NSFL1C 11903

Name: NSFL1C	Sequence: fasta or formatted (370aa)		NCBI GI: 20149635
Description: p47 protein isoform a		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [339aa] p47 protein isoform b alt prot [259aa] p47 protein isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.3 38 2 C cysteine 0.0 0 0 D aspartate 6.5 24 2 E glutamate 10.0 37 5 F phenylalanine 4.6 17 2 G glycine 7.8 29 3 H histidine 2.2 8 1 I isoleucine 4.1 15 1 K lysine 4.6 17 2 L leucine 7.6 28 2 M methionine 1.1 4 1 N asparagine 3.0 11 1 P proline 4.6 17 2 Q glutamine 5.4 20 2 R arginine 7.0 26 2 S serine 8.9 33 3 T threonine 4.6 17 2 V valine 5.9 22 2 W tryptophan 0.5 2 1 Y tyrosine 1.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 p47 protein isoform a NSFL1C 0.887 p47 protein isoform b NSFL1C 0.655 p47 protein isoform c UBXN2B 0.408 UBX domain protein 2B UBXN2A 0.174 UBX domain containing 4 UBXN11 0.024 socius isoform 3 UBXN11 0.024 socius isoform 1 UBXN11 0.024 socius isoform 2 ASPSCR1 0.023 alveolar soft part sarcoma chromosome region, candid... EIF4G1 0.021 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.021 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.021 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.021 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.021 eukaryotic translation initiation factor 4 gamma, 1 ... OTUD7B 0.014 zinc finger protein Cezanne DSCAM 0.014 Down syndrome cell adhesion molecule isoform CHD2-42... UBXN7 0.013 UBX domain containing 7 OTUD7A 0.013 OTU domain containing 7A MLLT4 0.011 myeloid/lymphoid or mixed-lineage leukemia (trithora... MLLT4 0.011 myeloid/lymphoid or mixed-lineage leukemia (trithora... MLLT4 0.011 myeloid/lymphoid or mixed-lineage leukemia (trithora... PITPNM2 0.011 phosphatidylinositol transfer protein, membrane-asso... FAM170A 0.011 family with sequence similarity 170, member A [Homo... ZNF513 0.011 zinc finger protein 513 FAM100A 0.011 hypothetical protein LOC124402 RPGR 0.011 retinitis pigmentosa GTPase regulator isoform C [Hom... FAM100B 0.011 hypothetical protein LOC283991 SLC4A3 0.011 solute carrier family 4, anion exchanger, member 3 ... EGFR 0.010 epidermal growth factor receptor isoform a precursor... OGFR 0.010 opioid growth factor receptor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.