Guide to the Human Genome
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Name: KIAA1644 Sequence: fasta or formatted (199aa) NCBI GI: 150010659
Description:

hypothetical protein LOC85352

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         16           1
 C cysteine            4.0          8           2
 D aspartate           3.0          6           1
 E glutamate           2.0          4           1
 F phenylalanine       5.5         11           2
 G glycine             6.0         12           1
 H histidine           4.5          9           2
 I isoleucine          2.0          4           1
 K lysine              2.5          5           1
 L leucine            10.6         21           2
 M methionine          3.5          7           1
 N asparagine          5.0         10           2
 P proline             8.0         16           3
 Q glutamine           6.0         12           2
 R arginine            5.5         11           2
 S serine              6.5         13           3
 T threonine           4.5          9           1
 V valine              5.5         11           1
 W tryptophan          2.0          4           1
 Y tyrosine            5.0         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC85352 
SHISA4                0.045   shisa homolog 4 
SHISA2                0.042   shisa homolog 2 
SHISA3                0.032   shisa homolog 3 
FASLG                 0.027   fas ligand 
SETD1A                0.025   SET domain containing 1A 
PSORS1C2              0.022   SPR1 protein 
IQSEC2                0.022   IQ motif and Sec7 domain 2 isoform 2 
IQSEC2                0.022   IQ motif and Sec7 domain 2 isoform1 
C9orf75               0.022   hypothetical protein LOC286262 isoform 2 
C9orf75               0.022   hypothetical protein LOC286262 isoform 1 
SYDE1                 0.022   synapse defective 1, Rho GTPase, homolog 1 
ZFHX3                 0.020   AT-binding transcription factor 1 
FOXG1                 0.020   forkhead box G1 
ZFPM1                 0.020   zinc finger protein, multitype 1 
PRB3                  0.020   proline-rich protein BstNI subfamily 3 precursor [H...
TMEM198               0.020   transmembrane protein 198 
LOC100293654          0.020   PREDICTED: hypothetical protein 
LOC100290979          0.020   PREDICTED: hypothetical protein XP_002347837 
LOC100288912          0.020   PREDICTED: hypothetical protein XP_002343614 
PCNT                  0.020   pericentrin 
TRIM66                0.020   tripartite motif-containing 66 
PRB1                  0.020   proline-rich protein BstNI subfamily 1 isoform 3 pre...
C16orf59              0.020   hypothetical protein LOC80178 
CPEB3                 0.017   cytoplasmic polyadenylation element binding protein ...
MYO15A                0.017   myosin XV 
LOC100293771          0.017   PREDICTED: hypothetical protein 
LOC100290924          0.017   PREDICTED: hypothetical protein XP_002346979 
LOC100294086          0.017   PREDICTED: hypothetical protein 
HNRNPUL1              0.017   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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