28/44 (63%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 174 GGRGGGRGGGGRGGGR-GGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G GG GGG GGG GGG GG G GGGGF GG GGGF G G
Sbjct: 96 GSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDG 139
Score = 53.5 bits (127), Expect = 1e-07
Identities = 31/55 (56%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 166 GPPRGGGR--GGRGGG-RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217
G RGGG GG GGG GGG GGG GGG G GGG GG G GGG G G+
Sbjct: 461 GGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGG--GSSGGGSSGGGY 513
Score = 53.5 bits (127), Expect = 1e-07
Identities = 30/68 (44%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 3 FRGGGRGGFNRGGG-GGGFNRGG----SSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGG 57
+ GG GG + GGG GGG + GG SS + GG GGGGG + GG GG G GG
Sbjct: 499 YGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSG--GG 556
Query: 58 FNKGQDQG 65
+ G G
Sbjct: 557 YGGGSSSG 564
Score = 52.0 bits (123), Expect = 4e-07
Identities = 29/63 (46%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGG--GGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
GGG G GGG GG + GG GGG GGG GG GG GG GG GG + G
Sbjct: 479 GGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGG 538
Query: 63 DQG 65
G
Sbjct: 539 GGG 541
Score = 51.6 bits (122), Expect = 5e-07
Identities = 34/67 (50%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Query: 5 GGGRGGFNR-GGGGGGFNRGG-SSNHFRG------GGGGGGGGNFRGG--GRGGFGRGGG 54
GG GG+ GG GGG RG S+ F G GGG GGG+F GG G GGFG GG
Sbjct: 68 GGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGF 127
Query: 55 RGGFNKG 61
GGF G
Sbjct: 128 GGGFGGG 134
Score = 51.2 bits (121), Expect = 7e-07
Identities = 29/48 (60%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 172 GRGGRGGGRGGGGRGGGR-GGGFRGG--RGGGGGGFRGGRGGGFRGRG 216
G GGRGGG GGG GGG GGG GG GG GG GG GGG G G
Sbjct: 460 GGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGG 507
Score = 50.4 bits (119), Expect = 1e-06
Identities = 27/45 (60%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
G G G GGGRGGG GGG GGG GG G GGG GG GG G
Sbjct: 455 GEGSSG-GGGRGGGSFGGGYGGGSSGG-GSSGGGHGGGHGGSSGG 497
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/49 (51%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
G GG GG GG GG GGG GGG GG G GGG+ GG G G
Sbjct: 476 GSSGGGSSGGGHGGGHGGSSGGGYGGGSSGG-GSSGGGYGGGSSSGGHG 523
Score = 49.3 bits (116), Expect = 3e-06
Identities = 28/55 (50%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 163 GEKGPPRGGGRGGRGGG-RGGGGRGGGRGGGFRGG--RGGGGGGFRGGRGGGFRG 214
G G GG GG GG GGG GGG G GG GG GGG GG GGG+ G
Sbjct: 490 GHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGG 544
Score = 48.5 bits (114), Expect = 4e-06
Identities = 28/53 (52%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGG 54
SF G G F G GGG GGS GGGG GGG F GG GGFG GG
Sbjct: 93 SFGGSYGGSFGGGSFGGGSFGGGSF-----GGGGFGGGGFGGGFGGGFGGDGG 140
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65
GG GG + GGGGGG+ GGSS GGG GG + GG G + G + +G
Sbjct: 528 GGYGGGSSGGGGGGYG-GGSS-----GGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKG 581
Query: 66 P 66
P
Sbjct: 582 P 582
Score = 47.8 bits (112), Expect = 7e-06
Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 17/78 (21%)
Query: 5 GGGRGGFNRGGG-------------GGGFNRGGSS--NHFRGGGGGG--GGGNFRGGGRG 47
GGG GG GGG GGGF+ GG S + RG GGG GG + GG G
Sbjct: 19 GGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLG 78
Query: 48 GFGRGGGRGGFNKGQDQG 65
GFG G RG + G
Sbjct: 79 GFGGGSFRGSYGSSSFGG 96
Score = 47.4 bits (111), Expect = 1e-05
Identities = 29/64 (45%), Positives = 30/64 (46%), Gaps = 16/64 (25%)
Query: 169 RGGGRGGRGGGRGGGG-------------RGGGRGGGFRGG---RGGGGGGFRGGRGGGF 212
R GG GG GG GGGG GG GGF GG RG GGG GG GG+
Sbjct: 15 RSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGY 74
Query: 213 RGRG 216
G G
Sbjct: 75 GGLG 78
Score = 46.6 bits (109), Expect = 2e-05
Identities = 24/52 (46%), Positives = 24/52 (46%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
G G GG GG GG GGG GG GGG G G GGG GG G
Sbjct: 521 GHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSG 572
Score = 45.8 bits (107), Expect = 3e-05
Identities = 28/64 (43%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRG-GGRGGFNK 60
SFRG G GG F G GGG GGGG GG GGFG G GG GG
Sbjct: 84 SFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLS 143
Query: 61 GQDQ 64
G ++
Sbjct: 144 GNEK 147
Score = 45.1 bits (105), Expect = 5e-05
Identities = 33/75 (44%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 2 SFRGGGRGGFNRGGGGGGFN--RGGSSNHFRGGG---GGGGGGNFRGGGRGG------FG 50
S R GG GG GGGGG + R SS GGG GG GG+F G GG G
Sbjct: 13 SSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSG 72
Query: 51 RGGGRGGFNKGQDQG 65
GG GGF G +G
Sbjct: 73 GYGGLGGFGGGSFRG 87
Score = 44.7 bits (104), Expect = 6e-05
Identities = 27/52 (51%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 15 GGGGGFNRGGSSNHFRGG-GGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65
G GG RGG S F GG GGG GG GGG GG G GG GG G G
Sbjct: 457 GSSGGGGRGGGS--FGGGYGGGSSGGGSSGGGHGG-GHGGSSGGGYGGGSSG 505
Score = 44.3 bits (103), Expect = 8e-05
Identities = 28/55 (50%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
Query: 171 GGRGGRGGGRGGGGRG-------GGRGGGFRGGRGGGGGGFRGGR--GGGFRGRG 216
GG GG GG GG RG GG GG GG GGG F GG GGGF G G
Sbjct: 72 GGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGG 126
Score = 43.9 bits (102), Expect = 1e-04
Identities = 24/44 (54%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 172 GRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGR-GGGFRG 214
G GG GG GG GGG GG GGGGF GG GGGF G
Sbjct: 90 GSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGG 133
Score = 43.9 bits (102), Expect = 1e-04
Identities = 22/37 (59%), Positives = 22/37 (59%)
Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRG 206
GGG G G GGG GGG GGGF GG GG GG G
Sbjct: 108 GGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSG 144
Score = 42.4 bits (98), Expect = 3e-04
Identities = 22/44 (50%), Positives = 22/44 (50%)
Query: 171 GGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
GG GG GG G GGG GG GG GG G GG FRG
Sbjct: 44 GGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGSFRG 87
Score = 42.4 bits (98), Expect = 3e-04
Identities = 26/46 (56%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGR--GGGFRGGRGGGGGGFRG 206
G G GGG G GG GGG GGG GGGF GG GGG GG G
Sbjct: 96 GSYGGSFGGGSFG-GGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGG 140
Score = 38.9 bits (89), Expect = 0.003
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 170 GGGRGGR-GGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
GG GG G GGG GG GG+ G G GGG FRG G G
Sbjct: 50 GGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFG 95
Score = 38.5 bits (88), Expect = 0.004
Identities = 31/64 (48%), Positives = 31/64 (48%), Gaps = 19/64 (29%)
Query: 170 GGGRGGRGGGRG-------------GGG--RGGGRGGGF-RGGRGGG-GGGFRGGRG--G 210
GGG GG GGG G GGG GG GG F RG GGG GG GG G G
Sbjct: 19 GGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLG 78
Query: 211 GFRG 214
GF G
Sbjct: 79 GFGG 82
Score = 37.0 bits (84), Expect = 0.013
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56
+ GG GG G GGG + GG S+ G GGG G + G G +G
Sbjct: 530 YGGGSSGGGGGGYGGG--SSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKG 581
Score = 35.0 bits (79), Expect = 0.049
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGR 55
GGG GG+ G GGG + GG + GG GG + G G G R
Sbjct: 536 GGGGGGYGGGSSGGGSSSGGG---YGGGSSSGGHKSSSSGSVGESSSKGPR 583
Score = 34.7 bits (78), Expect = 0.064
Identities = 16/27 (59%), Positives = 16/27 (59%)
Query: 190 GGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G G GG G GGG F GG GGG G G
Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGG 481
Score = 32.0 bits (71), Expect = 0.41
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 7/51 (13%)
Query: 22 RGGSSNHFRGGGGGGGGGNFRGGGRGGF-------GRGGGRGGFNKGQDQG 65
R SS H+ GGGGG GG GG +G GGF+ G G
Sbjct: 4 RYSSSKHYSSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSG 54
Score = 31.2 bits (69), Expect = 0.71
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 33 GGGGGGGNFRGGGRGGFGRGGG-RGGFNKGQDQG 65
G G GG RGGG G G GGG GG + G G
Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHG 488
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 60.1 bits (144), Expect = 1e-09
Identities = 34/54 (62%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G G GG GGRGGG GGG GG G GF GG G GGGGF GGR GGF G G
Sbjct: 79 GGGGFGAAGGFGGRGGGFGGGSSFGG-GSGFSGG-GFGGGGFGGGRFGGFGGPG 130
Score = 59.7 bits (143), Expect = 2e-09
Identities = 37/77 (48%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-GGRGGFGRGGGRGGFNKGQ 62
RGGG GG + GGG GF+ GG GGGG GGG F G GG GG G GG GGF G
Sbjct: 92 RGGGFGGGSSFGGGSGFSGGGF------GGGGFGGGRFGGFGGPGGVGGLGGPGGFGPGG 145
Query: 63 DQGPPERVVLLGEFLHP 79
G V + L P
Sbjct: 146 YPGGIHEVSVNQSLLQP 162
Score = 54.7 bits (130), Expect = 6e-08
Identities = 36/84 (42%), Positives = 37/84 (44%), Gaps = 26/84 (30%)
Query: 1 MSFRGGGRGGFNRGG---------------------GGGGFNR----GGSSNHFRGGGGG 35
+S GGG GGF GG GGGGF GG F GG
Sbjct: 43 LSRHGGGGGGFGGGGFGSRSLVGLGGTKSISISVAGGGGGFGAAGGFGGRGGGFGGGSSF 102
Query: 36 GGGGNFRGGGRGGFGRGGGR-GGF 58
GGG F GGG GG G GGGR GGF
Sbjct: 103 GGGSGFSGGGFGGGGFGGGRFGGF 126
Score = 54.7 bits (130), Expect = 6e-08
Identities = 31/53 (58%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG-GGFRGRGH 217
G GGG G GGG GGGG GGGR GGF G G GG G GG G GG+ G H
Sbjct: 99 GSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGGPGGFGPGGYPGGIH 151
Score = 52.8 bits (125), Expect = 2e-07
Identities = 30/69 (43%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 4 RGGGRGGFNRGGG--GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG-----RGGGRG 56
+ G RGG GG GGG+ GG S G GGG GG+ GGG G G GG RG
Sbjct: 545 QSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRG 604
Query: 57 GFNKGQDQG 65
G + G G
Sbjct: 605 GSSSGGGYG 613
Score = 52.4 bits (124), Expect = 3e-07
Identities = 34/66 (51%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
GGG G GG GG GGSS F GG GGG GGG F GG GGFG GG GG
Sbjct: 80 GGGFGAAGGFGGRGGGFGGGSS--FGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGG 137
Query: 61 GQDQGP 66
GP
Sbjct: 138 PGGFGP 143
Score = 50.4 bits (119), Expect = 1e-06
Identities = 30/66 (45%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG------GGGGGGGNFRGGGRGGFGRGGGRGGFN 59
GG GG RG GG GSS++ GG GG GGGG+ GGG G G GGR G
Sbjct: 519 GGSGG--RGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSG 576
Query: 60 KGQDQG 65
G G
Sbjct: 577 GGSKGG 582
Score = 48.5 bits (114), Expect = 4e-06
Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 6 GGRGGFNRGG---GGGGFNRGGSSNHFRGGGGGGG----GGNFRGGGRGG-FGRGGG-RG 56
GGRG + GG G + GG + RGG GGGG GG GGG GG +G GGG +G
Sbjct: 522 GGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKG 581
Query: 57 GFNKGQDQG 65
G G G
Sbjct: 582 GSISGGGYG 590
Score = 48.1 bits (113), Expect = 6e-06
Identities = 27/53 (50%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGG--RGGGFRGRG 216
G + G RGG GGG G G G GGG GGR G GGG +GG GGG+ G
Sbjct: 542 GGRQSGSRGGSGGGGSISGGGYGSGGG-SGGRYGSGGGSKGGSISGGGYGSGG 593
Score = 48.1 bits (113), Expect = 6e-06
Identities = 29/62 (46%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 160 RPPGEKGPPRGGGR---GGRGGGRGGGGR----GGGRGGGFRGGRGGGGGGFRGGRGGGF 212
R G +G GGG GG G G G GGR GG +GG GG G GGG + GGG
Sbjct: 544 RQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGG-KHSSGGGS 602
Query: 213 RG 214
RG
Sbjct: 603 RG 604
Score = 47.4 bits (111), Expect = 1e-05
Identities = 30/65 (46%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 5 GGGR---GGFNRGGGGGG-FNRGGSS--NHFRGGGGGGGGGNFR--GGGRGGFGRGGGRG 56
GGG GG+ GGG GG + GG S GGG G GGG GG RGG GGG G
Sbjct: 554 GGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYG 613
Query: 57 GFNKG 61
G
Sbjct: 614 SGGGG 618
Score = 46.6 bits (109), Expect = 2e-05
Identities = 27/53 (50%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 170 GGGRGGR----GGGRGGGGRGGGRGGGFRGGRGGGGGGFRGG--RGGGFRGRG 216
GGG GGR GG +GG GGG G G GG+ GGG RGG GGG+ G
Sbjct: 566 GGGSGGRYGSGGGSKGGSISGGGYGSG--GGKHSSGGGSRGGSSSGGGYGSGG 616
Score = 46.2 bits (108), Expect = 2e-05
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 163 GEKGPPRGGGRGGRGGGR---GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF 212
G KG GG G GGG+ GGG RGG GG G GGG +G G F
Sbjct: 578 GSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGSSSVKGSSGEAF 630
Score = 45.1 bits (105), Expect = 5e-05
Identities = 28/56 (50%), Positives = 29/56 (51%), Gaps = 13/56 (23%)
Query: 171 GGRGGRGGGRGGGGRGG-------GRGGGFRGGRGGGG----GGFRGGRGGGFRGR 215
GG GGRG GGG G GR G RGG GGGG GG+ G GGG GR
Sbjct: 519 GGSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGY--GSGGGSGGR 572
Score = 43.9 bits (102), Expect = 1e-04
Identities = 34/86 (39%), Positives = 34/86 (39%), Gaps = 30/86 (34%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGS----------SNHFRGGGGGG-GGGNFR---------- 42
RGGG GGF G GGS S H GGGGGG GGG F
Sbjct: 12 RGGGGGGFRGFSSGSAVVSGGSRRSTSSFSCLSRH--GGGGGGFGGGGFGSRSLVGLGGT 69
Query: 43 -------GGGRGGFGRGGGRGGFNKG 61
GG GGFG GG GG G
Sbjct: 70 KSISISVAGGGGGFGAAGGFGGRGGG 95
Score = 43.5 bits (101), Expect = 1e-04
Identities = 30/55 (54%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 169 RGGGRGGR---GGGRG--GGGRGGGRGGGFRGGRGGGGGGFRG-GRGGGFRGRGH 217
RGGG GG GGG G GGG GGG GG R G GG GG G G GGF G+
Sbjct: 92 RGGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGGPGGFGPGGY 146
Score = 43.5 bits (101), Expect = 1e-04
Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGG-----RGGGFRGGRGGGGGGFRGGRG 209
G G G G G +GG GGG G G GGG RGG GGG GG G
Sbjct: 567 GGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGG 618
Score = 43.1 bits (100), Expect = 2e-04
Identities = 29/63 (46%), Positives = 32/63 (50%), Gaps = 14/63 (22%)
Query: 163 GEKGPPRGGG---------RGGRGGGRGGGGRGGGR--GGGFRGGRGGGGGGFRGGRGGG 211
G +G GGG GGR G GG GGG GGG+ G GGG GG R G GGG
Sbjct: 522 GGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGY--GSGGGSGG-RYGSGGG 578
Query: 212 FRG 214
+G
Sbjct: 579 SKG 581
Score = 42.4 bits (98), Expect = 3e-04
Identities = 28/58 (48%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
F GGG GG GG GGG R GG GG GG GG GGFG GG GG ++
Sbjct: 108 FSGGGFGG---GGFGGG----------RFGGFGGPGGVGGLGGPGGFGPGGYPGGIHE 152
Score = 39.3 bits (90), Expect = 0.003
Identities = 26/54 (48%), Positives = 26/54 (48%), Gaps = 15/54 (27%)
Query: 176 RGGGRGGGGRGGGRGGGFRGGRG----------GGGGGFR-----GGRGGGFRG 214
R GG GGG GGG G G G GGGGGF GGRGGGF G
Sbjct: 45 RHGGGGGGFGGGGFGSRSLVGLGGTKSISISVAGGGGGFGAAGGFGGRGGGFGG 98
Score = 39.3 bits (90), Expect = 0.003
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 5 GGGRGGFNRGGG---------GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG 50
GG +GG GGG GG +RGGSS+ G GGGG + +G FG
Sbjct: 577 GGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGSSSVKGSSGEAFG 631
Score = 33.5 bits (75), Expect = 0.14
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 15/50 (30%)
Query: 175 GRGGGRGGGGRGGGRGGGFRGG--------------RGGGGGGFRGGRGG 210
GRGGG GGG RG G G GGGGGGF GG G
Sbjct: 11 GRGGG-GGGFRGFSSGSAVVSGGSRRSTSSFSCLSRHGGGGGGFGGGGFG 59
Score = 30.4 bits (67), Expect = 1.2
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 170 GGGR----GGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFR 213
GGG+ GG GG GG G GGG +G G F FR
Sbjct: 592 GGGKHSSGGGSRGGSSSGGGYGSGGGGSSSVKGSSGEAFGSSVTFSFR 639
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGN 40
GG RGG + GGG G + GG S+ +G G G +
Sbjct: 600 GGSRGGSSSGGGYG--SGGGGSSSVKGSSGEAFGSS 633
Score = 27.7 bits (60), Expect = 7.8
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 17/46 (36%)
Query: 33 GGGGGGGNFRGGGRG-----GFGR------------GGGRGGFNKG 61
G GGGGG FRG G G R GGG GGF G
Sbjct: 11 GRGGGGGGFRGFSSGSAVVSGGSRRSTSSFSCLSRHGGGGGGFGGG 56
>gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapiens]
Length = 1270
Score = 59.3 bits (142), Expect = 2e-09
Identities = 34/76 (44%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-GRGG------- 53
S+ GGG GG GG G GGS+N FR G G G GG +RG RGGF G G
Sbjct: 1179 SYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSGGDYRGPS 1238
Query: 54 ----GRGGFNKGQDQG 65
G GGF +G +G
Sbjct: 1239 GGYRGSGGFQRGGGRG 1254
Score = 51.2 bits (121), Expect = 7e-07
Identities = 34/64 (53%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 2 SFRGG---GRGGFNRGGGGGGFNRGGSSNHFRGGGGG--GGGGNFRGGGRGGFGR---GG 53
SFR G G GG RG GGF RG S +RG GG G GG RGGGRG +G G
Sbjct: 1205 SFRAGYGAGVGGGYRGVSRGGF-RGNSGGDYRGPSGGYRGSGGFQRGGGRGAYGTGYFGQ 1263
Query: 54 GRGG 57
GRGG
Sbjct: 1264 GRGG 1267
Score = 48.1 bits (113), Expect = 6e-06
Identities = 29/59 (49%), Positives = 33/59 (55%), Gaps = 11/59 (18%)
Query: 8 RGGFNRGGGGG--GFNRGGSSNHFRGGGGG---GGGGNFRGGGRGGFGRGGGRGGFNKG 61
R G+ G GGG G +RGG FRG GG G G +RG GGF RGGGRG + G
Sbjct: 1207 RAGYGAGVGGGYRGVSRGG----FRGNSGGDYRGPSGGYRGS--GGFQRGGGRGAYGTG 1259
Score = 47.4 bits (111), Expect = 1e-05
Identities = 35/78 (44%), Positives = 36/78 (46%), Gaps = 22/78 (28%)
Query: 159 PRPP------GEKGPPRGGGR---GGRGGGRGGGGRGGGRGGG----FRGGRG---GGG- 201
PRPP G RGG GG GGG GG G G GG FR G G GGG
Sbjct: 1159 PRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGY 1218
Query: 202 -----GGFRGGRGGGFRG 214
GGFRG GG +RG
Sbjct: 1219 RGVSRGGFRGNSGGDYRG 1236
Score = 42.7 bits (99), Expect = 2e-04
Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRG-------GGRGGGFRGGRGG--GGGGFRGGRGGGFR 213
G G R G G G GGG RG G GG +RG GG G GGF+ G G G
Sbjct: 1197 GGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSGGDYRGPSGGYRGSGGFQRGGGRGAY 1256
Query: 214 GRGH 217
G G+
Sbjct: 1257 GTGY 1260
Score = 42.7 bits (99), Expect = 2e-04
Identities = 29/53 (54%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRG-GGFR--GGRGGGGGGFRG-GRGGG 211
G +G RGG RG GG G GG RG GGF+ GGRG G G+ G GRGGG
Sbjct: 1217 GYRGVSRGGFRGNSGGDYRGPS-GGYRGSGGFQRGGGRGAYGTGYFGQGRGGG 1268
Score = 41.6 bits (96), Expect = 5e-04
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G G RG RGG G GG RG GG+RG G GG RG G G+ G+G
Sbjct: 1213 GVGGGYRGVSRGGFRGNSGGDYRGPS--GGYRGSGGFQRGGGRGAYGTGYFGQG 1264
Score = 40.8 bits (94), Expect = 9e-04
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 13 RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65
R G G+ RGGSS GGG GG + GG G G GG F G G
Sbjct: 1166 RYDNGSGYRRGGSSY-----SGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAG 1213
Score = 40.8 bits (94), Expect = 9e-04
Identities = 25/45 (55%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGG--RGGGRG----GGFRGGRGGGG 201
G +G G RG GG RG GG RGGGRG G F GRGGGG
Sbjct: 1225 GFRGNSGGDYRGPSGGYRGSGGFQRGGGRGAYGTGYFGQGRGGGG 1269
Score = 40.0 bits (92), Expect = 0.002
Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 17/70 (24%)
Query: 10 GFNRGGG---GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGG-------RGGF- 58
G+ RGG GGG+ G SS + GG GG +FR G +G G G RGGF
Sbjct: 1172 GYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAG----YGAGVGGGYRGVSRGGFR 1227
Query: 59 -NKGQD-QGP 66
N G D +GP
Sbjct: 1228 GNSGGDYRGP 1237
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 58.5 bits (140), Expect = 4e-09
Identities = 32/57 (56%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGG--GFRGGRG---GGGGGFRGGRGGGFRG 214
G G G RGG GG GGGG GGG GG G RGG G GGG G GG GGG+ G
Sbjct: 480 GSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGG 536
Score = 58.5 bits (140), Expect = 4e-09
Identities = 33/61 (54%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 163 GEKGPPRGGG---RGGRGGGRGGG-GRGGGRGGGFRGGRGGG-----GGGFRGGRGGGFR 213
G G GGG RGG GG GGG G GGG GGG+ GG GGG GGG GG GG +
Sbjct: 500 GGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYG 559
Query: 214 G 214
G
Sbjct: 560 G 560
Score = 58.5 bits (140), Expect = 4e-09
Identities = 29/52 (55%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRG---GGGGGFRGGRGGGFRG 214
G GGG GG GG GGG GG GGG GG G GGG G GG GGG+ G
Sbjct: 523 GSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGG 574
Score = 58.2 bits (139), Expect = 5e-09
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGG--GGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
GG G +RGG GG + GGS + GG G GG GG++ GG G G GGG GG + G
Sbjct: 482 GGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGG 541
Query: 63 DQG 65
G
Sbjct: 542 HSG 544
Score = 57.8 bits (138), Expect = 7e-09
Identities = 32/61 (52%), Positives = 33/61 (54%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64
GGG GG +RG GG SS F GG GGG GG F GG GFG GG GG G D
Sbjct: 87 GGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDG 146
Query: 65 G 65
G
Sbjct: 147 G 147
Score = 57.8 bits (138), Expect = 7e-09
Identities = 32/68 (47%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 4 RGGGRGGFNRGGGGGGF-----NRGGSSNHFRGG-GGGGGGGNFRGGGRGGFGRGGGRGG 57
RGG G + GG GGG+ +RGGS + GG G GGG G GGG GG G GG GG
Sbjct: 490 RGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGG-GHSGGSGG 548
Query: 58 FNKGQDQG 65
+ G G
Sbjct: 549 GHSGGSGG 556
Score = 57.0 bits (136), Expect = 1e-08
Identities = 28/56 (50%), Positives = 31/56 (55%)
Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGG 57
S+ GG G GGG GG + GG S GG GG GGN+ GG G G GGG GG
Sbjct: 519 SYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGG 574
Score = 57.0 bits (136), Expect = 1e-08
Identities = 27/57 (47%), Positives = 30/57 (52%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
GGG GG + GG GGG + G N+ G G GGG G GGG G G GG G G
Sbjct: 535 GGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSG 591
Score = 56.2 bits (134), Expect = 2e-08
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56
GGG GG GG GGG + G H G GG GGG+ GGG GG G GGG G
Sbjct: 527 GGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGG-GYGGGSG 577
Score = 55.5 bits (132), Expect = 4e-08
Identities = 32/59 (54%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 163 GEKGPPRGGGRGGR------GGGRGGGGRG-GGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
G G GGG GG GGG GGG RG GG GG GG GGGF GG GGGF G
Sbjct: 67 GSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGG 125
Score = 55.5 bits (132), Expect = 4e-08
Identities = 31/55 (56%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 163 GEKGPPRGGGRGGRGGGRGGG-GRGGGRGGGFRGGRG--GGGGGFRGGRGGGFRG 214
G G GG GG GG GGG G GGG GGG+ GG G GG GG GG G GF G
Sbjct: 541 GHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGG-GSGFGG 594
Score = 55.1 bits (131), Expect = 5e-08
Identities = 29/47 (61%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 171 GGRGGRGG--GRGG-GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
GGRGG GG GRG GG GG GGG GG GGG G RGG GG + G
Sbjct: 476 GGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGG 522
Score = 54.7 bits (130), Expect = 6e-08
Identities = 28/55 (50%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Query: 169 RGGGRGGRGGGRGGGGRGGGRG---------GGFRGGRGGGGGGFRGGRGGGFRG 214
RGG G GGG GGG GGG G GG G GG GGG+ GG GGG G
Sbjct: 490 RGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSG 544
Score = 54.7 bits (130), Expect = 6e-08
Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 2 SFRGGGRGGF------NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGR 55
S+ GGG GG +RGG GG + G S GGG GGG G GG GG GG
Sbjct: 496 SYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSG 555
Query: 56 GGFNKGQDQG 65
G + G G
Sbjct: 556 GNYGGGSGSG 565
Score = 54.3 bits (129), Expect = 8e-08
Identities = 30/53 (56%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 170 GGGRGGRGGGRGGG---GRGGGRGGGFRGGRGGG---GGGFRGGRGGGFRGRG 216
GG GG GGG GGG G GGG GG G GGG GGG GG GGG RG
Sbjct: 528 GGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRG 580
Score = 53.9 bits (128), Expect = 1e-07
Identities = 38/80 (47%), Positives = 41/80 (51%), Gaps = 19/80 (23%)
Query: 5 GGGRGGFNRGGG-GGGFNR-------GGSSNHFRG--GGG----GGGGGNFRGGGRGGFG 50
GGG G++ GGG GGGF+ GG S F G GGG GG GG F GG GGFG
Sbjct: 65 GGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFG 124
Query: 51 RG-----GGRGGFNKGQDQG 65
G GG GGF G G
Sbjct: 125 GGYGSGFGGFGGFGGGAGGG 144
Score = 53.1 bits (126), Expect = 2e-07
Identities = 31/57 (54%), Positives = 31/57 (54%), Gaps = 12/57 (21%)
Query: 170 GGGRGGRGGGRGGG---------GRGGGRGGGFRGGRG---GGGGGFRGGRGGGFRG 214
GGG G GG GGG G GGG GGGF GG G GG GGF GG GGG G
Sbjct: 91 GGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDGG 147
Score = 53.1 bits (126), Expect = 2e-07
Identities = 29/59 (49%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGG---GGNFRGGGRGGFGRGGGRGGFNKG 61
GGRGG GG G +RGGS + GGG GGG G RGG G +G G G GG + G
Sbjct: 476 GGRGG--SGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGG 532
Score = 53.1 bits (126), Expect = 2e-07
Identities = 25/58 (43%), Positives = 29/58 (50%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
RGG G + G G GG + GG GG GG GG GG G +G G G GG + G
Sbjct: 513 RGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGG 570
Score = 52.8 bits (125), Expect = 2e-07
Identities = 28/56 (50%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 163 GEKGPPRGGGRGGRGGGRGG--GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G G GGG G GG GG GG GGG GG GG GG GG GG G G G
Sbjct: 514 GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSG 569
Score = 52.8 bits (125), Expect = 2e-07
Identities = 28/61 (45%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGG---------GFRGGRGGGFR 213
G G GGG GG G GGG GG GG + GG G GGG G RGG GG
Sbjct: 528 GGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHG 587
Query: 214 G 214
G
Sbjct: 588 G 588
Score = 52.4 bits (124), Expect = 3e-07
Identities = 31/66 (46%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 2 SFRGGGRGGFNRG--GGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFN 59
S+ G RGG GGG G GG S G GG GGG+ GGG GG G GGG GG +
Sbjct: 484 SYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGG-GYGGGSGGGH 542
Query: 60 KGQDQG 65
G G
Sbjct: 543 SGGSGG 548
Score = 52.4 bits (124), Expect = 3e-07
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 5 GGGRGGFNRG---GGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
GGG GG + G GG GG + GGS ++ GG G GGG GG GG G GG GG + G
Sbjct: 531 GGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSG--GGYGGGSGSRGGSGGSHGG 588
Score = 52.4 bits (124), Expect = 3e-07
Identities = 31/58 (53%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 163 GEKGPPRGGGRGGRGGGRG-GGGRGGGRGG--GFRGGRG---GGGGGFRGGRGGGFRG 214
G G GG G GGG G GGG GGG GG G RGG G GGG GF G GG + G
Sbjct: 545 GSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGG 602
Score = 50.1 bits (118), Expect = 1e-06
Identities = 27/45 (60%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGG 210
G GG GG GG GGG GGG G GF GG GG GGG GG GG
Sbjct: 104 GYSSSGGFGGGFGGGSGGGFGGGYGSGF-GGFGGFGGGAGGGDGG 147
Score = 49.7 bits (117), Expect = 2e-06
Identities = 33/70 (47%), Positives = 34/70 (48%), Gaps = 23/70 (32%)
Query: 170 GGGRGGR--------GG-----GRGGGGR-----GGGRGGGFR-----GGRGGGGGGFRG 206
GGG GGR GG GRGGGG GGG GGGF GG GGG GF G
Sbjct: 40 GGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGG 99
Query: 207 GRGGGFRGRG 216
GGG+ G
Sbjct: 100 ASGGGYSSSG 109
Score = 49.7 bits (117), Expect = 2e-06
Identities = 28/59 (47%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGG-----GRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G G GG GG GG GGG GG G G G GG GGG GG G RGG G
Sbjct: 529 GSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHG 587
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 GGGRGGFNRGG-GGGGFNRGGSSNHFRGGGGGGG--GGNFRGGGRGGFGRGGGRGG 57
G G GG + GG GGG +RGGS GG G GG GG++ GGG G GGG GG
Sbjct: 561 GSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSY-GGGEEASGSGGGYGG 615
Score = 49.3 bits (116), Expect = 3e-06
Identities = 26/51 (50%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG--GGGGFRGGRGGGFRG 214
G GGG GG G RGG G G G GF G GG GGG G GGG+ G
Sbjct: 565 GGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGG 615
Score = 47.8 bits (112), Expect = 7e-06
Identities = 33/74 (44%), Positives = 36/74 (48%), Gaps = 17/74 (22%)
Query: 5 GGGRGGFNRGGG-GGGFNR------GGSSNHFRGGGGGGG------GGNFRGGGRGGFGR 51
GGG G F+ G GGG +R GGS + GGG GGG GG F GG RG G
Sbjct: 41 GGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGA 100
Query: 52 GGG----RGGFNKG 61
GG GGF G
Sbjct: 101 SGGGYSSSGGFGGG 114
Score = 46.6 bits (109), Expect = 2e-05
Identities = 34/86 (39%), Positives = 41/86 (47%), Gaps = 25/86 (29%)
Query: 1 MSFRGGGRGG--------------FNRGGGGGGFNRGGSSNHFRGGG----GGGGGGNFR 42
+S GGG GG F+ GGGGG R SS+ + GG G GGGG+F
Sbjct: 11 LSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFG 70
Query: 43 ----GGGRGGFGR---GGGRGGFNKG 61
GG GGF GGG GG ++G
Sbjct: 71 YSYGGGSGGGFSASSLGGGFGGGSRG 96
Score = 46.6 bits (109), Expect = 2e-05
Identities = 27/49 (55%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGG--GGGGFRGGRGGGFRGRG 216
G G+ G GG GG GG G G RGG GG GGGG GG GGG RG
Sbjct: 469 GAGKIGLGGR---GGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRG 514
Score = 42.4 bits (98), Expect = 3e-04
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 6 GGRGGFNRGGGG--GGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56
GG+ F G G G RGGS + G GG GG++ GGG G G GGG G
Sbjct: 460 GGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGG-SGGGYGGGSG 511
Score = 41.2 bits (95), Expect = 7e-04
Identities = 22/42 (52%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 169 RGGGRGGRGGGRGGGGR-GGGRGGGFRGGRGGGGGGFRGGRG 209
RGG G GGG G GG GG GGG G GGG+ GG G
Sbjct: 579 RGGSGGSHGGGSGFGGESGGSYGGGEEA--SGSGGGYGGGSG 618
Score = 40.4 bits (93), Expect = 0.001
Identities = 29/66 (43%), Positives = 30/66 (45%), Gaps = 23/66 (34%)
Query: 170 GGGRGGRGGG-----------RGGGGRGGGR-------GGGFRG--GRGGGGG---GFRG 206
GGG GG G G GGG GGGR GGG GRGGGG + G
Sbjct: 16 GGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGG 75
Query: 207 GRGGGF 212
G GGGF
Sbjct: 76 GSGGGF 81
Score = 40.0 bits (92), Expect = 0.002
Identities = 26/54 (48%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 169 RGGGRGGRGGGRGGGGR----------GGGRGGGFRGGRGGGGGGFR-GGRGGG 211
R GG GG G G GG R GGG GG F G GGG R GRGGG
Sbjct: 13 RSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGG 66
Score = 35.8 bits (81), Expect = 0.029
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 15 GGGGGFNRGGSSNHFRGGGGGGGGGNF----RGGGRGGFGRGGGRGGFNKG 61
GG F G+ GG GG GG++ RGG G +G GG GG+ G
Sbjct: 460 GGQEDFESSGAGK-IGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGG 509
Score = 35.4 bits (80), Expect = 0.038
Identities = 21/41 (51%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGG 203
G G GGG G GG G G G GGF GG GGG GG
Sbjct: 113 GGFGGGSGGGFG------GGYGSGFGGFGGFGGGAGGGDGG 147
Score = 31.2 bits (69), Expect = 0.71
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 25 SSNHFRGGGGGGGGGNFRGGGRGGFGR------GGGRGGFNKGQDQG 65
SS R GGGGGGG G R + R GGG G F+ G
Sbjct: 8 SSYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYG 54
Score = 30.0 bits (66), Expect = 1.6
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRG 43
GG GG + GG G G GGS + GG G GGG G G
Sbjct: 580 GGSGGSHGGGSGFGGESGGS---YGGGEEASGSGGGYGGGSG 618
Score = 28.1 bits (61), Expect = 6.0
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 12/41 (29%)
Query: 186 GGGRGGGFRGG------------RGGGGGGFRGGRGGGFRG 214
GGG GGG G GGGGGG R G+ G
Sbjct: 15 GGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGG 55
Score = 27.7 bits (60), Expect = 7.8
Identities = 19/37 (51%), Positives = 19/37 (51%), Gaps = 7/37 (18%)
Query: 5 GGGRG-GFNRGGG-GGGFNRGGSSNHFRGGGGGGGGG 39
GGG G G GG GGG GS GGG GGG G
Sbjct: 587 GGGSGFGGESGGSYGGGEEASGS-----GGGYGGGSG 618
>gi|131412228 keratin 13 isoform b [Homo sapiens]
Length = 420
Score = 57.4 bits (137), Expect = 9e-09
Identities = 30/49 (61%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 170 GGGRGGRGGGRG---GGGRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214
GG GG GGG GGG G G GGG+ GG GGG GGG GG GGGF G
Sbjct: 39 GGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAG 87
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/60 (55%), Positives = 34/60 (56%), Gaps = 15/60 (25%)
Query: 170 GGGRG-----------GRGGGRGGG---GRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214
GGGRG G GG GGG G GGG G GF GG GGG GGG+ GG GGGF G
Sbjct: 24 GGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGG 83
Score = 50.1 bits (118), Expect = 1e-06
Identities = 32/67 (47%), Positives = 37/67 (55%), Gaps = 14/67 (20%)
Query: 5 GGGRG----------GFNRGGGGGGFN---RGGSSNHFRGGGGGGGGGNFRGGGRGGFGR 51
GGGRG G + GG GGG + GG+ + F GG GGG GG + GG GGFG
Sbjct: 24 GGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFG- 82
Query: 52 GGGRGGF 58
GG GGF
Sbjct: 83 GGFAGGF 89
Score = 47.8 bits (112), Expect = 7e-06
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 14/59 (23%)
Query: 170 GGGRGGRGGGRG-------------GGGRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214
GGG GGGRG GG GGG GF GG G G GGG+ GG GGG+ G
Sbjct: 17 GGGSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGG 75
Score = 44.3 bits (103), Expect = 8e-05
Identities = 25/49 (51%), Positives = 25/49 (51%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
G G G GG GG GGG GGG GGGF GG GG F GG G
Sbjct: 54 GGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDGGLLTG 102
Score = 43.5 bits (101), Expect = 1e-04
Identities = 28/60 (46%), Positives = 30/60 (50%), Gaps = 16/60 (26%)
Query: 170 GGGRGGRGGGRGGGGRG----------GGRGGGFRGG-----RGGGGGGFRGGRGGGFRG 214
GGG GG G + GGGRG GG GG+ GG GG G GF GG GGG G
Sbjct: 13 GGGFGG-GSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGG 71
Score = 42.4 bits (98), Expect = 3e-04
Identities = 21/34 (61%), Positives = 21/34 (61%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGG 196
G G GGG GG GG GGG GGG GGGF GG
Sbjct: 55 GGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
Score = 42.0 bits (97), Expect = 4e-04
Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 5 GGGRGGFNRG-------GGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-GRGGGRG 56
GG GG+ G G G GF GG GG GGG GG F GG GGF G G
Sbjct: 39 GGSAGGYGGGVSCGFGGGAGSGFG-GGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDG 97
Query: 57 GFNKGQDQ 64
G G ++
Sbjct: 98 GLLTGNEK 105
Score = 38.5 bits (88), Expect = 0.004
Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-GGRGGFGRGGGRGG 57
S+ GG GG + GGG G + + G GG GGG G GG G G GGG GG
Sbjct: 11 SYGGGFGGGSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGG 67
Score = 29.3 bits (64), Expect = 2.7
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
Query: 25 SSNHFRGGGGGGGGGNFRGGGRG------GFGRGGGRGGFNKGQDQG 65
SS+ GGG GGG GGGRG F GG GG+ G G
Sbjct: 7 SSSASYGGGFGGGSCQL-GGGRGVSTCSTRFVSGGSAGGYGGGVSCG 52
>gi|131412225 keratin 13 isoform a [Homo sapiens]
Length = 458
Score = 57.4 bits (137), Expect = 9e-09
Identities = 30/49 (61%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 170 GGGRGGRGGGRG---GGGRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214
GG GG GGG GGG G G GGG+ GG GGG GGG GG GGGF G
Sbjct: 39 GGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAG 87
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/60 (55%), Positives = 34/60 (56%), Gaps = 15/60 (25%)
Query: 170 GGGRG-----------GRGGGRGGG---GRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214
GGGRG G GG GGG G GGG G GF GG GGG GGG+ GG GGGF G
Sbjct: 24 GGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGG 83
Score = 50.1 bits (118), Expect = 1e-06
Identities = 32/67 (47%), Positives = 37/67 (55%), Gaps = 14/67 (20%)
Query: 5 GGGRG----------GFNRGGGGGGFN---RGGSSNHFRGGGGGGGGGNFRGGGRGGFGR 51
GGGRG G + GG GGG + GG+ + F GG GGG GG + GG GGFG
Sbjct: 24 GGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFG- 82
Query: 52 GGGRGGF 58
GG GGF
Sbjct: 83 GGFAGGF 89
Score = 47.8 bits (112), Expect = 7e-06
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 14/59 (23%)
Query: 170 GGGRGGRGGGRG-------------GGGRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214
GGG GGGRG GG GGG GF GG G G GGG+ GG GGG+ G
Sbjct: 17 GGGSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGG 75
Score = 44.3 bits (103), Expect = 8e-05
Identities = 25/49 (51%), Positives = 25/49 (51%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
G G G GG GG GGG GGG GGGF GG GG F GG G
Sbjct: 54 GGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDGGLLTG 102
Score = 43.5 bits (101), Expect = 1e-04
Identities = 28/60 (46%), Positives = 30/60 (50%), Gaps = 16/60 (26%)
Query: 170 GGGRGGRGGGRGGGGRG----------GGRGGGFRGG-----RGGGGGGFRGGRGGGFRG 214
GGG GG G + GGGRG GG GG+ GG GG G GF GG GGG G
Sbjct: 13 GGGFGG-GSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGG 71
Score = 42.4 bits (98), Expect = 3e-04
Identities = 21/34 (61%), Positives = 21/34 (61%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGG 196
G G GGG GG GG GGG GGG GGGF GG
Sbjct: 55 GGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
Score = 42.0 bits (97), Expect = 4e-04
Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 5 GGGRGGFNRG-------GGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-GRGGGRG 56
GG GG+ G G G GF GG GG GGG GG F GG GGF G G
Sbjct: 39 GGSAGGYGGGVSCGFGGGAGSGFG-GGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDG 97
Query: 57 GFNKGQDQ 64
G G ++
Sbjct: 98 GLLTGNEK 105
Score = 38.5 bits (88), Expect = 0.004
Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-GGRGGFGRGGGRGG 57
S+ GG GG + GGG G + + G GG GGG G GG G G GGG GG
Sbjct: 11 SYGGGFGGGSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGG 67
Score = 29.3 bits (64), Expect = 2.7
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
Query: 25 SSNHFRGGGGGGGGGNFRGGGRG------GFGRGGGRGGFNKGQDQG 65
SS+ GGG GGG GGGRG F GG GG+ G G
Sbjct: 7 SSSASYGGGFGGGSCQL-GGGRGVSTCSTRFVSGGSAGGYGGGVSCG 52
>gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo
sapiens]
Length = 305
Score = 57.4 bits (137), Expect = 9e-09
Identities = 36/80 (45%), Positives = 42/80 (52%), Gaps = 25/80 (31%)
Query: 3 FRGGGRGGFNR-GGGGGGFNRGGS------------SNH------FRGGGGGGGGGNFRG 43
+ GGG GG+N GGGGGG + GGS S H + GGGGGGGG+ G
Sbjct: 223 YGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSSWG 282
Query: 44 GG------RGGFGRGGGRGG 57
G RGG+G GGG GG
Sbjct: 283 GRSNSGPYRGGYGGGGGYGG 302
Score = 54.3 bits (129), Expect = 8e-08
Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 104 LENKEQIGKV-------DEIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQR 156
+E+ Q G V D+ G+ R F F +N A+ + KF+ + +++
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVY--FQNHDAADKAAVVKFHPIQGHRVEVKK 172
Query: 157 FLPRPPGEKGPPRGGGRGGRGGGRGGGGRGGGR---------GGGFR--GGRGGGGGGFR 205
+P+ G GG R RGG RGG GRGGGR GGG+ GG GGGGGG
Sbjct: 173 AVPKEDIYSGGGGGGSRSSRGG-RGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGY 231
Query: 206 GGRGGGFRGRGH 217
GGG G +
Sbjct: 232 NAYGGGGGGSSY 243
Score = 52.0 bits (123), Expect = 4e-07
Identities = 31/63 (49%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 163 GEKGPPRGGGR-------GGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGR--GGGFR 213
G G RGGGR GG GG GG GGG GGG+ GGGGG GG G GF
Sbjct: 194 GRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFG 253
Query: 214 GRG 216
G G
Sbjct: 254 GFG 256
Score = 51.2 bits (121), Expect = 7e-07
Identities = 33/68 (48%), Positives = 34/68 (50%), Gaps = 20/68 (29%)
Query: 6 GGRGGFNRGGG----------GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGG-- 53
GGRGG RGGG GGG+N G GGGGGGG N GGG GG GG
Sbjct: 193 GGRGGRGRGGGRDQNGLSKGGGGGYNSYGGY-----GGGGGGGYNAYGGGGGGSSYGGSD 247
Query: 54 ---GRGGF 58
G GGF
Sbjct: 248 YGNGFGGF 255
Score = 50.4 bits (119), Expect = 1e-06
Identities = 36/90 (40%), Positives = 43/90 (47%), Gaps = 27/90 (30%)
Query: 4 RGGGR--GGFNRGGGGG-----GFNRGGSSNHFRGGGGGGG---GGNFRGGGRGGFGR-- 51
RGGGR G ++GGGGG G+ GG + GGGGGG GG+ G G GGFG
Sbjct: 200 RGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYS 259
Query: 52 -------------GGGRGGFNKG--QDQGP 66
GGG GG + G + GP
Sbjct: 260 QHQSSYGPMKSGGGGGGGGSSWGGRSNSGP 289
Score = 47.8 bits (112), Expect = 7e-06
Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 3 FRGGGRGGF--NRGGGGGGFNRGGSSNHFRGGGGGGGG---GNFRGGGRGGFGRGGGRGG 57
+ GGG GG +RGG GG GG + GGGGG G + GGG GG+ GG GG
Sbjct: 180 YSGGGGGGSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGG 239
Query: 58 FNK--GQDQG 65
+ G D G
Sbjct: 240 GSSYGGSDYG 249
Score = 40.8 bits (94), Expect = 9e-04
Identities = 21/37 (56%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGG 202
GP + GG GG GGG GGR G +RGG GGGGG
Sbjct: 266 GPMKSGGGGG-GGGSSWGGRSNS--GPYRGGYGGGGG 299
Score = 39.3 bits (90), Expect = 0.003
Identities = 31/78 (39%), Positives = 32/78 (41%), Gaps = 24/78 (30%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGG---GRG-GGF--------------RGGRGGGGGGF 204
G G GGG GGG GG GG G G GGF GG GGGGG
Sbjct: 221 GGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSS 280
Query: 205 RGGRG------GGFRGRG 216
GGR GG+ G G
Sbjct: 281 WGGRSNSGPYRGGYGGGG 298
Score = 36.6 bits (83), Expect = 0.017
Identities = 29/71 (40%), Positives = 31/71 (43%), Gaps = 23/71 (32%)
Query: 164 EKGPPRGGGRG----GRGGGRGGGG---RGGGRGGGFRGGR--GGGGGGF---------- 204
+ G +GGG G G GG GGGG GGG GG GG G G GGF
Sbjct: 206 QNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSY 265
Query: 205 ----RGGRGGG 211
GG GGG
Sbjct: 266 GPMKSGGGGGG 276
Score = 35.4 bits (80), Expect = 0.038
Identities = 19/31 (61%), Positives = 22/31 (70%), Gaps = 4/31 (12%)
Query: 14 GGGGGGFNRGGSSNH--FRGG--GGGGGGGN 40
GGGGGG + GG SN +RGG GGGG GG+
Sbjct: 273 GGGGGGSSWGGRSNSGPYRGGYGGGGGYGGS 303
>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
isoform d [Homo sapiens]
Length = 756
Score = 57.0 bits (136), Expect = 1e-08
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 24/89 (26%)
Query: 3 FRGGGRGGFNRGGGGGGFNR-------GGSSNHFRG-GGGGGGGGNFRGG----GRGGFG 50
F G GGF GGGGGF R GG+ F+ GGG GGGGN+RGG G GG+
Sbjct: 509 FDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYS 568
Query: 51 RG------------GGRGGFNKGQDQGPP 67
+ RG +N+ Q PP
Sbjct: 569 QNRWGNNNRDNNNSNNRGSYNRAPQQQPP 597
Score = 50.4 bits (119), Expect = 1e-06
Identities = 32/65 (49%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 161 PPGEKGPPRGGGRGGRGGGRGGG-------GRGGGRGGGF--RGGRGGGGGGFRGG---- 207
PP EK GG G RG G GGG G GG GGF RGG GGGG +RGG
Sbjct: 503 PPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRS 562
Query: 208 RGGGF 212
GGG+
Sbjct: 563 GGGGY 567
Score = 45.4 bits (106), Expect = 4e-05
Identities = 36/85 (42%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 145 YIDPYKLLPLQRF----LPRPPGEKGPPRGGGRGGRGGGRGGGG-RGGGRGGGF-----R 194
++D + LQR L R E+G G R RGGGG RG G GGGF R
Sbjct: 473 FLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENR 532
Query: 195 GGRGGGGGGFR---GGRGGGFRGRG 216
G GG GGF+ GG GGG RG
Sbjct: 533 GPPGGNRGGFQNRGGGSGGGGNYRG 557
Score = 40.8 bits (94), Expect = 9e-04
Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 163 GEKGPPRGGG------RGGRGGGRGG-GGRGGGRGGG--FRGG-RGGGGGGFRGGRGG 210
G +G GGG RG GG RGG RGGG GGG +RGG GGGG+ R G
Sbjct: 516 GFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWG 573
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG 199
P G +G + G G GGG GG GGG+ R G
Sbjct: 535 PGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWG 573
>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
isoform a [Homo sapiens]
Length = 856
Score = 57.0 bits (136), Expect = 1e-08
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 24/89 (26%)
Query: 3 FRGGGRGGFNRGGGGGGFNR-------GGSSNHFRG-GGGGGGGGNFRGG----GRGGFG 50
F G GGF GGGGGF R GG+ F+ GGG GGGGN+RGG G GG+
Sbjct: 609 FDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYS 668
Query: 51 RG------------GGRGGFNKGQDQGPP 67
+ RG +N+ Q PP
Sbjct: 669 QNRWGNNNRDNNNSNNRGSYNRAPQQQPP 697
Score = 50.4 bits (119), Expect = 1e-06
Identities = 32/65 (49%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 161 PPGEKGPPRGGGRGGRGGGRGGG-------GRGGGRGGGF--RGGRGGGGGGFRGG---- 207
PP EK GG G RG G GGG G GG GGF RGG GGGG +RGG
Sbjct: 603 PPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRS 662
Query: 208 RGGGF 212
GGG+
Sbjct: 663 GGGGY 667
Score = 45.4 bits (106), Expect = 4e-05
Identities = 36/85 (42%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 145 YIDPYKLLPLQRF----LPRPPGEKGPPRGGGRGGRGGGRGGGG-RGGGRGGGF-----R 194
++D + LQR L R E+G G R RGGGG RG G GGGF R
Sbjct: 573 FLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENR 632
Query: 195 GGRGGGGGGFR---GGRGGGFRGRG 216
G GG GGF+ GG GGG RG
Sbjct: 633 GPPGGNRGGFQNRGGGSGGGGNYRG 657
Score = 40.8 bits (94), Expect = 9e-04
Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 163 GEKGPPRGGG------RGGRGGGRGG-GGRGGGRGGG--FRGG-RGGGGGGFRGGRGG 210
G +G GGG RG GG RGG RGGG GGG +RGG GGGG+ R G
Sbjct: 616 GFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWG 673
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG 199
P G +G + G G GGG GG GGG+ R G
Sbjct: 635 PGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWG 673
>gi|56699482 hypothetical protein LOC25940 [Homo sapiens]
Length = 518
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRG----GGFRGGRGGGGGGFRGG--RGGGFRGRG 216
G G +GGGRGGR GG GGRGGGRG GG+ G GGGGG++ G R GF+ G
Sbjct: 350 GRGGHEQGGGRGGR-GGYDHGGRGGGRGNKHQGGWTDGGSGGGGGYQDGGYRDSGFQPGG 408
Query: 217 H 217
+
Sbjct: 409 Y 409
Score = 53.5 bits (127), Expect = 1e-07
Identities = 36/66 (54%), Positives = 38/66 (57%), Gaps = 15/66 (22%)
Query: 161 PPGEK---GPPRGGGRGGRGGGRGG------GGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211
PP +K GP + GGRGGGRGG GGRGG GG RGGRGG GGRGGG
Sbjct: 320 PPWQKRQDGPQQQ--TGGRGGGRGGYEHSSYGGRGGHEQGGGRGGRGGYD---HGGRGGG 374
Query: 212 FRGRGH 217
RG H
Sbjct: 375 -RGNKH 379
Score = 53.1 bits (126), Expect = 2e-07
Identities = 32/67 (47%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGG---GGGGGGGNFRGGG--RGGFGRGGGRGGF 58
+GGGRGG RGG G GG N +GG GG GGGG ++ GG GF GG GG
Sbjct: 356 QGGGRGG--RGGYDHGGRGGGRGNKHQGGWTDGGSGGGGGYQDGGYRDSGFQPGGYHGGH 413
Query: 59 NKGQDQG 65
+ G QG
Sbjct: 414 SSGGYQG 420
Score = 50.8 bits (120), Expect = 9e-07
Identities = 31/64 (48%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 4 RGGGRGGFNR---GGGGG---GFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGG 57
RGGGRGG+ GG GG G RGG + GG GGG G +GG G G GGG GG
Sbjct: 336 RGGGRGGYEHSSYGGRGGHEQGGGRGGRGGYDHGGRGGGRGNKHQGGWTDG-GSGGG-GG 393
Query: 58 FNKG 61
+ G
Sbjct: 394 YQDG 397
Score = 48.9 bits (115), Expect = 3e-06
Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 20/82 (24%)
Query: 4 RGGGRGGFNRG-------GGGGGFNRGG-SSNHFRGGG--GGGGGGNFRGGGRGGFG--- 50
RGGGRG ++G GGGGG+ GG + F+ GG GG G ++GGG GGF
Sbjct: 371 RGGGRGNKHQGGWTDGGSGGGGGYQDGGYRDSGFQPGGYHGGHSSGGYQGGGYGGFQTSS 430
Query: 51 -------RGGGRGGFNKGQDQG 65
+GGG N+ QD G
Sbjct: 431 SYTGSGYQGGGYQQDNRYQDGG 452
Score = 48.9 bits (115), Expect = 3e-06
Identities = 34/73 (46%), Positives = 37/73 (50%), Gaps = 26/73 (35%)
Query: 166 GPPRGGGRGG-------RGGGRGGGG---------------RGGGRGGGFRGGRGGGGGG 203
G +GGG GG G G GGG RGGGRGG RGGRGG GG
Sbjct: 416 GGYQGGGYGGFQTSSSYTGSGYQGGGYQQDNRYQDGGHHGDRGGGRGG--RGGRGGRGG- 472
Query: 204 FRGGRGGGFRGRG 216
R G+GGG+ GRG
Sbjct: 473 -RAGQGGGWGGRG 484
Score = 47.8 bits (112), Expect = 7e-06
Identities = 30/67 (44%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 3 FRGGGRGGFNRGGG--GGGFNRGG--SSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGF 58
++GGG GGF G G+ GG N ++ GG G RGGGRGG G GGRGG
Sbjct: 418 YQGGGYGGFQTSSSYTGSGYQGGGYQQDNRYQDGGHHGD----RGGGRGGRGGRGGRGG- 472
Query: 59 NKGQDQG 65
GQ G
Sbjct: 473 RAGQGGG 479
Score = 47.8 bits (112), Expect = 7e-06
Identities = 28/47 (59%), Positives = 30/47 (63%), Gaps = 7/47 (14%)
Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGG----RGGGF 212
GG G RGGGRGG G GGRGG R G+GGG GG RG +GG F
Sbjct: 451 GGHHGDRGGGRGGRGGRGGRGG--RAGQGGGWGG-RGSQNYHQGGQF 494
Score = 43.5 bits (101), Expect = 1e-04
Identities = 27/51 (52%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 14 GGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF---GRGGGRGGFNKG 61
GG GGG RGG + GG GG G R GGRGG+ GRGGGRG ++G
Sbjct: 334 GGRGGG--RGGYEHSSYGGRGGHEQGGGR-GGRGGYDHGGRGGGRGNKHQG 381
Score = 41.6 bits (96), Expect = 5e-04
Identities = 32/63 (50%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
Query: 161 PPGEKGPP---RGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG-GGGGFRGGRGG---GFR 213
PP + PP R G + GGRGGG RGG + GGRGG GG RGGRGG G R
Sbjct: 314 PPPPEMPPWQKRQDGPQQQTGGRGGG-RGGYEHSSY-GGRGGHEQGGGRGGRGGYDHGGR 371
Query: 214 GRG 216
G G
Sbjct: 372 GGG 374
Score = 39.3 bits (90), Expect = 0.003
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 9/61 (14%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGG-GFRGGRGGG-------GGGFRGGRGGGFRG 214
G++G RGG RGGRGG G G+GGG GG G + GG GG++ G +G
Sbjct: 455 GDRGGGRGG-RGGRGGRGGRAGQGGGWGGRGSQNYHQGGQFEQHFQHGGYQYNHSGFGQG 513
Query: 215 R 215
R
Sbjct: 514 R 514
Score = 37.4 bits (85), Expect = 0.010
Identities = 21/48 (43%), Positives = 24/48 (50%)
Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG 50
++GGG NR GG G RGG GG GG +GGG GG G
Sbjct: 437 YQGGGYQQDNRYQDGGHHGDRGGGRGGRGGRGGRGGRAGQGGGWGGRG 484
Score = 37.4 bits (85), Expect = 0.010
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGG--NFRGGGR--GGFGRGG---GR 55
++ GG G GG GG RGG GGG GG G N+ GG+ F GG
Sbjct: 448 YQDGGHHGDRGGGRGGRGGRGGRGGRAGQGGGWGGRGSQNYHQGGQFEQHFQHGGYQYNH 507
Query: 56 GGFNKGQ 62
GF +G+
Sbjct: 508 SGFGQGR 514
Score = 36.2 bits (82), Expect = 0.022
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGG--RGGGGGGFRGG---RGGGFRGRGH 217
G GGG GG R G + GG GG G +GGG GGF+ G G++G G+
Sbjct: 386 GGSGGGGGYQDGGYRDSGFQPGGYHGGHSSGGYQGGGYGGFQTSSSYTGSGYQGGGY 442
Score = 35.8 bits (81), Expect = 0.029
Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 24 GSSNHFRGGGGGGGGGNFRG-GGRGGFGRGGGRGGFNKGQDQG 65
G G GGG GG GGRGG +GGGRGG G D G
Sbjct: 328 GPQQQTGGRGGGRGGYEHSSYGGRGGHEQGGGRGG-RGGYDHG 369
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/73 (43%), Positives = 34/73 (46%)
Query: 7 GRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGP 66
G GG GGGG + G GGGGG GGG GGG G G GGG GG G P
Sbjct: 130 GAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGGSAHP 189
Query: 67 PERVVLLGEFLHP 79
+ LG HP
Sbjct: 190 HPHMHSLGHLSHP 202
Score = 55.8 bits (133), Expect = 3e-08
Identities = 31/54 (57%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 163 GEKGPPRGGGR-----GGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211
G G GGG GG GG GGGG GGG GGG GG GGGGGG GG GG
Sbjct: 132 GGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGG 185
Score = 53.9 bits (128), Expect = 1e-07
Identities = 28/45 (62%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
GG G GGG G GG GGG GGG GG GGG GG GG GGG G
Sbjct: 141 GGAHDGPGGGGGPGG-GGGPGGGPGGGGGGGPGGGGGGPGGGLLG 184
Score = 51.6 bits (122), Expect = 5e-07
Identities = 28/49 (57%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211
G G G GG G GGGG GG GGG GG GGGGGG GG GGG
Sbjct: 130 GAGGAGAAAGGGGAHDGPGGGGGPGG-GGGPGGGPGGGGGGGPGGGGGG 177
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/45 (55%), Positives = 25/45 (55%)
Query: 172 GRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
G GG G GGGG G GGG G GGG GG GG GGG G G
Sbjct: 130 GAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGG 174
Score = 46.2 bits (108), Expect = 2e-05
Identities = 25/40 (62%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG 200
P G GP GGG GG GG GGGG GGG GGG GG GG
Sbjct: 147 PGGGGGPGGGGGPGGGPGGGGGGGPGGG-GGGPGGGLLGG 185
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/68 (47%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
Query: 162 PGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG-------------GGGFRGGR 208
PG P GGG GG GGG GG G GGG GG GG G G GGG GG
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 209 GGGFRGRG 216
GG G G
Sbjct: 301 GGSSAGYG 308
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/72 (43%), Positives = 33/72 (45%), Gaps = 18/72 (25%)
Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRG-------------GF 49
+ G R G GGGGGG GGS GGGGGGGG G G G G
Sbjct: 240 YPGYSRPGAGGGGGGGGGGGGGS-----GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
Query: 50 GRGGGRGGFNKG 61
G GGG GG + G
Sbjct: 295 GGGGGYGGSSAG 306
Score = 47.0 bits (110), Expect = 1e-05
Identities = 27/58 (46%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 159 PRPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
P +G P G R G G GGG GGG GG GGGGGG GG G G G G
Sbjct: 224 PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGG--GGAGAGGAGAG 279
Score = 45.8 bits (107), Expect = 3e-05
Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRG-----------GRGGGGGGFRGGR 208
RP G GGG GG GG GGGG G G GG G GGGGGG GG
Sbjct: 245 RPGAGGGGGGGGGGGGGSGG-GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS 303
Query: 209 GGGF 212
G+
Sbjct: 304 SAGY 307
Score = 42.4 bits (98), Expect = 3e-04
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 14/64 (21%)
Query: 5 GGGRGGFNRGGGGGGFNRGGS-------SNHFRGGGGGGGGGNFRGGGRGGFG------- 50
GGG GG GGGGGG GG+ + GGGGG GG G+G
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
Query: 51 RGGG 54
+GGG
Sbjct: 316 QGGG 319
Score = 40.0 bits (92), Expect = 0.002
Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 24/67 (35%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-------------GGRGGFGR 51
GGG GG G GGGG GGGG G GG G GG GG G
Sbjct: 252 GGGGGGGGGGSGGGG-----------GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 52 GGGRGGF 58
GG G+
Sbjct: 301 GGSSAGY 307
Score = 38.5 bits (88), Expect = 0.004
Identities = 21/38 (55%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 27 NHFRG---GGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
NH+ G G GGGGG GGG GG G GGG GG G
Sbjct: 238 NHYPGYSRPGAGGGGGG-GGGGGGGSGGGGGGGGAGAG 274
Score = 36.6 bits (83), Expect = 0.017
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 36/109 (33%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFR-----------GGGGGGGGGNFRGGG-------R 46
GGG G GGGGG G + GGGGGG GG+ G G +
Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316
Query: 47 GG---FGRGGG-------------RGGFNK--GQDQGPPERVVLLGEFL 77
GG G GGG GGF + GQ+Q P L + L
Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
Score = 35.0 bits (79), Expect = 0.049
Identities = 30/97 (30%), Positives = 32/97 (32%), Gaps = 46/97 (47%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRG---------------------GGRGGGFRG------ 195
G G GGG GG GGG GGGG G GG GGG+ G
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
Query: 196 --------------GRGGGGG-----GFRGGRGGGFR 213
G GGGG G GGF+
Sbjct: 309 VLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQ 345
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/68 (47%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
Query: 162 PGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG-------------GGGFRGGR 208
PG P GGG GG GGG GG G GGG GG GG G G GGG GG
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 209 GGGFRGRG 216
GG G G
Sbjct: 301 GGSSAGYG 308
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/72 (43%), Positives = 33/72 (45%), Gaps = 18/72 (25%)
Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRG-------------GF 49
+ G R G GGGGGG GGS GGGGGGGG G G G G
Sbjct: 240 YPGYSRPGAGGGGGGGGGGGGGS-----GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
Query: 50 GRGGGRGGFNKG 61
G GGG GG + G
Sbjct: 295 GGGGGYGGSSAG 306
Score = 47.0 bits (110), Expect = 1e-05
Identities = 27/58 (46%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 159 PRPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
P +G P G R G G GGG GGG GG GGGGGG GG G G G G
Sbjct: 224 PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGG--GGAGAGGAGAG 279
Score = 45.8 bits (107), Expect = 3e-05
Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRG-----------GRGGGGGGFRGGR 208
RP G GGG GG GG GGGG G G GG G GGGGGG GG
Sbjct: 245 RPGAGGGGGGGGGGGGGSGG-GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS 303
Query: 209 GGGF 212
G+
Sbjct: 304 SAGY 307
Score = 42.4 bits (98), Expect = 3e-04
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 14/64 (21%)
Query: 5 GGGRGGFNRGGGGGGFNRGGS-------SNHFRGGGGGGGGGNFRGGGRGGFG------- 50
GGG GG GGGGGG GG+ + GGGGG GG G+G
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
Query: 51 RGGG 54
+GGG
Sbjct: 316 QGGG 319
Score = 40.0 bits (92), Expect = 0.002
Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 24/67 (35%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-------------GGRGGFGR 51
GGG GG G GGGG GGGG G GG G GG GG G
Sbjct: 252 GGGGGGGGGGSGGGG-----------GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 52 GGGRGGF 58
GG G+
Sbjct: 301 GGSSAGY 307
Score = 38.5 bits (88), Expect = 0.004
Identities = 21/38 (55%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 27 NHFRG---GGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
NH+ G G GGGGG GGG GG G GGG GG G
Sbjct: 238 NHYPGYSRPGAGGGGGG-GGGGGGGSGGGGGGGGAGAG 274
Score = 36.6 bits (83), Expect = 0.017
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 36/109 (33%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFR-----------GGGGGGGGGNFRGGG-------R 46
GGG G GGGGG G + GGGGGG GG+ G G +
Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316
Query: 47 GG---FGRGGG-------------RGGFNK--GQDQGPPERVVLLGEFL 77
GG G GGG GGF + GQ+Q P L + L
Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
Score = 35.0 bits (79), Expect = 0.049
Identities = 30/97 (30%), Positives = 32/97 (32%), Gaps = 46/97 (47%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRG---------------------GGRGGGFRG------ 195
G G GGG GG GGG GGGG G GG GGG+ G
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
Query: 196 --------------GRGGGGG-----GFRGGRGGGFR 213
G GGGG G GGF+
Sbjct: 309 VLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQ 345
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/68 (47%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
Query: 162 PGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG-------------GGGFRGGR 208
PG P GGG GG GGG GG G GGG GG GG G G GGG GG
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 209 GGGFRGRG 216
GG G G
Sbjct: 301 GGSSAGYG 308
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/72 (43%), Positives = 33/72 (45%), Gaps = 18/72 (25%)
Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRG-------------GF 49
+ G R G GGGGGG GGS GGGGGGGG G G G G
Sbjct: 240 YPGYSRPGAGGGGGGGGGGGGGS-----GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
Query: 50 GRGGGRGGFNKG 61
G GGG GG + G
Sbjct: 295 GGGGGYGGSSAG 306
Score = 47.0 bits (110), Expect = 1e-05
Identities = 27/58 (46%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 159 PRPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216
P +G P G R G G GGG GGG GG GGGGGG GG G G G G
Sbjct: 224 PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGG--GGAGAGGAGAG 279
Score = 45.8 bits (107), Expect = 3e-05
Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRG-----------GRGGGGGGFRGGR 208
RP G GGG GG GG GGGG G G GG G GGGGGG GG
Sbjct: 245 RPGAGGGGGGGGGGGGGSGG-GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS 303
Query: 209 GGGF 212
G+
Sbjct: 304 SAGY 307
Score = 42.4 bits (98), Expect = 3e-04
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 14/64 (21%)
Query: 5 GGGRGGFNRGGGGGGFNRGGS-------SNHFRGGGGGGGGGNFRGGGRGGFG------- 50
GGG GG GGGGGG GG+ + GGGGG GG G+G
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
Query: 51 RGGG 54
+GGG
Sbjct: 316 QGGG 319
Score = 40.0 bits (92), Expect = 0.002
Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 24/67 (35%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-------------GGRGGFGR 51
GGG GG G GGGG GGGG G GG G GG GG G
Sbjct: 252 GGGGGGGGGGSGGGG-----------GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 52 GGGRGGF 58
GG G+
Sbjct: 301 GGSSAGY 307
Score = 38.5 bits (88), Expect = 0.004
Identities = 21/38 (55%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 27 NHFRG---GGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
NH+ G G GGGGG GGG GG G GGG GG G
Sbjct: 238 NHYPGYSRPGAGGGGGG-GGGGGGGSGGGGGGGGAGAG 274
Score = 36.6 bits (83), Expect = 0.017
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 36/109 (33%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFR-----------GGGGGGGGGNFRGGG-------R 46
GGG G GGGGG G + GGGGGG GG+ G G +
Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316
Query: 47 GG---FGRGGG-------------RGGFNK--GQDQGPPERVVLLGEFL 77
GG G GGG GGF + GQ+Q P L + L
Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
Score = 35.0 bits (79), Expect = 0.049
Identities = 30/97 (30%), Positives = 32/97 (32%), Gaps = 46/97 (47%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRG---------------------GGRGGGFRG------ 195
G G GGG GG GGG GGGG G GG GGG+ G
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
Query: 196 --------------GRGGGGG-----GFRGGRGGGFR 213
G GGGG G GGF+
Sbjct: 309 VLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQ 345
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/61 (54%), Positives = 33/61 (54%), Gaps = 10/61 (16%)
Query: 166 GPPRGGG--RGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGG--------RGGGFRGR 215
GP GGG RGG G GGG GGG GGG RG R G GGG RGG R RGR
Sbjct: 156 GPGAGGGAERGGSGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGR 215
Query: 216 G 216
G
Sbjct: 216 G 216
Score = 53.9 bits (128), Expect = 1e-07
Identities = 29/49 (59%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 15 GGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGG-FGRGGGRGGFNKGQ 62
G GGG RGGS GGGGGGGGG GGGRG GRGGG G + Q
Sbjct: 158 GAGGGAERGGSGRSSAGGGGGGGGG---GGGRGSRRGRGGGERGGPRAQ 203
Score = 46.2 bits (108), Expect = 2e-05
Identities = 26/51 (50%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGR 55
G G GG GG G + GG GGGGGGGGG GRGG RGG R
Sbjct: 156 GPGAGGGAERGGSGRSSAGGG-----GGGGGGGGGRGSRRGRGGGERGGPR 201
Score = 32.3 bits (72), Expect = 0.32
Identities = 15/31 (48%), Positives = 16/31 (51%)
Query: 32 GGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62
G G GGG G GR G GGG GG G+
Sbjct: 156 GPGAGGGAERGGSGRSSAGGGGGGGGGGGGR 186
Score = 28.9 bits (63), Expect = 3.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 34 GGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65
G G GG GG G GGG GG G +G
Sbjct: 156 GPGAGGGAERGGSGRSSAGGGGGGGGGGGGRG 187
>gi|109148552 keratin 3 [Homo sapiens]
Length = 628
Score = 56.6 bits (135), Expect = 2e-08
Identities = 29/55 (52%), Positives = 31/55 (56%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFN 59
GGG GG GG GGGF+ GG S G GGGGG G GGG GF G G G +
Sbjct: 539 GGGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSGGSGFGSIS 593
Score = 55.5 bits (132), Expect = 4e-08
Identities = 32/51 (62%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 170 GGGR-GGRGGGRGGGGRGGGRGGGFRGGRGGG-GGGFRGGRG--GGFRGRG 216
GG R GG GGGR GG GGGF G GGG GGGF GGRG GGF G G
Sbjct: 73 GGSRAGGFGGGRSSCAFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGGAG 123
Score = 53.9 bits (128), Expect = 1e-07
Identities = 30/49 (61%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 170 GGGRGGRGGGRGGG-GRGGGRGGGF-RGGRGGGGGGFRGGRGGGFRGRG 216
GG GG GGG GGG GGG G GF RGG GG GGGF GG G G G
Sbjct: 540 GGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSGGSG 588
Score = 52.8 bits (125), Expect = 2e-07
Identities = 31/66 (46%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
+F GG GGF G GGGF G GGG GG GG GG GG G GG GGF
Sbjct: 88 AFAGGYGGGFG-SGYGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGS 146
Query: 62 QDQGPP 67
G P
Sbjct: 147 GGFGGP 152
Score = 52.4 bits (124), Expect = 3e-07
Identities = 35/63 (55%), Positives = 36/63 (57%), Gaps = 10/63 (15%)
Query: 163 GEKGPPRGGGR------GGRGGGRGGGGRGGGRGGGFRGGRG-GGGGGFRGGRG--GGFR 213
G + GGGR GG GGG G G GGG GGGF GGRG GGG G GG G GGF
Sbjct: 74 GSRAGGFGGGRSSCAFAGGYGGGFGSG-YGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFG 132
Query: 214 GRG 216
G G
Sbjct: 133 GAG 135
Score = 51.6 bits (122), Expect = 5e-07
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 114 DEIFGQLRDFY--FSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGG 171
D++ LRD+ +VKL+ +++ ++++KL + + Y++
Sbjct: 476 DDLARLLRDYQELMNVKLALDVEIATYRKLLEG--EEYRMSGECPSAVSISVVSSSTTSA 533
Query: 172 GRGGRGGGRGGGGRGGGRGGGFRGGRG-------GGGGGFRGGRGGGFRG 214
GG GGG GGG GGG GGGF G G GGGGG GG GGG G
Sbjct: 534 SAGGYGGGYGGG-MGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSG 582
Score = 51.2 bits (121), Expect = 7e-07
Identities = 36/84 (42%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 3 FRGGGRGGFNRGGG-GGGFNRGGSSNHFRGGGGGGGGGNFRG-GGRGGFGRGGGRGGFNK 60
F GG GG GGG GG GG+ F G GG GG G F G GG GG G G GGF
Sbjct: 105 FGGGFGGGRGMGGGFGGAGGFGGAGG-FGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGP 163
Query: 61 GQDQGPPERVVLLGEFLHPCEDDI 84
G G + V + L P +I
Sbjct: 164 GGFPGGIQEVTINQSLLQPLNVEI 187
Score = 50.1 bits (118), Expect = 1e-06
Identities = 33/70 (47%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 5 GGGR-GGFNRGGG------GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGG 57
GG R GGF GGG GG+ G S + G GGG GGG GGG GG G GG GG
Sbjct: 73 GGSRAGGF--GGGRSSCAFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGGAGGFGGAGG 130
Query: 58 FNKGQDQGPP 67
F G P
Sbjct: 131 FGGAGGFGGP 140
Score = 50.1 bits (118), Expect = 1e-06
Identities = 27/51 (52%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 163 GEKGPPRGGGRGG--RGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211
G G GGG GG GG G G G G GGG GG GGG GF GG G G
Sbjct: 540 GGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSGGSGFG 590
Score = 49.7 bits (117), Expect = 2e-06
Identities = 32/54 (59%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 170 GGGRG-GRGGGRGGG-GRGGGRGGGFRGGRG-GGGGGFRGGRG----GGFRGRG 216
GGG G G GGG GGG G G G GGGF G G GG GGF G G GGF G G
Sbjct: 94 GGGFGSGYGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSG 147
Score = 48.5 bits (114), Expect = 4e-06
Identities = 28/51 (54%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRG----GRGGGFRGRG 216
GG GG GGGRG GG GG GG G GG GGF G G GGF G G
Sbjct: 103 GGFGGGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPG 153
Score = 48.5 bits (114), Expect = 4e-06
Identities = 31/68 (45%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 5 GGGRGGFNRGGGGG-GFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGR------GGGRGG 57
GG GGF+ GGG G GF RGG GGG GGG F GG GFG G GG
Sbjct: 548 GGLGGGFSAGGGSGSGFGRGGGGGI--GGGFGGGSSGFSGG--SGFGSISGARYGVSGGG 603
Query: 58 FNKGQDQG 65
F+ ++G
Sbjct: 604 FSSASNRG 611
Score = 46.6 bits (109), Expect = 2e-05
Identities = 31/61 (50%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64
GG GG+ GGG GG GG S GGG G G G GGG GG G GGG GF+ G
Sbjct: 536 GGYGGGY--GGGMGGGLGGGFS---AGGGSGSGFGRGGGGGIGG-GFGGGSSGFSGGSGF 589
Query: 65 G 65
G
Sbjct: 590 G 590
Score = 45.4 bits (106), Expect = 4e-05
Identities = 30/58 (51%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 5 GGGRG-GFNRGGGGG---GFNRGGSSNHFRGGGGGGG-GGNFRGGGRGGFGRGGGRGG 57
GGG G GF RGGGGG GF GG S+ F GG G G G G GGF RGG
Sbjct: 557 GGGSGSGFGRGGGGGIGGGF--GGGSSGFSGGSGFGSISGARYGVSGGGFSSASNRGG 612
Score = 45.1 bits (105), Expect = 5e-05
Identities = 29/57 (50%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGG-------GFRGGRG-GGFRG 214
G GGG GG GG G GG GG G G GG GG GG G GG G GGF G
Sbjct: 112 GRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGPGGFPG 168
Score = 44.7 bits (104), Expect = 6e-05
Identities = 26/48 (54%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGG-GGFRGGR----GGGF 212
GGG G G GGGG GGG GGG G GG G G G R GGGF
Sbjct: 557 GGGSGSGFGRGGGGGIGGGFGGGSSGFSGGSGFGSISGARYGVSGGGF 604
Score = 43.5 bits (101), Expect = 1e-04
Identities = 29/72 (40%), Positives = 29/72 (40%), Gaps = 27/72 (37%)
Query: 170 GGGRGGRGGGRGGGG---------------------RGGGRGGGFRGGR------GGGGG 202
GG GG G R G G GG R GGF GGR GG GG
Sbjct: 36 GGAGGGAYGFRSGAGGFGSRSLYNLGGNKSISISVAAGGSRAGGFGGGRSSCAFAGGYGG 95
Query: 203 GFRGGRGGGFRG 214
GF G GGGF G
Sbjct: 96 GFGSGYGGGFGG 107
Score = 42.7 bits (99), Expect = 2e-04
Identities = 33/87 (37%), Positives = 33/87 (37%), Gaps = 33/87 (37%)
Query: 5 GGGRGGFNRGGGG--------------------------GGFNRGGSSNHFRGGGGGGGG 38
GGG GF G GG GGF G SS F GG GGG G
Sbjct: 39 GGGAYGFRSGAGGFGSRSLYNLGGNKSISISVAAGGSRAGGFGGGRSSCAFAGGYGGGFG 98
Query: 39 -------GNFRGGGRGGFGRGGGRGGF 58
G GGGRG G GG GGF
Sbjct: 99 SGYGGGFGGGFGGGRGMGGGFGGAGGF 125
Score = 42.4 bits (98), Expect = 3e-04
Identities = 28/52 (53%), Positives = 28/52 (53%), Gaps = 9/52 (17%)
Query: 170 GGGRG---GRGGGRGGGGRGGGRGGGFRGGRG--GGGGGFRG----GRGGGF 212
GGGRG G GG G GG GG G G GG G GG GGF G G GGF
Sbjct: 110 GGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGF 161
Score = 39.3 bits (90), Expect = 0.003
Identities = 22/33 (66%), Positives = 23/33 (69%), Gaps = 4/33 (12%)
Query: 187 GGRGGGFRGGRGGG-GGGFR--GGRGGGFRGRG 216
GG GGG+ GG GGG GGGF GG G GF GRG
Sbjct: 536 GGYGGGYGGGMGGGLGGGFSAGGGSGSGF-GRG 567
Score = 38.1 bits (87), Expect = 0.006
Identities = 23/51 (45%), Positives = 24/51 (47%)
Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFR 213
G G GG GG GG G GG GG G G G G GG GG GG +
Sbjct: 121 GAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGPGGFPGGIQ 171
Score = 35.4 bits (80), Expect = 0.038
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 25 SSNHFRGGGGGGGGGNFRGGG-RGGFGRGGGRG-GFNKGQDQG 65
S+ GG GGG G GGG GGF GGG G GF +G G
Sbjct: 529 STTSASAGGYGGGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGG 571
Score = 35.0 bits (79), Expect = 0.049
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 9/57 (15%)
Query: 166 GPPRGGGRGGRGG--GRGGGGRGGGRGG-------GFRGGRGGGGGGFRGGRGGGFR 213
G G GRGG GG G GGG G GG G R G GGG RGG +
Sbjct: 559 GSGSGFGRGGGGGIGGGFGGGSSGFSGGSGFGSISGARYGVSGGGFSSASNRGGSIK 615
Score = 32.7 bits (73), Expect = 0.24
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 169 RGGGRGGRGGGRGGGGRGGGRGGGFR-------GGRGGGGGGFRGGRGG 210
R + GG +G GR G R GG GGG GFR G GG
Sbjct: 3 RQASKTSGGGSQGFSGRSAVVSGSSRMSCVAHSGGAGGGAYGFRSGAGG 51
Score = 30.8 bits (68), Expect = 0.92
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 5 GGGRGGFN-RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG 50
GGG GF+ R G +R H GG GGG FR G GGFG
Sbjct: 10 GGGSQGFSGRSAVVSGSSRMSCVAH--SGGAGGGAYGFRSGA-GGFG 53
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.153 0.498
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,955,221
Number of Sequences: 37866
Number of extensions: 1021761
Number of successful extensions: 56275
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 324
Number of HSP's that attempted gapping in prelim test: 10077
Number of HSP's gapped (non-prelim): 21947
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.