Guide to the Human Genome
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Name: C1orf107 Sequence: fasta or formatted (756aa) NCBI GI: 75677335
Description:

digestive-organ expansion factor homolog

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         37           2
 C cysteine            0.8          6           1
 D aspartate           5.6         42           4
 E glutamate           9.4         71           7
 F phenylalanine       5.8         44           2
 G glycine             4.8         36           2
 H histidine           3.0         23           1
 I isoleucine          4.9         37           2
 K lysine              6.5         49           3
 L leucine             9.8         74           2
 M methionine          1.9         14           1
 N asparagine          4.9         37           2
 P proline             4.4         33           2
 Q glutamine           5.2         39           2
 R arginine            5.6         42           3
 S serine              8.7         66           3
 T threonine           4.2         32           2
 V valine              5.7         43           2
 W tryptophan          0.8          6           1
 Y tyrosine            3.3         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   digestive-organ expansion factor homolog 
NCL                   0.020   nucleolin 
EIF5B                 0.020   eukaryotic translation initiation factor 5B 
ACIN1                 0.020   apoptotic chromatin condensation inducer 1 
AP3B1                 0.019   adaptor-related protein complex 3, beta 1 subunit [H...
TRIM44                0.019   DIPB protein 
SETD1B                0.019   SET domain containing 1B 
POTEH                 0.018   ANKRD26-like family C, member 3 
POTEG                 0.018   POTE ankyrin domain family, member G 
P704P                 0.018   prostate-specific P704P 
CDC2L2                0.018   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.018   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
ACTBL3                0.017   PREDICTED: actin, beta-like 3 
ACTBL3                0.017   PREDICTED: actin, beta-like 3 
ACTBL3                0.017   PREDICTED: kappa-actin 
TMX4                  0.017   thioredoxin-related transmembrane protein 4 
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MYST4                 0.017   MYST histone acetyltransferase (monocytic leukemia)...
WDR87                 0.016   NYD-SP11 protein 
ACRC                  0.016   ACRC protein 
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
AP3B2                 0.015   adaptor-related protein complex 3, beta 2 subunit [H...
MYT1                  0.015   myelin transcription factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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