HSP90AA1 5506

Name: HSP90AA1	Sequence: fasta or formatted (732aa)		NCBI GI: 154146191
Description: heat shock 90kDa protein 1, alpha isoform 2		Referenced in: Heat-Shock Proteins and Chaperonins
Other entries for this name: alt prot [854aa] heat shock 90kDa protein 1, alpha isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 34 2 C cysteine 1.0 7 2 D aspartate 7.4 54 3 E glutamate 13.3 97 4 F phenylalanine 3.4 25 1 G glycine 4.4 32 2 H histidine 1.6 12 1 I isoleucine 6.8 50 2 K lysine 10.9 80 6 L leucine 8.5 62 2 M methionine 2.7 20 1 N asparagine 4.2 31 2 P proline 2.9 21 2 Q glutamine 3.4 25 2 R arginine 4.1 30 2 S serine 5.7 42 2 T threonine 5.9 43 1 V valine 5.2 38 3 W tryptophan 0.5 4 1 Y tyrosine 3.4 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 heat shock 90kDa protein 1, alpha isoform 2 HSP90AA1 1.000 heat shock 90kDa protein 1, alpha isoform 1 HSP90AB1 0.868 heat shock 90kDa protein 1, beta HSP90B1 0.431 heat shock protein 90kDa beta, member 1 TRAP1 0.120 TNF receptor-associated protein 1 WDR87 0.028 NYD-SP11 protein KIAA1529 0.024 hypothetical protein LOC57653 LOC100294088 0.022 PREDICTED: hypothetical protein, partial RNF20 0.022 ring finger protein 20 LOC728792 0.021 PREDICTED: hypothetical protein MYT1L 0.021 myelin transcription factor 1-like MYT1 0.019 myelin transcription factor 1 EIF3A 0.019 eukaryotic translation initiation factor 3, subunit 1... RGAG4 0.018 retrotransposon gag domain containing 4 LOC100133599 0.018 PREDICTED: hypothetical protein RPGR 0.018 retinitis pigmentosa GTPase regulator isoform C [Hom... CALR 0.017 calreticulin precursor TTBK1 0.017 tau tubulin kinase 1 SFRS11 0.016 splicing factor, arginine/serine-rich 11 FAM50A 0.016 XAP-5 protein DAXX 0.015 death-domain associated protein isoform a DAXX 0.015 death-domain associated protein isoform a DAXX 0.015 death-domain associated protein isoform b NEFH 0.015 neurofilament, heavy polypeptide 200kDa RANGAP1 0.015 Ran GTPase activating protein 1 EHMT2 0.015 euchromatic histone-lysine N-methyltransferase 2 is... PELP1 0.015 proline, glutamic acid and leucine rich protein 1 [... ATRX 0.015 transcriptional regulator ATRX isoform 2 ATRX 0.015 transcriptional regulator ATRX isoform 1 ZRSR2 0.015 U2 small nuclear RNA auxiliary factor 1-like 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.