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Search of human proteins with 149944496
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149944496 UBX domain containing 7 [Homo sapiens]
(489 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149944496 UBX domain containing 7 [Homo sapiens] 985 0.0
gi|5901948 FAS-associated factor 1 [Homo sapiens] 57 5e-08
gi|24797106 UBX domain containing 8 [Homo sapiens] 44 3e-04
gi|21361517 UBX domain protein 1 [Homo sapiens] 39 0.008
gi|14195601 protein phosphatase 1, regulatory (inhibitor) subuni... 38 0.024
gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit... 38 0.024
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 36 0.069
gi|75677335 digestive-organ expansion factor homolog [Homo sapiens] 36 0.069
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 36 0.091
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 35 0.12
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens] 35 0.12
gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] 35 0.12
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 35 0.12
gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo s... 35 0.20
gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo s... 35 0.20
gi|82830424 gon-4-like isoform a [Homo sapiens] 35 0.20
gi|17136078 VGF nerve growth factor inducible precursor [Homo sa... 35 0.20
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 34 0.26
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 34 0.26
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 34 0.26
gi|29568099 p47 protein isoform b [Homo sapiens] 34 0.26
gi|20149635 p47 protein isoform a [Homo sapiens] 34 0.26
gi|42734325 wings apart-like homolog [Homo sapiens] 34 0.26
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 33 0.45
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi... 33 0.45
gi|24307965 UBX domain containing 2 [Homo sapiens] 33 0.45
gi|217330641 IWS1 homolog [Homo sapiens] 33 0.45
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens] 33 0.77
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens] 33 0.77
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens] 33 0.77
>gi|149944496 UBX domain containing 7 [Homo sapiens]
Length = 489
Score = 985 bits (2546), Expect = 0.0
Identities = 489/489 (100%), Positives = 489/489 (100%)
Query: 1 MAAHGGSAASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGIAEEPS 60
MAAHGGSAASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGIAEEPS
Sbjct: 1 MAAHGGSAASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGIAEEPS 60
Query: 61 TSSASVSTVRPHTEEEVRAPIPQKQEILVEPEPLFGAPKRRRPARSIFDGFRDFQTETIR 120
TSSASVSTVRPHTEEEVRAPIPQKQEILVEPEPLFGAPKRRRPARSIFDGFRDFQTETIR
Sbjct: 61 TSSASVSTVRPHTEEEVRAPIPQKQEILVEPEPLFGAPKRRRPARSIFDGFRDFQTETIR 120
Query: 121 QEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFAC 180
QEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFAC
Sbjct: 121 QEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFAC 180
Query: 181 QCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLV 240
QCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLV
Sbjct: 181 QCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLV 240
Query: 241 EWHQLDVSSFLDQVTGFLGEHGQLDGLSSSPPKKCARSESLIDASEDSQLEAAIRASLQE 300
EWHQLDVSSFLDQVTGFLGEHGQLDGLSSSPPKKCARSESLIDASEDSQLEAAIRASLQE
Sbjct: 241 EWHQLDVSSFLDQVTGFLGEHGQLDGLSSSPPKKCARSESLIDASEDSQLEAAIRASLQE 300
Query: 301 THFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKE 360
THFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKE
Sbjct: 301 THFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKE 360
Query: 361 ENRRPLTEPPVRTDPGTATNHQGLPAVDSEILEMPPEKADGVVEGIDVNGPKAQLMLRYP 420
ENRRPLTEPPVRTDPGTATNHQGLPAVDSEILEMPPEKADGVVEGIDVNGPKAQLMLRYP
Sbjct: 361 ENRRPLTEPPVRTDPGTATNHQGLPAVDSEILEMPPEKADGVVEGIDVNGPKAQLMLRYP 420
Query: 421 DGKREQITLPEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYDITLQEAGLCPQ 480
DGKREQITLPEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYDITLQEAGLCPQ
Sbjct: 421 DGKREQITLPEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYDITLQEAGLCPQ 480
Query: 481 ETVFVQERN 489
ETVFVQERN
Sbjct: 481 ETVFVQERN 489
>gi|5901948 FAS-associated factor 1 [Homo sapiens]
Length = 650
Score = 56.6 bits (135), Expect = 5e-08
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 17/189 (8%)
Query: 310 QDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHR---------KE 360
Q + + +E L + E F + D ++E E A+ +D +R +E
Sbjct: 468 QGNTTVDELMMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLSLEADRAKRE 527
Query: 361 ENRRPLTEPPVRTDPGTATNHQGLPAVDSEILE-MPPEKADGVVEGIDVNGPKAQLMLRY 419
+ R + E R + + A+ + + +PPE + E P ++L +R
Sbjct: 528 AHEREMAEQ-FRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAE------PVSKLRIRT 580
Query: 420 PDGKREQITLPEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYDITLQEAGLCP 479
P G+ + KL + V SKG+P + ++LL+ FPRR ++ LD + +L E L P
Sbjct: 581 PSGEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTQLDPNKSLLEVKLFP 640
Query: 480 QETVFVQER 488
QET+F++ +
Sbjct: 641 QETLFLEAK 649
>gi|24797106 UBX domain containing 8 [Homo sapiens]
Length = 445
Score = 44.3 bits (103), Expect = 3e-04
Identities = 101/485 (20%), Positives = 186/485 (38%), Gaps = 78/485 (16%)
Query: 19 QFTTITGA-SESVGKHMLEACNNNLEMAVTMFLDGG----GIAEEPSTSSASVSTVRPHT 73
QF +TG S +H LE N N+E AV L+ + P + V+T H
Sbjct: 19 QFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSVFNPPPSRPLQVNTA-DHR 77
Query: 74 EEEVRAPIPQKQEILVEPEPLFGAPKRRRPARSIFDGFRDFQTETIRQEQELRNG---GA 130
PQ + +L L P R +I D FR F IR + R G
Sbjct: 78 IYSYVVSRPQPRGLLGWGYYLIMLPFRFT-YYTILDIFR-FALRFIRPDPRSRVTDPVGD 135
Query: 131 IDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSN 190
I + + + + + ++G++ A + + ++L++ + R+
Sbjct: 136 IVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCA 195
Query: 191 EAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQLDVSSF 250
V ++I +FW + EG R Q + +P+++++ + + V
Sbjct: 196 PEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVV--------- 246
Query: 251 LDQVTGFLGEHGQLDGLSSSPPKKCARSESLIDASEDSQLEAAIRASLQETHFDSTQTKQ 310
G+L+GL P + ++DA++ T+ S + ++
Sbjct: 247 -----------GRLEGLIQ-PDDLINQLTFIMDANQ--------------TYLVSERLER 280
Query: 311 DSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEEN--RRPLTE 368
+ R+ + + E +++ +D+E+E +K ++ RKEE ++ L E
Sbjct: 281 EERNQTQVLRQ--QQDEAYLASLRADQEKE------RKKREERERKRRKEEEVQQQKLAE 332
Query: 369 PPVRTDPGTATNHQGLPAVDSEILE-MPPEKADGVVEGIDVNGPKAQLMLRYPDGKREQI 427
R Q L LE +PPE + E + +++ + P+ R +
Sbjct: 333 ERRR---------QNLQEEKERKLECLPPEPSPDDPESV-------KIIFKLPNDSRVER 376
Query: 428 TLPEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLSHLDYDI-----TLQEAGLCPQET 482
L + + S E+F++ NFPRR L + + TLQEAGL E
Sbjct: 377 RFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCIPSEEWPNPPTLQEAGLSHTEV 436
Query: 483 VFVQE 487
+FVQ+
Sbjct: 437 LFVQD 441
>gi|21361517 UBX domain protein 1 [Homo sapiens]
Length = 312
Score = 39.3 bits (90), Expect = 0.008
Identities = 53/234 (22%), Positives = 87/234 (37%), Gaps = 34/234 (14%)
Query: 260 EHGQLDGLSSSPPK-KCARSESLIDASEDSQLEAAIRASLQETHFDSTQTKQDSRSDEES 318
E G L+G S+ + K A SE LE + + + + + R
Sbjct: 68 EQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQ 127
Query: 319 ESELFSG-----SEEFISVCGSDEEEEVENLA---KSRKSPHKDLGHRKEENRRPLTE-- 368
EL + +E E+ E LA + R+ +D R ++ +
Sbjct: 128 GQELSAARQRLQEDEMRRAAEERRREKAEELAARQRVREKIERDKAERAKKYGGSVGSQP 187
Query: 369 PPVRTDPGTATNHQGLPAVDSEILEMPPEKADGVVEGIDVNGPKAQLMLRYPDGKREQIT 428
PPV +PG V S + PP K + + ++ +R PDG T
Sbjct: 188 PPVAPEPGP---------VPSSPSQEPPTKREY---------DQCRIQVRLPDGTSLTQT 229
Query: 429 LPEQAKLLALVKHVQ-----SKGYPNERFELLTNFPRRKLSHLDYDITLQEAGL 477
+ +L A+ +V+ G + +LL+ FPRR S D + LQE G+
Sbjct: 230 FRAREQLAAVRLYVELHRGEELGGGQDPVQLLSGFPRRAFSEADMERPLQELGM 283
>gi|14195601 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform b [Homo sapiens]
Length = 998
Score = 37.7 bits (86), Expect = 0.024
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 245 LDVSSFLDQVTGFLGEHGQLDGLSSSPPKK-CARSES-----LIDASEDSQLEAAIRASL 298
+D+ + L Q + + G ++ L K+ RSE LI++ +S++++ +
Sbjct: 276 MDIRNKLGQTPFDVADEGLVEHLELLQKKQNVLRSEKETRNKLIESDLNSKIQSGFFKNK 335
Query: 299 QETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHR 358
++ ++ K +E ES S EE G DE E E ++ K P + H
Sbjct: 336 EKMLYEEETPKSQEMEEENKESSSSSSEEEE----GEDEASESETEKEADKKPEAFVNHS 391
Query: 359 KEENRRPLTE 368
E++ +TE
Sbjct: 392 NSESKSSITE 401
>gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform a [Homo sapiens]
Length = 982
Score = 37.7 bits (86), Expect = 0.024
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 245 LDVSSFLDQVTGFLGEHGQLDGLSSSPPKK-CARSES-----LIDASEDSQLEAAIRASL 298
+D+ + L Q + + G ++ L K+ RSE LI++ +S++++ +
Sbjct: 276 MDIRNKLGQTPFDVADEGLVEHLELLQKKQNVLRSEKETRNKLIESDLNSKIQSGFFKNK 335
Query: 299 QETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHR 358
++ ++ K +E ES S EE G DE E E ++ K P + H
Sbjct: 336 EKMLYEEETPKSQEMEEENKESSSSSSEEEE----GEDEASESETEKEADKKPEAFVNHS 391
Query: 359 KEENRRPLTE 368
E++ +TE
Sbjct: 392 NSESKSSITE 401
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 36.2 bits (82), Expect = 0.069
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 245 LDVSSFLDQVTGFLGEHGQLDGLSSSPPKKCARSESLIDASEDSQLEAAIRASLQETHFD 304
L+ L+ V + +LDGL+ KK E E+++ + + +
Sbjct: 1011 LETRKSLEVVLYYKASQRKLDGLAKEEEKKEEMEEEKKQVKEEAKEQCGDELVAEPADPE 1070
Query: 305 STQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRR 364
++ +D +EE + E EE D EEE ++ S +SP ++ R E+++
Sbjct: 1071 EAKSTEDQEENEEDKEE--EEKEE-------DSEEEEDDADSSLESPEENNPLRLSESKK 1121
Query: 365 --PLTEPPVRTDP 375
P PP+ + P
Sbjct: 1122 SSPTPNPPIFSLP 1134
>gi|75677335 digestive-organ expansion factor homolog [Homo sapiens]
Length = 756
Score = 36.2 bits (82), Expect = 0.069
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 11/145 (7%)
Query: 260 EHGQLDGLS--SSPPKKCARSESLIDASEDSQLEAAIRA-----SLQETHFDSTQTKQDS 312
EH D +S + P+ C SES + +S E+ + L T + ++ +++
Sbjct: 30 EHPFYDRVSRKEAKPQICQLSESSDSSDSESDSESEPQQVSGYHRLLATLKNVSEEEEED 89
Query: 313 RSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPP-- 370
+EE E + +E GSD E E A+S +SP E + EPP
Sbjct: 90 EEEEEEEDSIVDDAEMNDEDGGSDVSVEEEMAAESTESPENVALSADPEGKEDGEEPPGT 149
Query: 371 VRTDPG--TATNHQGLPAVDSEILE 393
+T P T H+ L ++++ LE
Sbjct: 150 SQTSPEEFTDAKHESLFSLETNFLE 174
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 35.8 bits (81), Expect = 0.091
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 267 LSSSPPKKCARSESLIDASEDSQLEAAIRASLQETHFDSTQTKQDSRSDEESESELFSGS 326
LSSS ++ S++ SED +L + S+++ T + S +DEE E E S
Sbjct: 1244 LSSSESEESYLSKN----SEDDELAKESKRSVRKR---GRSTDEYSEADEEEEEEEGKPS 1296
Query: 327 EEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDPGTATNHQGLPA 386
+ + +DEEE +N P +D R + + T+ P R + + + +
Sbjct: 1297 RKRLHRIETDEEESCDNAHGDANQPARDSQPRVLPSEQESTKKPYRIESDEEEDFENVGK 1356
Query: 387 VDSEI 391
V S +
Sbjct: 1357 VGSPL 1361
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 35.4 bits (80), Expect = 0.12
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 243 HQLDVSSFLDQVTGFLGEHGQLDGLSSSPPKKCARSESLIDASEDSQLEAAIRASLQET- 301
HQ +S D+V G + ++ ++S P +KC++ E++ AS S A+ + +ET
Sbjct: 1321 HQFVMSRHHDKVPGTISYESEITSVNSFP-EKCSKQENI--ASGISAKSASDNSKAEETQ 1377
Query: 302 -HFDSTQTKQDSRSDEESESELFSGSE---EFISVCGSDEEEEVENLAKSRKSPHKDLGH 357
+ D K+ S SD+ S L S+ E + V + + A +S K LG
Sbjct: 1378 GNVDEASLKESSPSDDSIISPLSEDSQAEAEGVFVSPNKPRTTEDLFAVIHRSKRKVLGR 1437
Query: 358 R-------KEENRRPLT 367
+ + ++R PL+
Sbjct: 1438 KDSGDMSVRSKSRAPLS 1454
>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
Length = 1474
Score = 35.4 bits (80), Expect = 0.12
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 243 HQLDVSSFLDQVTGFLGEHGQLDGLSSSPPKKCARSESLIDASEDSQLEAAIRASLQET- 301
HQ +S D+V G + ++ ++S P +KC++ E++ AS S A+ + +ET
Sbjct: 1165 HQFVMSRHHDKVPGTISYESEITSVNSFP-EKCSKQENI--ASGISAKSASDNSKAEETQ 1221
Query: 302 -HFDSTQTKQDSRSDEESESELFSGSE---EFISVCGSDEEEEVENLAKSRKSPHKDLGH 357
+ D K+ S SD+ S L S+ E + V + + A +S K LG
Sbjct: 1222 GNVDEASLKESSPSDDSIISPLSEDSQAEAEGVFVSPNKPRTTEDLFAVIHRSKRKVLGR 1281
Query: 358 R-------KEENRRPLT 367
+ + ++R PL+
Sbjct: 1282 KDSGDMSVRSKSRAPLS 1298
>gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]
Length = 1226
Score = 35.4 bits (80), Expect = 0.12
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 265 DGLSSSPPKKCARSESLIDASE-DSQLEAAIRASLQETHFD-------STQTKQDSRSDE 316
DG +S P+K + A + D+ L+ A +L E H T+ K+DS S E
Sbjct: 219 DGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQAL-EFHKSRTIPANWKTELKEDSSSSE 277
Query: 317 ESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPV 371
E E E+ S+EEEE+E + R++ + L E+ P+ + PV
Sbjct: 278 AEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPV 332
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 35.4 bits (80), Expect = 0.12
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 265 DGLSSSPPKKCARSESLIDASE-DSQLEAAIRASLQETHFD-------STQTKQDSRSDE 316
DG +S P+K + A + D+ L+ A +L E H T+ K+DS S E
Sbjct: 219 DGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQAL-EFHKSRTIPANWKTELKEDSSSSE 277
Query: 317 ESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPV 371
E E E+ S+EEEE+E + R++ + L E+ P+ + PV
Sbjct: 278 AEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPV 332
>gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo
sapiens]
Length = 732
Score = 34.7 bits (78), Expect = 0.20
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 299 QETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHR 358
+E D + K+D ++E E + E V GSDEEEE ++ K +K K+
Sbjct: 228 KEVSDDEAEEKEDKEEEKEKEEKESEDKPEIEDV-GSDEEEEKKDGDKKKKKKIKEKYID 286
Query: 359 KEENRRPLTEPPVRTDPGTATNHQ 382
+EE + T+P +P TN +
Sbjct: 287 QEELNK--TKPIWTRNPDDITNEE 308
>gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo
sapiens]
Length = 854
Score = 34.7 bits (78), Expect = 0.20
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 299 QETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHR 358
+E D + K+D ++E E + E V GSDEEEE ++ K +K K+
Sbjct: 350 KEVSDDEAEEKEDKEEEKEKEEKESEDKPEIEDV-GSDEEEEKKDGDKKKKKKIKEKYID 408
Query: 359 KEENRRPLTEPPVRTDPGTATNHQ 382
+EE + T+P +P TN +
Sbjct: 409 QEELNK--TKPIWTRNPDDITNEE 430
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 34.7 bits (78), Expect = 0.20
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 279 ESLIDASEDSQLEAAIRASLQETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEE 338
+ + ASE+S L LQET T + R +E ESE + EE S+ E
Sbjct: 1474 DEMSSASEESVLSVP---ELQETMEKLTWLASERRMSQEGESEEENSQEE-----NSEPE 1525
Query: 339 EEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDPGTA 378
EE E A+ +S K+ E +PP P TA
Sbjct: 1526 EEEEEEAEGMESLQKEDEMTDEAVGDSAEKPPTFASPETA 1565
>gi|17136078 VGF nerve growth factor inducible precursor [Homo
sapiens]
Length = 615
Score = 34.7 bits (78), Expect = 0.20
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 22/145 (15%)
Query: 276 ARSESLIDASEDSQLEAAIRASLQETHF------DSTQTKQDSRSDEESESELFSGSEEF 329
A+ E L D + D L+ ++ ++ ++ + ++ +R +EE+E E G E
Sbjct: 319 AQEERLADLASDLLLQYLLQGGARQRGLGGRGLQEAAEERESAREEEEAEQERRGGEER- 377
Query: 330 ISVCGSDEEEEVENLAKSRKS----------PHKDLGHRKEENRRPLTEPPVRTDPGTAT 379
G ++EE E A++ ++ ++ G E++R E P
Sbjct: 378 ---VGEEDEEAAEAEAEAEEAERARQNALLFAEEEDGEAGAEDKRSQEETPGHRRKEAEG 434
Query: 380 NHQGLPAVDSEILEMPPEKADGVVE 404
+G D E EM P+ D ++E
Sbjct: 435 TEEGGEEEDDE--EMDPQTIDSLIE 457
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 34.3 bits (77), Expect = 0.26
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 8/127 (6%)
Query: 277 RSESLIDASEDSQLEAAI-RASLQETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGS 335
+SE I E S+ E I +ET T+++ + +E E + G EE + G
Sbjct: 439 KSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGE 498
Query: 336 DE-----EEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDPGTATNHQGLPAVDSE 390
+E EE + K KSP K+ E + P E P + + + E
Sbjct: 499 EETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSP--EKEEAKSPAEVKSPEKAKSPAKE 556
Query: 391 ILEMPPE 397
+ PPE
Sbjct: 557 EAKSPPE 563
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 34.3 bits (77), Expect = 0.26
Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 11/171 (6%)
Query: 282 IDASEDSQ---LEAAIRASLQETHFDSTQTKQDSR----SDEESESELFSGSEEFISVCG 334
+ SED Q +A +A L+E Q K+ R D SE++ S EE
Sbjct: 1355 VSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEE 1414
Query: 335 SDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDPGTATNHQGLPAVDSEILEM 394
+EEEE E + K G +++ R+ L + +RT+ A + E
Sbjct: 1415 EEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAERER 1474
Query: 395 PPEKADGVVEGIDVNGPK----AQLMLRYPDGKREQITLPEQAKLLALVKH 441
EK V+E D + K +L+L + +E + + ++ L H
Sbjct: 1475 EREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPH 1525
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 34.3 bits (77), Expect = 0.26
Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 11/171 (6%)
Query: 282 IDASEDSQ---LEAAIRASLQETHFDSTQTKQDSR----SDEESESELFSGSEEFISVCG 334
+ SED Q +A +A L+E Q K+ R D SE++ S EE
Sbjct: 1393 VSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEE 1452
Query: 335 SDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDPGTATNHQGLPAVDSEILEM 394
+EEEE E + K G +++ R+ L + +RT+ A + E
Sbjct: 1453 EEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAERER 1512
Query: 395 PPEKADGVVEGIDVNGPK----AQLMLRYPDGKREQITLPEQAKLLALVKH 441
EK V+E D + K +L+L + +E + + ++ L H
Sbjct: 1513 EREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPH 1563
>gi|29568099 p47 protein isoform b [Homo sapiens]
Length = 339
Score = 34.3 bits (77), Expect = 0.26
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 17 IQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGIAEEPSTSSASVSTV 69
+++F +TGA E + LE+ +L++A+ F + GG + + S A+ S+V
Sbjct: 9 LREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSSV 61
>gi|20149635 p47 protein isoform a [Homo sapiens]
Length = 370
Score = 34.3 bits (77), Expect = 0.26
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 17 IQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGIAEEPSTSSASVSTV 69
+++F +TGA E + LE+ +L++A+ F + GG + + S A+ S+V
Sbjct: 9 LREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSSV 61
>gi|42734325 wings apart-like homolog [Homo sapiens]
Length = 1190
Score = 34.3 bits (77), Expect = 0.26
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Query: 278 SESLIDASEDSQLEAAIRASLQETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDE 337
SES D +D Q+E +T + +D +S+ + + E + D
Sbjct: 459 SESEDDEDDDCQVERKTSKKRTKTAPSPSLQPPPESNDNSQDSQSGTNNAENL-----DF 513
Query: 338 EEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDPGTATNHQGLPAVDSEILEMPP 396
E++ + +S K P G + +EN R + P R+ N + DSE L PP
Sbjct: 514 TEDLPGVPESVKKPINKQGDKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSEELPGPP 572
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 33.5 bits (75), Expect = 0.45
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 11/134 (8%)
Query: 316 EESESELFSGSEEFISVCGSD----EEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPV 371
EE E G+E + G EE++++L P G + E ++PP
Sbjct: 579 EEGEERRRLGAEPTVRPRGRSMQALAEEDLQHLPPQPLPPQLSQGDGRSET----SQPPT 634
Query: 372 RTDPGTATNHQG-LPAVDSEILEMPPEKADGVVEGIDVNG-PKA-QLMLRYPDGKREQIT 428
P + H G P P + V +VNG P+A L L Y D KR+
Sbjct: 635 PGSPSHSPLHSGPRPRRRESDPTGPQRQVFSVAPPFEVNGLPRAVPLSLPYQDFKRDLSD 694
Query: 429 LPEQAKLLALVKHV 442
E+A+LL V+ V
Sbjct: 695 YRERARLLNRVRRV 708
>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 33.5 bits (75), Expect = 0.45
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 20/145 (13%)
Query: 283 DASEDSQLEAAIRASLQETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEV- 341
+ + +S +E+ +S T + +++ E ESE + SEE S EE E
Sbjct: 1594 EEATESTVESEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEESSTPESEESEST 1653
Query: 342 --------ENLAKSRKSPH----KDLGHRKEENRRPLTEPPVRTDPGTATNHQGLPAV-- 387
+N+ +R+ P K++ RKEE + EP + + + G V
Sbjct: 1654 ESEGEKARKNIVLARRRPMVEEVKEVKGRKEEPQEEQKEPKMEEEEHSEEEESGPAPVEE 1713
Query: 388 --DSEILEMPPEKADGVVEGIDVNG 410
D E ++P E G E V G
Sbjct: 1714 STDPEAQDIPEE---GSAESASVEG 1735
Score = 29.3 bits (64), Expect = 8.5
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 12/115 (10%)
Query: 324 SGSEEFISVCGSDEE--EEVENLAKSRKSPHKDLGHRKEENRRPLT-EPPVRTDPGTATN 380
+G EE+ V G EE EE E K K P ++ EE +T E P +P T
Sbjct: 1486 AGQEEYGEVVGEAEEEYEEEEEEPKKIKKPKVEIREPSEEEEVVVTIEKPPAAEPTYTTW 1545
Query: 381 HQGLPAVDSEILEMPPEKADGVVEG---IDVNGPKAQLMLRYPDGKREQITLPEQ 432
+ + I M +K G+ + +D+ G + Q L D ++TL ++
Sbjct: 1546 KR------ARIFPMIFKKVRGLADKRGIVDLEGEEWQRRLEEEDKDYLKLTLDQE 1594
>gi|24307965 UBX domain containing 2 [Homo sapiens]
Length = 508
Score = 33.5 bits (75), Expect = 0.45
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 413 AQLMLRYPDGKREQITLPEQAKLLALVKHV-QSKGYPNERFELLTNFPRRKLSHLDYDIT 471
A++ R PDG P A L + Q+ G F L T FPRR+ + DY
Sbjct: 320 ARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKK 379
Query: 472 LQEAGLCPQETV 483
L + L P +V
Sbjct: 380 LLDLELAPSASV 391
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 33.5 bits (75), Expect = 0.45
Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 17/145 (11%)
Query: 255 TGFLGEHGQLDGLSSSPPKKCARSESLIDASEDSQLEAAIRASLQETHFDSTQTKQDSRS 314
TG + H + + +S + + D+ D L + AS E+ Q DS S
Sbjct: 42 TGSVERHSENE--TSDREDGLPKGHHVTDSENDEPLN--LNASDSESEELHRQKDSDSES 97
Query: 315 DEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTD 374
+E +E E ++ GSD E E ++RK P D EN L ++
Sbjct: 98 EERAEPPASDSENEDVNQHGSDSESE-----ETRKLPGSD-----SENEELLNGHASDSE 147
Query: 375 PGTATNHQGLPAVDSEILEMPPEKA 399
H PA DSEI E+ A
Sbjct: 148 NEDVGKH---PASDSEIEELQKSPA 169
>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
Length = 1083
Score = 32.7 bits (73), Expect = 0.77
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 310 QDSRSDEESESELFSGSEEFI------SVCGSDEEEEVENLAKSRKSPHKDLGHRKEENR 363
+DS EE +SE S EE S GS++EEE E+ + + D +E++
Sbjct: 5 EDSNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
Query: 364 RPLTEP 369
RP +P
Sbjct: 65 RPPKKP 70
>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 32.7 bits (73), Expect = 0.77
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 310 QDSRSDEESESELFSGSEEFI------SVCGSDEEEEVENLAKSRKSPHKDLGHRKEENR 363
+DS EE +SE S EE S GS++EEE E+ + + D +E++
Sbjct: 5 EDSNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
Query: 364 RPLTEP 369
RP +P
Sbjct: 65 RPPKKP 70
>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 32.7 bits (73), Expect = 0.77
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 310 QDSRSDEESESELFSGSEEFI------SVCGSDEEEEVENLAKSRKSPHKDLGHRKEENR 363
+DS EE +SE S EE S GS++EEE E+ + + D +E++
Sbjct: 5 EDSNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDD 64
Query: 364 RPLTEP 369
RP +P
Sbjct: 65 RPPKKP 70
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,885,978
Number of Sequences: 37866
Number of extensions: 965416
Number of successful extensions: 3436
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 3120
Number of HSP's gapped (non-prelim): 348
length of query: 489
length of database: 18,247,518
effective HSP length: 106
effective length of query: 383
effective length of database: 14,233,722
effective search space: 5451515526
effective search space used: 5451515526
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.