Guide to the Human Genome
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Name: OGN Sequence: fasta or formatted (298aa) NCBI GI: 14916498
Description:

osteoglycin preproprotein

Referenced in:

Bone and Related Tissues
Leucine-rich Repeat Family

Other entries for this name:
alt mRNA [298aa] osteoglycin preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         14           1
 C cysteine            2.0          6           1
 D aspartate           6.7         20           2
 E glutamate           7.4         22           2
 F phenylalanine       4.4         13           1
 G glycine             3.0          9           1
 H histidine           1.0          3           1
 I isoleucine          8.1         24           2
 K lysine              9.1         27           2
 L leucine            15.1         45           6
 M methionine          0.7          2           1
 N asparagine          6.7         20           2
 P proline             7.0         21           2
 Q glutamine           2.7          8           2
 R arginine            3.4         10           2
 S serine              6.0         18           1
 T threonine           5.0         15           1
 V valine              3.4         10           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   osteoglycin preproprotein 
OGN                   1.000   osteoglycin preproprotein 
EPYC                  0.360   dermatan sulfate proteoglycan 3 precursor 
OPTC                  0.325   opticin precursor 
LUM                   0.108   lumican precursor 
OMD                   0.098   osteomodulin 
DCN                   0.096   decorin isoform a preproprotein 
DCN                   0.096   decorin isoform a preproprotein 
SLIT3                 0.093   slit homolog 3 
PRELP                 0.086   proline arginine-rich end leucine-rich repeat protei...
PRELP                 0.086   proline arginine-rich end leucine-rich repeat protein...
ASPN                  0.084   asporin 
PODNL1                0.082   podocan-like 1 isoform 3 
KERA                  0.082   keratocan 
PODN                  0.080   podocan 
LRRTM1                0.079   leucine rich repeat transmembrane neuronal 1 
FMOD                  0.079   fibromodulin precursor 
LRRTM4                0.073   leucine rich repeat transmembrane neuronal 4 isofor...
LRRTM4                0.073   leucine rich repeat transmembrane neuronal 4 isofor...
SLIT1                 0.070   slit homolog 1 
CHAD                  0.068   chondroadherin precursor 
SLIT2                 0.065   slit homolog 2 
KIAA0644              0.063   hypothetical protein LOC9865 
LRRTM3                0.061   leucine rich repeat transmembrane neuronal 3 
PODNL1                0.061   podocan-like 1 isoform 2 
PODNL1                0.061   podocan-like 1 isoform 1 
SLITRK3               0.061   slit and trk like 3 protein 
BGN                   0.059   biglycan preproprotein 
PXDNL                 0.059   peroxidasin homolog-like 
SLITRK4               0.059   slit and trk like 4 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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