LRRTM1 36611

Name: LRRTM1	Sequence: fasta or formatted (522aa)		NCBI GI: 86990456
Description: leucine rich repeat transmembrane neuronal 1		Referenced in: Leucine-rich Repeat Family Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 38 2 C cysteine 3.6 19 1 D aspartate 3.8 20 1 E glutamate 5.0 26 1 F phenylalanine 4.0 21 1 G glycine 5.9 31 2 H histidine 3.6 19 1 I isoleucine 3.3 17 2 K lysine 3.3 17 1 L leucine 15.3 80 3 M methionine 2.1 11 1 N asparagine 5.2 27 2 P proline 4.4 23 2 Q glutamine 5.6 29 2 R arginine 5.4 28 2 S serine 6.9 36 2 T threonine 4.8 25 2 V valine 5.9 31 2 W tryptophan 1.5 8 1 Y tyrosine 3.1 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine rich repeat transmembrane neuronal 1 LRRTM2 0.442 leucine rich repeat transmembrane neuronal 2 LRRTM3 0.436 leucine rich repeat transmembrane neuronal 3 LRRTM4 0.433 leucine rich repeat transmembrane neuronal 4 isofor... LRRTM4 0.432 leucine rich repeat transmembrane neuronal 4 isofor... CHADL 0.105 chondroadherin-like CPN2 0.100 carboxypeptidase N, polypeptide 2, 83kD KIAA0644 0.096 hypothetical protein LOC9865 LRIG2 0.092 leucine-rich repeats and immunoglobulin-like domains ... LRRC70 0.091 synleurin CHAD 0.090 chondroadherin precursor LRIG3 0.090 leucine-rich repeats and immunoglobulin-like domains... LRIG3 0.090 leucine-rich repeats and immunoglobulin-like domain... LRIG1 0.082 leucine-rich repeats and immunoglobulin-like domains... LRRC15 0.082 leucine rich repeat containing 15 isoform a LRRC15 0.082 leucine rich repeat containing 15 isoform b LGR6 0.082 leucine-rich repeat-containing G protein-coupled rec... LGR5 0.080 leucine-rich repeat-containing G protein-coupled rece... LRRN3 0.080 leucine rich repeat neuronal 3 LRRN3 0.080 leucine rich repeat neuronal 3 LRRN3 0.080 leucine rich repeat neuronal 3 IGFALS 0.079 insulin-like growth factor binding protein, acid la... IGFALS 0.079 insulin-like growth factor binding protein, acid labi... LGR4 0.079 leucine-rich repeat-containing G protein-coupled re... NYX 0.076 nyctalopin precursor GP5 0.075 glycoprotein V (platelet) RXFP1 0.074 relaxin/insulin-like family peptide receptor 1 [Homo... FLRT3 0.073 fibronectin leucine rich transmembrane protein 3 pre... FLRT3 0.073 fibronectin leucine rich transmembrane protein 3 prec... LRRN2 0.072 leucine rich repeat neuronal 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.