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Search of human proteins with 148762950
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148762950 BEN domain containing 4 isoform a [Homo sapiens]
(534 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148762950 BEN domain containing 4 isoform a [Homo sapiens] 1089 0.0
gi|228008410 BEN domain containing 4 isoform b [Homo sapiens] 890 0.0
gi|21389533 BTB (POZ) domain containing 14A [Homo sapiens] 50 7e-06
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 50 7e-06
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 49 1e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 49 2e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 48 2e-05
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 48 3e-05
gi|118572603 ubinuclein 1 [Homo sapiens] 47 3e-05
gi|118572601 ubinuclein 1 [Homo sapiens] 47 3e-05
gi|150170670 piccolo isoform 2 [Homo sapiens] 47 3e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 47 3e-05
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 47 4e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens] 46 7e-05
gi|21536355 TBP-associated factor 6 isoform gamma [Homo sapiens] 46 7e-05
gi|21536357 TBP-associated factor 6 isoform delta [Homo sapiens] 46 1e-04
gi|5032147 TBP-associated factor 6 isoform alpha [Homo sapiens] 46 1e-04
gi|21536359 TBP-associated factor 6 isoform alpha [Homo sapiens] 46 1e-04
gi|119395716 forkhead box C1 [Homo sapiens] 46 1e-04
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 46 1e-04
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 45 1e-04
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 45 1e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 1e-04
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 45 1e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 45 1e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 45 1e-04
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 45 1e-04
gi|112421108 capicua homolog [Homo sapiens] 45 1e-04
gi|13699803 WAS protein family, member 3 [Homo sapiens] 45 2e-04
gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo ... 45 2e-04
>gi|148762950 BEN domain containing 4 isoform a [Homo sapiens]
Length = 534
Score = 1089 bits (2817), Expect = 0.0
Identities = 534/534 (100%), Positives = 534/534 (100%)
Query: 1 MEEEMQPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPP 60
MEEEMQPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPP
Sbjct: 1 MEEEMQPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPP 60
Query: 61 PFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPP 120
PFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPP
Sbjct: 61 PFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPP 120
Query: 121 PASPAASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLS 180
PASPAASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLS
Sbjct: 121 PASPAASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLS 180
Query: 181 LLNCGGKLLDSNHSQSMISCVKQEGSSYNERQEHCHIGKGVHSQTSDNVDIEMQYMQRKQ 240
LLNCGGKLLDSNHSQSMISCVKQEGSSYNERQEHCHIGKGVHSQTSDNVDIEMQYMQRKQ
Sbjct: 181 LLNCGGKLLDSNHSQSMISCVKQEGSSYNERQEHCHIGKGVHSQTSDNVDIEMQYMQRKQ 240
Query: 241 QTSAFLRVFTDSLQNYLLSGSFPTPNPSSASEYGHLADVDPLSTSPVHTLGGWTSPATSE 300
QTSAFLRVFTDSLQNYLLSGSFPTPNPSSASEYGHLADVDPLSTSPVHTLGGWTSPATSE
Sbjct: 241 QTSAFLRVFTDSLQNYLLSGSFPTPNPSSASEYGHLADVDPLSTSPVHTLGGWTSPATSE 300
Query: 301 SHGHPSSSTLPEEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLESIPVPCQTVLDY 360
SHGHPSSSTLPEEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLESIPVPCQTVLDY
Sbjct: 301 SHGHPSSSTLPEEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLESIPVPCQTVLDY 360
Query: 361 LKMVLQHHNQLLIPQPADQPTEGSKQLLNNYPVYITSKQWDEAVNSSKKDGRRLLRYLIR 420
LKMVLQHHNQLLIPQPADQPTEGSKQLLNNYPVYITSKQWDEAVNSSKKDGRRLLRYLIR
Sbjct: 361 LKMVLQHHNQLLIPQPADQPTEGSKQLLNNYPVYITSKQWDEAVNSSKKDGRRLLRYLIR 420
Query: 421 FVFTTDELKYSCGLGKRKRSVQSGETGPERRPLDPVKVTCLREFIRMHCTSNPDWWMPSE 480
FVFTTDELKYSCGLGKRKRSVQSGETGPERRPLDPVKVTCLREFIRMHCTSNPDWWMPSE
Sbjct: 421 FVFTTDELKYSCGLGKRKRSVQSGETGPERRPLDPVKVTCLREFIRMHCTSNPDWWMPSE 480
Query: 481 EQINKVFSDAVGHARQGRAVGTFLHNGGSFYEGIDHQASQDEVFNKSSQDGSGD 534
EQINKVFSDAVGHARQGRAVGTFLHNGGSFYEGIDHQASQDEVFNKSSQDGSGD
Sbjct: 481 EQINKVFSDAVGHARQGRAVGTFLHNGGSFYEGIDHQASQDEVFNKSSQDGSGD 534
>gi|228008410 BEN domain containing 4 isoform b [Homo sapiens]
Length = 441
Score = 890 bits (2299), Expect = 0.0
Identities = 439/439 (100%), Positives = 439/439 (100%)
Query: 1 MEEEMQPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPP 60
MEEEMQPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPP
Sbjct: 1 MEEEMQPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPP 60
Query: 61 PFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPP 120
PFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPP
Sbjct: 61 PFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPP 120
Query: 121 PASPAASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLS 180
PASPAASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLS
Sbjct: 121 PASPAASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLS 180
Query: 181 LLNCGGKLLDSNHSQSMISCVKQEGSSYNERQEHCHIGKGVHSQTSDNVDIEMQYMQRKQ 240
LLNCGGKLLDSNHSQSMISCVKQEGSSYNERQEHCHIGKGVHSQTSDNVDIEMQYMQRKQ
Sbjct: 181 LLNCGGKLLDSNHSQSMISCVKQEGSSYNERQEHCHIGKGVHSQTSDNVDIEMQYMQRKQ 240
Query: 241 QTSAFLRVFTDSLQNYLLSGSFPTPNPSSASEYGHLADVDPLSTSPVHTLGGWTSPATSE 300
QTSAFLRVFTDSLQNYLLSGSFPTPNPSSASEYGHLADVDPLSTSPVHTLGGWTSPATSE
Sbjct: 241 QTSAFLRVFTDSLQNYLLSGSFPTPNPSSASEYGHLADVDPLSTSPVHTLGGWTSPATSE 300
Query: 301 SHGHPSSSTLPEEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLESIPVPCQTVLDY 360
SHGHPSSSTLPEEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLESIPVPCQTVLDY
Sbjct: 301 SHGHPSSSTLPEEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLESIPVPCQTVLDY 360
Query: 361 LKMVLQHHNQLLIPQPADQPTEGSKQLLNNYPVYITSKQWDEAVNSSKKDGRRLLRYLIR 420
LKMVLQHHNQLLIPQPADQPTEGSKQLLNNYPVYITSKQWDEAVNSSKKDGRRLLRYLIR
Sbjct: 361 LKMVLQHHNQLLIPQPADQPTEGSKQLLNNYPVYITSKQWDEAVNSSKKDGRRLLRYLIR 420
Query: 421 FVFTTDELKYSCGLGKRKR 439
FVFTTDELKYSCGLGKRKR
Sbjct: 421 FVFTTDELKYSCGLGKRKR 439
>gi|21389533 BTB (POZ) domain containing 14A [Homo sapiens]
Length = 587
Score = 49.7 bits (117), Expect = 7e-06
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 26/252 (10%)
Query: 259 SGSFPTPNPSSASEYG--HLADVDPLSTSPVHTLGGWTSPATSESHGHPSSSTLPEEEEE 316
+G+ P P S YG LA + P + G TSP S S ++ EE+E
Sbjct: 211 AGTAPLKLPR-VSYYGVPSLATLIPGIQQMPYPQGERTSPGASSLPTTDSPTSYHNEEDE 269
Query: 317 EDEEGYCPRCQELEQEVISLQQENEELRRKLESIPVPCQTVL----DYLKMVLQHHNQL- 371
ED+E Y +E ++ + ++ K E +P+ ++ + D + + +Q+
Sbjct: 270 EDDEAYDTMVEEQYGQMYIKASGSYAVQEKPEPVPLESRSCVLIRRDLVALPASLISQIG 329
Query: 372 --LIPQPADQPTEGSK-QLLNNYPVYITSKQWDEAVNSSKKDGRRLLRYLIRFVFTTDEL 428
P+ + G K +L+ VYIT Q + + LLR L+ F + L
Sbjct: 330 YRCHPKLYSEGDPGEKLELVAGSGVYITRGQLMNCHLCAGVKHKVLLRRLLATFFDRNTL 389
Query: 429 KYSCGLGKRKRSVQSGETGPERRPLDPVKVTCLREFIRMHCTSNPDWWMPS--EEQINKV 486
SCG G ++S + P R+PLD + + ++++C + + PS E ++N +
Sbjct: 390 ANSCGTG-----IRSSTSDPSRKPLD----SRVLNAVKLYCQN----FAPSFKESEMNVI 436
Query: 487 FSDAVGHARQGR 498
+D +AR+ R
Sbjct: 437 AADMCTNARRVR 448
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 49.7 bits (117), Expect = 7e-06
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 41 YERPTLVELPHVRAPPPPPP------PFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAA 94
Y V+ P A PP PP P A AA + PPP ++ P RAA
Sbjct: 93 YRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAA 152
Query: 95 AAASSSSPSCTPATS--QGHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAA 146
AAA+++ PS PA + P PP +PAA + + A R P A AA
Sbjct: 153 AAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAA 206
Score = 46.6 bits (109), Expect = 6e-05
Identities = 42/157 (26%), Positives = 54/157 (34%), Gaps = 41/157 (26%)
Query: 50 PHVRAPPPPPPPFA-------PHAAVSISSSEPPP---------QQFQAQSSYPPGPGRA 93
P APPPPP P A P AA + +++ P P Q+ ++ PP P
Sbjct: 128 PPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAP 187
Query: 94 AAAASSSSPSCTPATSQGHLRTPAQPPPASPA-------------------------ASS 128
A A + P P + P PPP PA A+
Sbjct: 188 PAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAAR 247
Query: 129 SSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESR 165
S VVRY G+ A G G LE A +R
Sbjct: 248 PVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAAR 284
Score = 40.4 bits (93), Expect = 0.004
Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 7 PAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHA 66
PA+ GP + +P P+ P R P V PPPP PP P
Sbjct: 164 PAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPP-- 221
Query: 67 AVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSP 102
+PPP Q Q PP G A A ++ P
Sbjct: 222 ----QQQQPPPPQPQ-----PPPEGGAVRAGGAARP 248
Score = 37.7 bits (86), Expect = 0.026
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 69 SISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASS 128
SIS Q + + PP P RA A +++ + P TPA PPP +P A++
Sbjct: 90 SISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPP------TPAPPPPPAPVAAA 143
Query: 129 SSSFAAVVRYGPGAAAAAGT 148
+ + A P AAAAA T
Sbjct: 144 APARA------PRAAAAAAT 157
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 48.9 bits (115), Expect = 1e-05
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 12 PSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSIS 71
PS P Y P + + P+ ++ E P L PPPPPP AP
Sbjct: 731 PSPPPSYHPPPPPTKKPEVVVEAPSASETAEEP----LQDPNWPPPPPP--APEEQDLSM 784
Query: 72 SSEPPPQQ--FQAQSSYPPGPGRA-----AAAASSSSPSCTPATSQGHLRTPAQPPPASP 124
+ PPP++ F S P GP + + AASSSS + G P PP +P
Sbjct: 785 ADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAP 844
Query: 125 AASSSSSFAAVVRYGPGAAAAAG 147
A+S+ A + + P + G
Sbjct: 845 ASSAPGHVAKLPQKEPVGCSKGG 867
Score = 48.1 bits (113), Expect = 2e-05
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 5 MQPAEEGPSVPKIYKQRSPYSVLKTF-----PSKRPALAKRYERPTLVELPH--VRAP-- 55
+ P +E P + K Q P S ++ P+K+P + E P+ E ++ P
Sbjct: 714 LTPLQESPVISK--DQSPPPSPPPSYHPPPPPTKKPEVV--VEAPSASETAEEPLQDPNW 769
Query: 56 PPPPPPFAPHAAVSISSSEPPPQQ--FQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHL 113
PPPPPP AP + PPP++ F S P GP + SS + S + AT+ +
Sbjct: 770 PPPPPP-APEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATAL-QI 827
Query: 114 RTPA--QPPPASPAASSSSS 131
+ P PPPA PA + +SS
Sbjct: 828 QPPGSPDPPPAPPAPAPASS 847
Score = 35.4 bits (80), Expect = 0.13
Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 7/118 (5%)
Query: 14 VPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELP------HVRAPPPPPPPFAPHAA 67
+P K +P+S + P A P +V P ++PP P P
Sbjct: 660 IPPHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQE 719
Query: 68 VSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPA 125
+ S + P S +PP P +PS + T++ L+ P PPP PA
Sbjct: 720 SPVISKDQSPPPSPPPSYHPPPPPTKKPEVVVEAPSAS-ETAEEPLQDPNWPPPPPPA 776
Score = 30.0 bits (66), Expect = 5.5
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 16/99 (16%)
Query: 47 VELPHVRAPPPPPPPFAPHAAVSISSSEP---------PPQQFQAQSSYPPGPGRAAAAA 97
V L ++ PPPPP H+ + P P ++ Q Q PP G + A
Sbjct: 489 VSLRKLKRPPPPPR--RTHSLHQRGLAVPDGPLGLPPKPERKQQPQLPRPPTTGGSEGAG 546
Query: 98 SSSSP-----SCTPATSQGHLRTPAQPPPASPAASSSSS 131
++ P S P S G R P + P + + SS S
Sbjct: 547 AAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYS 585
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 48.5 bits (114), Expect = 2e-05
Identities = 44/132 (33%), Positives = 50/132 (37%), Gaps = 33/132 (25%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRA-----AAAASSSSPSC 104
P + PPP PP PH PPP Q ++ GPG A A ASSS+P
Sbjct: 77 PPPQQPPPHQPP--PHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPA 134
Query: 105 TPATS-----QGHLRTPAQP------PPASPAASSSSSF---------------AAVVRY 138
TP TS G TP P PP +P + SS AAV
Sbjct: 135 TPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGP 194
Query: 139 GPGAAAAAGTGG 150
GPG G GG
Sbjct: 195 GPGPKQGPGPGG 206
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 48.1 bits (113), Expect = 2e-05
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 25 SVLKTFPSKRPALAKRYERPTLVELPH---VRAPPPPP---PPFAPHAAVSISSSEPPPQ 78
S++ P+ L K T+++ P APP P PP AP A + +++ PPP
Sbjct: 216 SLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAP-APAAPAAAPPPPP 274
Query: 79 QFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSSSSFAAVVRY 138
A + PPG A+ + P PA +Q A P PA PAA + + +
Sbjct: 275 PAPATLARPPGHPAGPPTAAPAVP--PPAAAQNGGSAGAAPAPA-PAAGGPAGVSG--QP 329
Query: 139 GPGAAAAAGTGGTGSDS 155
GPGAAAAA G ++S
Sbjct: 330 GPGAAAAAPAPGVKAES 346
Score = 42.7 bits (99), Expect = 8e-04
Identities = 35/111 (31%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 57 PPPPPFAPHAAVS----ISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGH 112
P P P AP + + ++ PP A S P P AA AA+ P PAT
Sbjct: 227 PLPKPAAPGTVIQTPPFVGAAAPPAP---AAPSPPAAPAPAAPAAAPPPPPPAPATLARP 283
Query: 113 LRTPAQPPPASP------AASSSSSFAAVVRYGPGAAAAAGTGGTGSDSAS 157
PA PP A+P AA + S A P A AG G A+
Sbjct: 284 PGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAA 334
Score = 42.7 bits (99), Expect = 8e-04
Identities = 50/166 (30%), Positives = 62/166 (37%), Gaps = 17/166 (10%)
Query: 7 PAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHA 66
PA PS P +P + P PA A P P AP PPP A +
Sbjct: 250 PAPAAPSPPAAPAPAAPAAAP---PPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNG 306
Query: 67 AVSISSSEPPPQQF-QAQSSYPPGPGRAAAA----ASSSSPSCTPATSQGHLRTPAQPPP 121
+ ++ P P A S PGPG AAAA + SP + +T A P
Sbjct: 307 GSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGP 366
Query: 122 ASPAAS---------SSSSFAAVVRYGPGAAAAAGTGGTGSDSASL 158
AS AAS + S AAV PG G G+ + SL
Sbjct: 367 ASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSL 412
Score = 37.4 bits (85), Expect = 0.035
Identities = 29/100 (29%), Positives = 37/100 (37%), Gaps = 8/100 (8%)
Query: 54 APPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAA----SSSSPSCTPATS 109
AP PPP A PP + + P GP AA S+ SC P +
Sbjct: 86 APEPPPAGRARPGGGGPQRPGPPSPR---RPLVPAGPAPPAAKLRPPPEGSAGSCAPVPA 142
Query: 110 QGHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAAGTG 149
+ +P PA PA + + A R GPG G G
Sbjct: 143 AAAVAAGPEPAPAGPAKPAGPA-ALAARAGPGPGPGPGPG 181
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 47.8 bits (112), Expect = 3e-05
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
P PPPPPPP PH +S PPP + + + PP P RA AA P P+ +
Sbjct: 282 PSRGGPPPPPPP--PH------NSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVA 333
Query: 110 ---QGHLRTPAQPPPASPAASSS 129
R PPPA P+++ S
Sbjct: 334 VPPPPPNRMYPPPPPALPSSAPS 356
Score = 45.4 bits (106), Expect = 1e-04
Identities = 30/79 (37%), Positives = 35/79 (44%), Gaps = 13/79 (16%)
Query: 50 PHVRAP---PPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTP 106
P RAP PPPPPP P AV PPP + YPP P ++A S P P
Sbjct: 313 PPSRAPTAAPPPPPPSRPSVAVP----PPPPNRM-----YPPPPPALPSSAPSGPPPPPP 363
Query: 107 AT-SQGHLRTPAQPPPASP 124
+ G + P PPP P
Sbjct: 364 SVLGVGPVAPPPPPPPPPP 382
Score = 31.6 bits (70), Expect = 1.9
Identities = 30/117 (25%), Positives = 38/117 (32%), Gaps = 13/117 (11%)
Query: 7 PAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPP------P 60
P GP P + +P PS+ P A P+ P V PPPPP P
Sbjct: 294 PHNSGPPPPPARGRGAPPPP----PSRAPTAAPPPPPPSR---PSVAVPPPPPNRMYPPP 346
Query: 61 PFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPA 117
P A ++ PPP PP P P P+ + T A
Sbjct: 347 PPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTA 403
Score = 29.3 bits (64), Expect = 9.4
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 18/97 (18%)
Query: 7 PAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYER------PTLVELPHVRAPPPPPP 60
P PS P + P + + +P PAL P+++ + V PPPPPP
Sbjct: 322 PPPPPPSRPSVAVPPPPPN--RMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPP 379
Query: 61 PFAPHAAVSISSSEPPPQQFQAQSSY--PPGPGRAAA 95
P P PPP + + P G AA
Sbjct: 380 PPPP--------GPPPPPGLPSDGDHQVPTTAGNKAA 408
>gi|118572603 ubinuclein 1 [Homo sapiens]
Length = 1134
Score = 47.4 bits (111), Expect = 3e-05
Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 36/184 (19%)
Query: 3 EEMQPAEEGPSVPKIYKQRSPYSVL-KTFPSKRPALAKRYERPTLVELPHVRAPPPPPPP 61
+E +P G YK+ S + L K P + AK + P P V P P P
Sbjct: 751 QEKKPESSG------YKELSCQAPLNKGLPEVHQSKAKHHSLPRTSHGPQVAVPVPGPQV 804
Query: 62 FAPHAAVSISSSEPPPQQF--------------------------QAQSSYPPGPGRAAA 95
HA + PP F + Q +P P +
Sbjct: 805 KVFHAGTQQQKNFTPPSPFANKLQGPKASPTQCHRSLLQLVKTAAKGQGFHPSAPATSGG 864
Query: 96 -AASSSSPSCTPATSQGHLRTPAQPPPASPAASS--SSSFAAVVRYGPGAAAAAGTGGTG 152
+ASSSS TPA+S L PA+P S A SS ++ FA+ + ++ ++ +GGT
Sbjct: 865 LSASSSSSHKTPASSSSALSHPAKPHSVSSAGSSYKNNPFASSISKHGVSSGSSSSGGTP 924
Query: 153 SDSA 156
S+
Sbjct: 925 VQSS 928
>gi|118572601 ubinuclein 1 [Homo sapiens]
Length = 1134
Score = 47.4 bits (111), Expect = 3e-05
Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 36/184 (19%)
Query: 3 EEMQPAEEGPSVPKIYKQRSPYSVL-KTFPSKRPALAKRYERPTLVELPHVRAPPPPPPP 61
+E +P G YK+ S + L K P + AK + P P V P P P
Sbjct: 751 QEKKPESSG------YKELSCQAPLNKGLPEVHQSKAKHHSLPRTSHGPQVAVPVPGPQV 804
Query: 62 FAPHAAVSISSSEPPPQQF--------------------------QAQSSYPPGPGRAAA 95
HA + PP F + Q +P P +
Sbjct: 805 KVFHAGTQQQKNFTPPSPFANKLQGPKASPTQCHRSLLQLVKTAAKGQGFHPSAPATSGG 864
Query: 96 -AASSSSPSCTPATSQGHLRTPAQPPPASPAASS--SSSFAAVVRYGPGAAAAAGTGGTG 152
+ASSSS TPA+S L PA+P S A SS ++ FA+ + ++ ++ +GGT
Sbjct: 865 LSASSSSSHKTPASSSSALSHPAKPHSVSSAGSSYKNNPFASSISKHGVSSGSSSSGGTP 924
Query: 153 SDSA 156
S+
Sbjct: 925 VQSS 928
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 47.4 bits (111), Expect = 3e-05
Identities = 49/174 (28%), Positives = 69/174 (39%), Gaps = 27/174 (15%)
Query: 3 EEMQPAEEGPSVPKIYK--------QRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRA 54
E ++P+ PS P I + Q+ + + P+K PA +P L + P
Sbjct: 292 ESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKP-LAQQPGTVK 350
Query: 55 PPPPPPPFAPHAAVSISSSEPPPQQFQAQ--SSYPPGPGRAAAAASSSSPSCTPATSQGH 112
PP PP A + ++PP QQ ++ SS PGP A A TPA G
Sbjct: 351 PPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGP---KALAQPPGVGKTPAQQPGP 407
Query: 113 LRTPA-----------QPPPASPAASSSSSFAAVVRYGPG--AAAAAGTGGTGS 153
+ P QP SPA + + V + GPG A AG G T +
Sbjct: 408 AKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSA 461
Score = 43.1 bits (100), Expect = 6e-04
Identities = 43/133 (32%), Positives = 54/133 (40%), Gaps = 37/133 (27%)
Query: 25 SVLKTFPSKRPALAKRYERPTLVELPHVRAPPP------PPPPFAPHAAVSIS----SSE 74
S +T P+K P+ +LP PPP PPP P +A S S++
Sbjct: 460 SAQQTGPTKPPS-----------QLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTK 508
Query: 75 PPPQQ--------FQAQSSYPPG--PGRAAAAASSSSPS------CTPATSQGHLRTPAQ 118
PPPQQ Q S+ PP PG A +A SP+ T SQ P Q
Sbjct: 509 PPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQ 568
Query: 119 PPPASPAASSSSS 131
PP SP+A S
Sbjct: 569 PPTVSPSAKQPPS 581
Score = 35.8 bits (81), Expect = 0.10
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 6 QPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPH 65
+P+ E P PK Q P V KT P+++P AK + P + P P AP
Sbjct: 380 KPSSEQPG-PKALAQ--PPGVGKT-PAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAP- 434
Query: 66 AAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASP 124
+P P + AQ + GPG+ +A + P+ P+ G PA+PPP P
Sbjct: 435 GPTKTPVQQPGPGKIPAQQA---GPGKTSA--QQTGPTKPPSQLPG----PAKPPPQQP 484
Score = 32.3 bits (72), Expect = 1.1
Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 49 LPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPAT 108
LP PP + H + SS PP Q S PP PGR A S S T T
Sbjct: 66 LPKGSVPPAAAESPSMHRKQELDSSHPPKQ-----SGRPPDPGRPAQPGLSKSR--TTDT 118
Query: 109 SQGHLRTPAQPPPASPAASSSS 130
+ + P + P S S
Sbjct: 119 FRSEQKLPGRSPSTISLKESKS 140
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRA--------AAAASSSS 101
PH ++ P P AP + +S PP QA PP P ++ A AA
Sbjct: 954 PHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQA----PPAPAKSIPVKKETKAPAAEKLE 1009
Query: 102 PSCTPATSQGHLRTPAQPPPASPAAS 127
P A + T +PPP + S
Sbjct: 1010 PKAEQAPTVKRTETEKKPPPIKDSKS 1035
Score = 31.6 bits (70), Expect = 1.9
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
P V + P P PF +++ IS+ PPP PP P P P TS
Sbjct: 2381 PSVSSLPAKPRPFFRSSSLDISAQPPPPP--------PPPPPPPPPPPPPPPPPLPPPTS 2432
Query: 110 QGHLRTPAQP-PPASPAASSSSSFAAV 135
P + ASP +++ F AV
Sbjct: 2433 PKPTILPKKKLTVASPVTTATPLFDAV 2459
Score = 31.2 bits (69), Expect = 2.5
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 26/141 (18%)
Query: 7 PAEE-GPSVPKIYKQRSPYSVLKT----FPSKRPALAKR-YERPTLVELPHVRAPP---- 56
PA++ GP+ P + +P + + P+K P K ++P ++P +A P
Sbjct: 401 PAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTS 460
Query: 57 ------PPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQ 110
PP P A +PPPQQ P PG A + + P
Sbjct: 461 AQQTGPTKPPSQLPGPA------KPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQP 514
Query: 111 GHLRTPAQPPPASPAASSSSS 131
G PA+P P P ++ S
Sbjct: 515 G----PAKPSPQQPGSTKPPS 531
Score = 31.2 bits (69), Expect = 2.5
Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 12/112 (10%)
Query: 32 SKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPG 91
S PA + + R + +++ PPPPPPP P PP + P
Sbjct: 2384 SSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKL 2443
Query: 92 RAAAAASSSSP---SCTPATSQGHLRT---------PAQPPPASPAASSSSS 131
A+ ++++P + T + LR+ PPP P SS S
Sbjct: 2444 TVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPS 2495
Score = 30.8 bits (68), Expect = 3.2
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 18/108 (16%)
Query: 39 KRYERPTLVEL---PHVRAPPP----PPPPFAPHAAVSISSSEPPPQQFQAQSSYPP--- 88
K +RPT +E+ H+RA P PP +P S S P + + S++ P
Sbjct: 3588 KDKKRPTPLEIGYSSHLRADSTVQLAPSPPKSPKVLYSPISPLSPGKALE--SAFVPYEK 3645
Query: 89 ------GPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSSS 130
P + + P +P T++ R+ + P P SP A SS
Sbjct: 3646 PLPDDISPQKVLHPDMAKVPPASPKTAKMMQRSMSDPKPLSPTADESS 3693
Score = 29.3 bits (64), Expect = 9.4
Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 16/132 (12%)
Query: 12 PSVPKIYKQRSPYS----VLKTFPSKRPALAKRYERPT--LVELPHVRAPPPPPPPFAPH 65
PS P+ + +P + V K+ P + K+ P L + P + PPP H
Sbjct: 654 PSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLH 713
Query: 66 AAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPA 125
+ S + +PP +A S P P + + S + P P QP P
Sbjct: 714 GSPSAKAKQPP----EADSLSKPAPPKEPSVPSEQDKA--PVADD----KPKQPKMVKPT 763
Query: 126 ASSSSSFAAVVR 137
SS +A +
Sbjct: 764 TDLVSSSSATTK 775
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 47.4 bits (111), Expect = 3e-05
Identities = 49/174 (28%), Positives = 69/174 (39%), Gaps = 27/174 (15%)
Query: 3 EEMQPAEEGPSVPKIYK--------QRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRA 54
E ++P+ PS P I + Q+ + + P+K PA +P L + P
Sbjct: 292 ESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKP-LAQQPGTVK 350
Query: 55 PPPPPPPFAPHAAVSISSSEPPPQQFQAQ--SSYPPGPGRAAAAASSSSPSCTPATSQGH 112
PP PP A + ++PP QQ ++ SS PGP A A TPA G
Sbjct: 351 PPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGP---KALAQPPGVGKTPAQQPGP 407
Query: 113 LRTPA-----------QPPPASPAASSSSSFAAVVRYGPG--AAAAAGTGGTGS 153
+ P QP SPA + + V + GPG A AG G T +
Sbjct: 408 AKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSA 461
Score = 43.1 bits (100), Expect = 6e-04
Identities = 43/133 (32%), Positives = 54/133 (40%), Gaps = 37/133 (27%)
Query: 25 SVLKTFPSKRPALAKRYERPTLVELPHVRAPPP------PPPPFAPHAAVSIS----SSE 74
S +T P+K P+ +LP PPP PPP P +A S S++
Sbjct: 460 SAQQTGPTKPPS-----------QLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTK 508
Query: 75 PPPQQ--------FQAQSSYPPG--PGRAAAAASSSSPS------CTPATSQGHLRTPAQ 118
PPPQQ Q S+ PP PG A +A SP+ T SQ P Q
Sbjct: 509 PPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQ 568
Query: 119 PPPASPAASSSSS 131
PP SP+A S
Sbjct: 569 PPTVSPSAKQPPS 581
Score = 35.8 bits (81), Expect = 0.10
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 6 QPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPH 65
+P+ E P PK Q P V KT P+++P AK + P + P P AP
Sbjct: 380 KPSSEQPG-PKALAQ--PPGVGKT-PAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAP- 434
Query: 66 AAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASP 124
+P P + AQ + GPG+ +A + P+ P+ G PA+PPP P
Sbjct: 435 GPTKTPVQQPGPGKIPAQQA---GPGKTSA--QQTGPTKPPSQLPG----PAKPPPQQP 484
Score = 32.3 bits (72), Expect = 1.1
Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 49 LPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPAT 108
LP PP + H + SS PP Q S PP PGR A S S T T
Sbjct: 66 LPKGSVPPAAAESPSMHRKQELDSSHPPKQ-----SGRPPDPGRPAQPGLSKSR--TTDT 118
Query: 109 SQGHLRTPAQPPPASPAASSSS 130
+ + P + P S S
Sbjct: 119 FRSEQKLPGRSPSTISLKESKS 140
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRA--------AAAASSSS 101
PH ++ P P AP + +S PP QA PP P ++ A AA
Sbjct: 954 PHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQA----PPAPAKSIPVKKETKAPAAEKLE 1009
Query: 102 PSCTPATSQGHLRTPAQPPPASPAAS 127
P A + T +PPP + S
Sbjct: 1010 PKAEQAPTVKRTETEKKPPPIKDSKS 1035
Score = 31.6 bits (70), Expect = 1.9
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
P V + P P PF +++ IS+ PPP PP P P P TS
Sbjct: 2381 PSVSSLPAKPRPFFRSSSLDISAQPPPPP--------PPPPPPPPPPPPPPPPPLPPPTS 2432
Query: 110 QGHLRTPAQP-PPASPAASSSSSFAAV 135
P + ASP +++ F AV
Sbjct: 2433 PKPTILPKKKLTVASPVTTATPLFDAV 2459
Score = 31.2 bits (69), Expect = 2.5
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 26/141 (18%)
Query: 7 PAEE-GPSVPKIYKQRSPYSVLKT----FPSKRPALAKR-YERPTLVELPHVRAPP---- 56
PA++ GP+ P + +P + + P+K P K ++P ++P +A P
Sbjct: 401 PAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTS 460
Query: 57 ------PPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQ 110
PP P A +PPPQQ P PG A + + P
Sbjct: 461 AQQTGPTKPPSQLPGPA------KPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQP 514
Query: 111 GHLRTPAQPPPASPAASSSSS 131
G PA+P P P ++ S
Sbjct: 515 G----PAKPSPQQPGSTKPPS 531
Score = 31.2 bits (69), Expect = 2.5
Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 12/112 (10%)
Query: 32 SKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPG 91
S PA + + R + +++ PPPPPPP P PP + P
Sbjct: 2384 SSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKL 2443
Query: 92 RAAAAASSSSP---SCTPATSQGHLRT---------PAQPPPASPAASSSSS 131
A+ ++++P + T + LR+ PPP P SS S
Sbjct: 2444 TVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPS 2495
Score = 30.8 bits (68), Expect = 3.2
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 18/108 (16%)
Query: 39 KRYERPTLVEL---PHVRAPPP----PPPPFAPHAAVSISSSEPPPQQFQAQSSYPP--- 88
K +RPT +E+ H+RA P PP +P S S P + + S++ P
Sbjct: 3588 KDKKRPTPLEIGYSSHLRADSTVQLAPSPPKSPKVLYSPISPLSPGKALE--SAFVPYEK 3645
Query: 89 ------GPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSSS 130
P + + P +P T++ R+ + P P SP A SS
Sbjct: 3646 PLPDDISPQKVLHPDMAKVPPASPKTAKMMQRSMSDPKPLSPTADESS 3693
Score = 29.3 bits (64), Expect = 9.4
Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 16/132 (12%)
Query: 12 PSVPKIYKQRSPYS----VLKTFPSKRPALAKRYERPT--LVELPHVRAPPPPPPPFAPH 65
PS P+ + +P + V K+ P + K+ P L + P + PPP H
Sbjct: 654 PSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLH 713
Query: 66 AAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPA 125
+ S + +PP +A S P P + + S + P P QP P
Sbjct: 714 GSPSAKAKQPP----EADSLSKPAPPKEPSVPSEQDKA--PVADD----KPKQPKMVKPT 763
Query: 126 ASSSSSFAAVVR 137
SS +A +
Sbjct: 764 TDLVSSSSATTK 775
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 47.0 bits (110), Expect = 4e-05
Identities = 44/154 (28%), Positives = 59/154 (38%), Gaps = 9/154 (5%)
Query: 6 QPAEEGPSVPKIYKQRSPYSVLKT--FPSKRPALAKRYERPTLVELPHVRAPPPPPPPFA 63
+P +VP + SP + + T P+ A E PT A P P P +
Sbjct: 1038 EPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPT----SPAAAVPTPEEPTS 1093
Query: 64 PHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPAS 123
P AAV P A P P AAA + +PA + PA P PA
Sbjct: 1094 PAAAVPTPEEPTSPA---AAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAV 1150
Query: 124 PAASSSSSFAAVVRYGPGAAAAAGTGGTGSDSAS 157
P S+S A V +A+ A T ++SAS
Sbjct: 1151 PTPEESASAAVAVPTPEESASPAAAVPTPAESAS 1184
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 9/133 (6%)
Query: 6 QPAEEGPSVPKIYKQRSPYSVLKT--FPSKRPALAKRYERPTLVELPHVRAPPPPPPPFA 63
+P +VP + SP + + T P+ A E PT A P P P +
Sbjct: 1064 EPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPT----SPAAAVPTPEEPAS 1119
Query: 64 PHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPAS 123
P AAV P A P P A A + S + A + A P A
Sbjct: 1120 PAAAVPTPEEPASPA---AAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAV 1176
Query: 124 PAASSSSSFAAVV 136
P + S+SFAAVV
Sbjct: 1177 PTPAESASFAAVV 1189
Score = 37.7 bits (86), Expect = 0.026
Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 20/177 (11%)
Query: 6 QPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPF--- 62
+P +VP + SP + + T P + + A P P P P P F
Sbjct: 1090 EPTSPAAAVPTPEEPTSPAAAVPT-PEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAP 1148
Query: 63 ---APHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAAS-------SSSPSC---TPATS 109
P + S + + P P++ + ++ P P +A+ A+ +SP+ TPA
Sbjct: 1149 AVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAM 1208
Query: 110 QGHLRTPAQPPPASPAASSSSSFAAVV---RYGPGAAAAAGTGGTGSDSASLELSAE 163
L P + P + +S AA V AAA T + SA+ L+ E
Sbjct: 1209 VATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPE 1265
Score = 34.3 bits (77), Expect = 0.29
Identities = 37/151 (24%), Positives = 49/151 (32%), Gaps = 2/151 (1%)
Query: 7 PAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHA 66
P E + ++ P S P+ + PT E A PPP A
Sbjct: 984 PEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPA 1043
Query: 67 AVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAA 126
A + EP A P P AAA + +PA + P P A P
Sbjct: 1044 AAVPTPEEPTSP--AAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTP 1101
Query: 127 SSSSSFAAVVRYGPGAAAAAGTGGTGSDSAS 157
+S AA V A+ A T + AS
Sbjct: 1102 EEPTSPAAAVPTPEEPASPAAAVPTPEEPAS 1132
Score = 30.4 bits (67), Expect = 4.2
Identities = 37/133 (27%), Positives = 47/133 (35%), Gaps = 5/133 (3%)
Query: 7 PAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRY---ERPTLVELPHVRAPPPPPPPFA 63
P E P+V Q S + F + ALA E E P A P
Sbjct: 929 PEETAPAVAAAITQEG-MSAVAGFSPEWAALAITVPITEEDGTPEGPVTPATTVHAPEEP 987
Query: 64 PHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPAS 123
AAV +S+ E P A + P P AAA + +PA + P P A
Sbjct: 988 DTAAVRVSTPEEPASPAAAVPT-PEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAV 1046
Query: 124 PAASSSSSFAAVV 136
P +S AA V
Sbjct: 1047 PTPEEPTSPAAAV 1059
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 46.2 bits (108), Expect = 7e-05
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 31/168 (18%)
Query: 14 VPKIYKQRSPYSVLKTFPSK-RPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSI-- 70
VPK+ +P S P P + + + P V +P PPPPP AP ++
Sbjct: 1236 VPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPV------SPKPPPPPTAPKPVKAVAG 1289
Query: 71 --------SSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPA 122
S + P +Q A + PPG + A SP+ P+ L PA+PP A
Sbjct: 1290 LPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGA----SPAKPPSPGAPALHVPAKPPRA 1345
Query: 123 SPAASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDA 170
+ AA+++++ A A G + DSA +L S + A
Sbjct: 1346 AAAAAAAAA----------APPAPPEGASPGDSARQKLEETSACLAAA 1383
Score = 41.6 bits (96), Expect = 0.002
Identities = 29/118 (24%), Positives = 42/118 (35%), Gaps = 2/118 (1%)
Query: 11 GPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSI 70
GP P++ + + P P K + + LP A P P P A ++
Sbjct: 1254 GPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVK--AVAGLPSGSAGPSPAPSPARQPPAAL 1311
Query: 71 SSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASS 128
+ P A + PP PG A + P A + PA P ASP S+
Sbjct: 1312 AKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGDSA 1369
Score = 32.7 bits (73), Expect = 0.85
Identities = 29/109 (26%), Positives = 36/109 (33%), Gaps = 22/109 (20%)
Query: 43 RPTLVELPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSP 102
RP + PPPPPP +EPPP PP G A P
Sbjct: 1180 RPASEQAGPPELPPPPPP------------AEPPPTDLAHLPPLPPPEGEA------RKP 1221
Query: 103 SCTPATSQGHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAAGTGGT 151
+ P + + L P SP +S V GPG+ GT
Sbjct: 1222 AKPPVSPKPVLTQPVPKLQGSPTPTSKK----VPLPGPGSPEVKRAHGT 1266
>gi|21536355 TBP-associated factor 6 isoform gamma [Homo sapiens]
Length = 667
Score = 46.2 bits (108), Expect = 7e-05
Identities = 49/177 (27%), Positives = 63/177 (35%), Gaps = 22/177 (12%)
Query: 19 KQRSPYSVLKTFPSKRPALAKRYERPTLVELP-------HVRAPPPPPPPFAPHAAVSIS 71
+Q P L P P + P + LP APP P PP +S S
Sbjct: 475 QQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSS 534
Query: 72 SSEPPPQQFQAQSSYPPGPGRAAAA-ASSSSPSCTPATSQGHLRTPAQPPPASPAASSSS 130
SS P QQ + S+ PG G + +++ PS P T A PP +P+ S
Sbjct: 535 SSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTA-PPSTAPSGPGSV 593
Query: 131 SFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLSLLNCGGK 187
VV P G GG S + + A S L A CGGK
Sbjct: 594 QKYIVVSLPP---TGEGKGGPTSHPSPVPPPASSPSPLSGSAL----------CGGK 637
>gi|21536357 TBP-associated factor 6 isoform delta [Homo sapiens]
Length = 667
Score = 45.8 bits (107), Expect = 1e-04
Identities = 49/176 (27%), Positives = 62/176 (35%), Gaps = 22/176 (12%)
Query: 20 QRSPYSVLKTFPSKRPALAKRYERPTLVELP-------HVRAPPPPPPPFAPHAAVSISS 72
Q P L P P + P + LP APP P PP +S SS
Sbjct: 476 QPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSS 535
Query: 73 SEPPPQQFQAQSSYPPGPGRAAAA-ASSSSPSCTPATSQGHLRTPAQPPPASPAASSSSS 131
S P QQ + S+ PG G + +++ PS P T A PP +P+ S
Sbjct: 536 SAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTA-PPSTAPSGPGSVQ 594
Query: 132 FAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLSLLNCGGK 187
VV P G GG S + + A S L A CGGK
Sbjct: 595 KYIVVSLPP---TGEGKGGPTSHPSPVPPPASSPSPLSGSAL----------CGGK 637
>gi|5032147 TBP-associated factor 6 isoform alpha [Homo sapiens]
Length = 677
Score = 45.8 bits (107), Expect = 1e-04
Identities = 49/176 (27%), Positives = 62/176 (35%), Gaps = 22/176 (12%)
Query: 20 QRSPYSVLKTFPSKRPALAKRYERPTLVELP-------HVRAPPPPPPPFAPHAAVSISS 72
Q P L P P + P + LP APP P PP +S SS
Sbjct: 486 QPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSS 545
Query: 73 SEPPPQQFQAQSSYPPGPGRAAAA-ASSSSPSCTPATSQGHLRTPAQPPPASPAASSSSS 131
S P QQ + S+ PG G + +++ PS P T A PP +P+ S
Sbjct: 546 SAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTA-PPSTAPSGPGSVQ 604
Query: 132 FAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLSLLNCGGK 187
VV P G GG S + + A S L A CGGK
Sbjct: 605 KYIVVSLPP---TGEGKGGPTSHPSPVPPPASSPSPLSGSAL----------CGGK 647
>gi|21536359 TBP-associated factor 6 isoform alpha [Homo sapiens]
Length = 677
Score = 45.8 bits (107), Expect = 1e-04
Identities = 49/176 (27%), Positives = 62/176 (35%), Gaps = 22/176 (12%)
Query: 20 QRSPYSVLKTFPSKRPALAKRYERPTLVELP-------HVRAPPPPPPPFAPHAAVSISS 72
Q P L P P + P + LP APP P PP +S SS
Sbjct: 486 QPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSS 545
Query: 73 SEPPPQQFQAQSSYPPGPGRAAAA-ASSSSPSCTPATSQGHLRTPAQPPPASPAASSSSS 131
S P QQ + S+ PG G + +++ PS P T A PP +P+ S
Sbjct: 546 SAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTA-PPSTAPSGPGSVQ 604
Query: 132 FAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLSLLNCGGK 187
VV P G GG S + + A S L A CGGK
Sbjct: 605 KYIVVSLPP---TGEGKGGPTSHPSPVPPPASSPSPLSGSAL----------CGGK 647
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 45.8 bits (107), Expect = 1e-04
Identities = 47/153 (30%), Positives = 63/153 (41%), Gaps = 13/153 (8%)
Query: 13 SVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSIS- 71
+VPKI S S L + S +L RP ++ PPP P PH + S
Sbjct: 253 AVPKIESPDSSSSSLSSGSSPPGSLPSA--RPLSLDGADSAPPPPAPSAPPPHHSQGFSV 310
Query: 72 -----SSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAA 126
S PQ A+ S G A+AA+SS P + G +P Q S
Sbjct: 311 DNIMTSLRGSPQSAAAELS----SGLLASAAASSRAGIAPPLALGAY-SPGQSSLYSSPC 365
Query: 127 SSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLE 159
S +SS + G GA AA G GG G+ +L+
Sbjct: 366 SQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQ 398
Score = 38.9 bits (89), Expect = 0.012
Identities = 50/187 (26%), Positives = 70/187 (37%), Gaps = 35/187 (18%)
Query: 33 KRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSISSSEP-PPQQFQAQSSYPPGPG 91
K P R P E AP P PPP + + + P PPQ ++ G G
Sbjct: 192 KEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAAL--GSG 249
Query: 92 RAAAA-------ASSSS-----------PSCTPATSQGHLRTPAQPPPASPAASSSSSFA 133
AAA +SSSS PS P + G P P P++P S F+
Sbjct: 250 SAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFS 309
Query: 134 -----AVVRYGPGAAAAAGTGGTGSDSAS---------LELSAESRMILDAFAQQCSRVL 179
+R P +AAA + G + +A+ L L A S ++ CS+
Sbjct: 310 VDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTS 369
Query: 180 SLLNCGG 186
S + GG
Sbjct: 370 SAGSSGG 376
Score = 34.7 bits (78), Expect = 0.22
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 31/107 (28%)
Query: 33 KRPALAKRYERPTLVELPHVRAPPPP---PPPFAPHAAVSISSSEPPPQQFQAQSSYPPG 89
K+ A+ + E+ L H++ PPPP PPP PP+Q + P
Sbjct: 176 KKDAVKDKEEKDRL----HLKEPPPPGRQPPP-------------APPEQADGNAPGPQP 218
Query: 90 PGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSSSSFAAVV 136
P + + +C P+ P P SPAA+ S AA V
Sbjct: 219 PPVRIQDIKTENGTC-----------PSPPQPLSPAAALGSGSAAAV 254
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 45.8 bits (107), Expect = 1e-04
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 57 PPPPPFAPHAAVSI---SSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHL 113
PPP P H+ + +PPP+ P GPG A PS A+
Sbjct: 550 PPPSPLLNHSLFGVLTGGGGQPPPEPLLPP---PGGPGPPLAPGEPEGPSLLVASLLPPP 606
Query: 114 RTPAQPPPASPAASSSSSFAAVVRYGP----GAAAAAGTGGTGSDSAS 157
+ PPP++P ++ +SF ++ GP G +A G GG + S
Sbjct: 607 PSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPSGEPFS 654
Score = 35.4 bits (80), Expect = 0.13
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 49 LPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSP------ 102
LP AP P PP P A+S+++ S P G A +SSSP
Sbjct: 204 LPRGNAPSPAPP---PPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHASSSPPSDPPL 260
Query: 103 -----SCTPATSQGHLRTPAQPPPASPAASSSSSFAAVVRYGP--GAAAAAGTGGTGSDS 155
+ TP PA P PAS SS++ + GP GA G G +
Sbjct: 261 FHCSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEGPGAPPFLA 320
Query: 156 ASLELSAESR 165
+SL LSA ++
Sbjct: 321 SSL-LSAAAK 329
Score = 32.7 bits (73), Expect = 0.85
Identities = 37/166 (22%), Positives = 53/166 (31%), Gaps = 28/166 (16%)
Query: 6 QPAEEGPSV-------PKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPP 58
+P + PS P + R P +V + + P +R +P + P P
Sbjct: 345 RPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSRPRAPAPVPQPFSLPEP 404
Query: 59 PPPFAPHAAVSISSSEPPPQQ-------FQAQSSYPPGPGRAAAAASSSSP--------S 103
P P + P P + + PP P SS SP
Sbjct: 405 SQPILPSVLSLLGLPTPGPSHSDGSFNLLGSDAHLPPPP-----TLSSGSPPQPRHPIQP 459
Query: 104 CTPATSQGHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAAGTG 149
P T+ G L + PA PAAS + + V P G G
Sbjct: 460 SLPGTTSGSL-SSVPGAPAPPAASKAPVVPSPVLQSPSEGLGMGAG 504
Score = 30.4 bits (67), Expect = 4.2
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSS-------YPPGPGRAAAAASSSSP 102
P PP PP P S PP QA + +PP + SSSP
Sbjct: 142 PPSARPPCRVPPTTPLNGGPGSLPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSSSP 201
Query: 103 SCTPATSQGHLRTPAQPPPASPAASSSS 130
P +G+ +PA PPP + + ++ S
Sbjct: 202 RFLP---RGNAPSPAPPPPPAISLNAPS 226
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 45.4 bits (106), Expect = 1e-04
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
P AP PPP P AP AA + P +S+ AAAAA +++P A S
Sbjct: 62 PFQAAPAPPPTPQAP-AAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS 120
Query: 110 Q---GHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAAGT 148
L+ P PPP P S+ ++ AA AAAA T
Sbjct: 121 TVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAAT 162
Score = 30.4 bits (67), Expect = 4.2
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 16/66 (24%)
Query: 47 VELPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSS---SPS 103
V+ ++ PP PPPP PPP A + PP AAA+++ +P+
Sbjct: 122 VDTAALKQPPAPPPP-------------PPPVSAPAAEAAPPASAATIAAAAATAVVAPT 168
Query: 104 CTPATS 109
T A +
Sbjct: 169 STVAVA 174
Score = 29.3 bits (64), Expect = 9.4
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 35 PALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAA 94
PA A + L + P PPPPPP AP A + PP A ++ A
Sbjct: 116 PAAASTVDTAALKQPP--APPPPPPPVSAPAA-----EAAPP-----ASAATIAAAAATA 163
Query: 95 AAASSSSPSCTPATSQGHLRTPAQPP 120
A +S+ + P S +T ++ P
Sbjct: 164 VVAPTSTVAVAPVASALEKKTKSKGP 189
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 45.4 bits (106), Expect = 1e-04
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
P AP PPP P AP AA + P +S+ AAAAA +++P A S
Sbjct: 62 PFQAAPAPPPTPQAP-AAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS 120
Query: 110 Q---GHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAAGT 148
L+ P PPP P S+ ++ AA AAAA T
Sbjct: 121 TVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAAT 162
Score = 30.4 bits (67), Expect = 4.2
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 16/66 (24%)
Query: 47 VELPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSS---SPS 103
V+ ++ PP PPPP PPP A + PP AAA+++ +P+
Sbjct: 122 VDTAALKQPPAPPPP-------------PPPVSAPAAEAAPPASAATIAAAAATAVVAPT 168
Query: 104 CTPATS 109
T A +
Sbjct: 169 STVAVA 174
Score = 29.3 bits (64), Expect = 9.4
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 35 PALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAA 94
PA A + L + P PPPPPP AP A + PP A ++ A
Sbjct: 116 PAAASTVDTAALKQPP--APPPPPPPVSAPAA-----EAAPP-----ASAATIAAAAATA 163
Query: 95 AAASSSSPSCTPATSQGHLRTPAQPP 120
A +S+ + P S +T ++ P
Sbjct: 164 VVAPTSTVAVAPVASALEKKTKSKGP 189
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 45.4 bits (106), Expect = 1e-04
Identities = 40/140 (28%), Positives = 54/140 (38%), Gaps = 9/140 (6%)
Query: 31 PSKRPALAKRYERPTLVELPHVRAPPPPPP------PFAPHAAVSISSSEPPPQQFQAQS 84
P P + P + + ++AP PPP PF+P A+ +S S PP Q
Sbjct: 640 PPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL 699
Query: 85 SYPP---GPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSSSSFAAVVRYGPG 141
+ PP P A+ S S + P P Q PP+ PA+ S A P
Sbjct: 700 AAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPP 759
Query: 142 AAAAAGTGGTGSDSASLELS 161
AA S ASL +S
Sbjct: 760 LLAAPPLQVPPSPPASLPMS 779
Score = 43.1 bits (100), Expect = 6e-04
Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 10/160 (6%)
Query: 7 PAEEGPSVPKIYKQRSPYS------VLKTF-PSKRPALAKRYERPTLVELPHVRAPPPPP 59
P+ + P+ ++ ++P+S V F P P ++ P+ P + APP
Sbjct: 648 PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP-PSLAAPPLQV 706
Query: 60 PPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHL--RTPA 117
PP P + S+ PPPQ ++ P + A+ SPS TP L P
Sbjct: 707 PPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPL 766
Query: 118 QPPPASPAASSSSSFAAVVRYGPGAAAAAGTGGTGSDSAS 157
Q PP+ PA+ S A P A A S AS
Sbjct: 767 QVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPAS 806
Score = 40.8 bits (94), Expect = 0.003
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 31 PSKRPALAKRYERPTLVELPHVRAPPPPP-----------PPFAPHAAVS--ISSSEPPP 77
P P+ P L+ P ++ PP PP PP AP A + + + PP
Sbjct: 745 PPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPP 804
Query: 78 QQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASP 124
F Q+ + P + ++ P P + L+ P PPASP
Sbjct: 805 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPS-PPASP 850
Score = 40.4 bits (93), Expect = 0.004
Identities = 40/143 (27%), Positives = 54/143 (37%), Gaps = 20/143 (13%)
Query: 5 MQPAEEGPSVPKIYKQRSPYSV----LKTFPSKRPALAKRYERPTLVELPHVRAPP---- 56
M P E S+ Q P S+ L+ PS P + P + PH+ PP
Sbjct: 509 MPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAP--LTTPHLETPPCPAP 566
Query: 57 -----PPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPG--PGRAAAAASSSSPSCTPATS 109
PP P P S + PPPQ A +S P P + ++ P P +
Sbjct: 567 CPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLA 626
Query: 110 QGHLRTPAQP---PPASPAASSS 129
L+ P P PP SP A+ S
Sbjct: 627 LPPLQAPPSPPASPPLSPLATPS 649
Score = 37.7 bits (86), Expect = 0.026
Identities = 49/188 (26%), Positives = 68/188 (36%), Gaps = 39/188 (20%)
Query: 5 MQPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAP 64
+Q P+ P + R P P+ P + R TL P PPPPP +P
Sbjct: 840 LQVPPSPPASPTLQAPRRP-------PTPGPDTSVSGPRLTLALAPG----PPPPPSRSP 888
Query: 65 HAAVS-------ISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPAT-SQG----- 111
+ +S SS+ P++ + S P G A+ + +C PA S+G
Sbjct: 889 SSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPL 948
Query: 112 -HLRTPAQPPPASPAASSSSSFAAVVRY---GPGAAAAA----------GTGGTGSDSAS 157
P P P PA S+ Y GP +A A GT G G +A
Sbjct: 949 AFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSG-GKAAAG 1007
Query: 158 LELSAESR 165
A SR
Sbjct: 1008 AGAGASSR 1015
Score = 36.2 bits (82), Expect = 0.077
Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 25/123 (20%)
Query: 7 PAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHA 66
P + PS P + ++P+S + P + + PPP PP
Sbjct: 796 PLQALPSPPASFPGQAPFSPSASLP-----------------MSPLATPPPQAPPVLAAP 838
Query: 67 AVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAA 126
+ + S P QA PP PG S S P T A + G P PP SP++
Sbjct: 839 LLQVPPSPPASPTLQAPRR-PPTPG---PDTSVSGPRLTLALAPG----PPPPPSRSPSS 890
Query: 127 SSS 129
+ S
Sbjct: 891 TLS 893
Score = 35.4 bits (80), Expect = 0.13
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
P PP PPP A + + S P ++ PP AA P PA+
Sbjct: 718 PSATPPPQAPPPLAA-PPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASL 776
Query: 110 QGHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELS 161
+ A+PPP +P A ++ A+ P A+ S SASL +S
Sbjct: 777 P--MSPLAKPPPQAPPALATPPLQAL----PSPPASFPGQAPFSPSASLPMS 822
Score = 34.3 bits (77), Expect = 0.29
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 35 PALAKRYERP-TLVELPH-VRAPPPPPPPFAPHAAVSISS----SEPPPQQFQAQSSYPP 88
PA+A+R T V LP + P PP P +VS +S +EP P + S+
Sbjct: 174 PAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA--- 230
Query: 89 GPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASS 128
G G A+ S S S TP +S A+ P +PA S
Sbjct: 231 GGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPS 270
Score = 33.9 bits (76), Expect = 0.38
Identities = 37/131 (28%), Positives = 47/131 (35%), Gaps = 12/131 (9%)
Query: 7 PAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPH-----VRAPPPPPPP 61
P + PS +P S+ P PALA P L LP + PPP PP
Sbjct: 568 PLQAPPSPLTTPPPETPSSIATPPPQAPPALAS----PPLQGLPSPPLSPLATPPPQAPP 623
Query: 62 FAPHAAVSISSSEP--PPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQP 119
+ S P PP A S P P A + S P+ +P
Sbjct: 624 XLALPPLQAPPSPPASPPLSPLATPS-PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS 682
Query: 120 PPASPAASSSS 130
PP SP+A+ S
Sbjct: 683 PPVSPSATPPS 693
Score = 33.5 bits (75), Expect = 0.50
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 14/110 (12%)
Query: 31 PSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSISSSEPPPQ--------QFQA 82
P P ++ P V P + APP PP P + ++PPPQ QA
Sbjct: 741 PPASPPMSPSATPPPRVP-PLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQA 799
Query: 83 QSSYPPG-PGRAAAAASSSSP----SCTPATSQGHLRTPAQPPPASPAAS 127
S P PG+A + S+S P + P + L P P SP AS
Sbjct: 800 LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS 849
Score = 33.1 bits (74), Expect = 0.65
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 13/103 (12%)
Query: 50 PHVRAPPPPPPPFAPHA-----AVSISSSEPPPQQFQA-------QSSYPPGPGRAAAAA 97
P P PPPP P A A +P ++ +S+ GP R+A +
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTS 86
Query: 98 SSSSPSCTPATSQGHLRTPAQPPPASPAASSSSSFAAVVRYGP 140
S + S PA+ +G PA+ P SS + R GP
Sbjct: 87 SRNPASRPPASGRGERAPPAKNTSPGP-VSSPGRASGTTRPGP 128
Score = 31.6 bits (70), Expect = 1.9
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 45 TLVELPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSC 104
TL P + P P PP +P A S+ + PP +Q+ PP A S +
Sbjct: 330 TLPPSPPLATPLPLAPP-SPSAPPSLQTLPSPPATPPSQA--PPSMTTPPMQAPPSLQTI 386
Query: 105 TPATSQGHLRTPAQPPPASPAASSS 129
P L +P+ P SP A SS
Sbjct: 387 PPIQVPHSLTSPSLQAPPSPLALSS 411
Score = 30.4 bits (67), Expect = 4.2
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 91 GRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAAGTGG 150
G AA ++ +P G +P PPP +PAA A V P A A G GG
Sbjct: 11 GAAARTPAARAPGLLTPRPPG---SPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGG 67
Score = 30.4 bits (67), Expect = 4.2
Identities = 31/129 (24%), Positives = 42/129 (32%), Gaps = 16/129 (12%)
Query: 7 PAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHA 66
PA PK + P V PAL P P P PPP +A
Sbjct: 266 PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPP--DNA 323
Query: 67 AVSISSSEPP-PQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPA 125
A + ++ PP P PP P + + SP PA PP +P
Sbjct: 324 ATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSP-------------PATPPSQAPP 370
Query: 126 ASSSSSFAA 134
+ ++ A
Sbjct: 371 SMTTPPMQA 379
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 45.4 bits (106), Expect = 1e-04
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 52 VRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGR-AAAAASSSSPSCTPATSQ 110
V APP P P A S+ + P P ++ P AAAAA++++P TPA++Q
Sbjct: 8 VSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPASAQ 67
Query: 111 GHLRTPAQPPPASPAASSSSSFAAVVRYGP 140
+TPA P PA VVR P
Sbjct: 68 APAQTPA-PALPGPALPGPFPGGRVVRLHP 96
Score = 32.7 bits (73), Expect = 0.85
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 17/81 (20%)
Query: 84 SSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSSSSFAAVVRYGPGAA 143
S+ P P AAA +S P+ TPA PA P + A +SSS AA
Sbjct: 9 SAPPATPTPVPAAAPASVPAPTPA--------PAAAPVPAAAPASSSD---------PAA 51
Query: 144 AAAGTGGTGSDSASLELSAES 164
AAA T G AS + A++
Sbjct: 52 AAAATAAPGQTPASAQAPAQT 72
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.4 bits (106), Expect = 1e-04
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 55 PPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLR 114
PPPPPPP ++ + PPP Q++ PP P +ASS +P P S+
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPP----PQNNKPPVPSTPRPSASSQAPPPPPPPSR---- 315
Query: 115 TPAQPPPASPAASSS 129
PPP P++S +
Sbjct: 316 --PGPPPLPPSSSGN 328
Score = 37.4 bits (85), Expect = 0.035
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 53 RAPPPPPPP-------FAPHAAVSISSSEPPPQQFQAQSSYP--PGPGRAAAAASSSSPS 103
+APPPPPPP P ++ + + P + SS P P PGR+ S
Sbjct: 305 QAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSER 364
Query: 104 CTPATSQGHLRTPAQPPPASPAASSSSSFA 133
P R+ PPP + + S+S A
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRA 394
Score = 36.6 bits (83), Expect = 0.059
Identities = 28/85 (32%), Positives = 32/85 (37%), Gaps = 16/85 (18%)
Query: 51 HVRAPPPPPP-------PFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPS 103
H A PPPPP P P + S + PPP P PG SSS
Sbjct: 278 HREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPP--------PSRPGPPPLPPSSSGND 329
Query: 104 CTPATSQGHLRTPAQPPP-ASPAAS 127
TP Q +L + PP SP S
Sbjct: 330 ETPRLPQRNLSLSSSTPPLPSPGRS 354
Score = 31.6 bits (70), Expect = 1.9
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 19/112 (16%)
Query: 23 PYSVLKTFPSK-RPALAKRYER--PTLVELPHVRAPPPPPPPFAPHAAVS---------- 69
P S+ PS RP + + R P + P +P P PPPF + +
Sbjct: 180 PDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSP 239
Query: 70 ISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPP 121
+SSS P F + PP P R A P P ++ + A PPP
Sbjct: 240 LSSSSP----FSNRPPLPPTPSR--ALDDKPPPPPPPVGNRPSIHREAVPPP 285
Score = 29.6 bits (65), Expect = 7.2
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 27/122 (22%)
Query: 31 PSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSI------------------SS 72
PS+RP P + + P P PPPPP + + + S S
Sbjct: 361 PSERPP-------PPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSG 413
Query: 73 SEPP--PQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSSS 130
PP P + A + PP P + SP S+ + + PP P ++
Sbjct: 414 PRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTK 473
Query: 131 SF 132
S+
Sbjct: 474 SY 475
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.4 bits (106), Expect = 1e-04
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 55 PPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLR 114
PPPPPPP ++ + PPP Q++ PP P +ASS +P P S+
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPP----PQNNKPPVPSTPRPSASSQAPPPPPPPSR---- 315
Query: 115 TPAQPPPASPAASSS 129
PPP P++S +
Sbjct: 316 --PGPPPLPPSSSGN 328
Score = 37.4 bits (85), Expect = 0.035
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 53 RAPPPPPPP-------FAPHAAVSISSSEPPPQQFQAQSSYP--PGPGRAAAAASSSSPS 103
+APPPPPPP P ++ + + P + SS P P PGR+ S
Sbjct: 305 QAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSER 364
Query: 104 CTPATSQGHLRTPAQPPPASPAASSSSSFA 133
P R+ PPP + + S+S A
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRA 394
Score = 36.6 bits (83), Expect = 0.059
Identities = 28/85 (32%), Positives = 32/85 (37%), Gaps = 16/85 (18%)
Query: 51 HVRAPPPPPP-------PFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPS 103
H A PPPPP P P + S + PPP P PG SSS
Sbjct: 278 HREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPP--------PSRPGPPPLPPSSSGND 329
Query: 104 CTPATSQGHLRTPAQPPP-ASPAAS 127
TP Q +L + PP SP S
Sbjct: 330 ETPRLPQRNLSLSSSTPPLPSPGRS 354
Score = 31.6 bits (70), Expect = 1.9
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 19/112 (16%)
Query: 23 PYSVLKTFPSK-RPALAKRYER--PTLVELPHVRAPPPPPPPFAPHAAVS---------- 69
P S+ PS RP + + R P + P +P P PPPF + +
Sbjct: 180 PDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSP 239
Query: 70 ISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPP 121
+SSS P F + PP P R A P P ++ + A PPP
Sbjct: 240 LSSSSP----FSNRPPLPPTPSR--ALDDKPPPPPPPVGNRPSIHREAVPPP 285
Score = 29.6 bits (65), Expect = 7.2
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 27/122 (22%)
Query: 31 PSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSI------------------SS 72
PS+RP P + + P P PPPPP + + + S S
Sbjct: 361 PSERPP-------PPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSG 413
Query: 73 SEPP--PQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSSS 130
PP P + A + PP P + SP S+ + + PP P ++
Sbjct: 414 PRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTK 473
Query: 131 SF 132
S+
Sbjct: 474 SY 475
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 45.4 bits (106), Expect = 1e-04
Identities = 34/103 (33%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
P PP PPP +EPP F S P P AAAA + P C A
Sbjct: 994 PPAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPGFPSPPAPP--AAAATAVGPPLCRLAFE 1051
Query: 110 QGHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAAGTGGTG 152
PA+ P + P + GPGA A GTGG G
Sbjct: 1052 DESPPAPARWPRSDPESQPL--------LGPGAGGAGGTGGAG 1086
Score = 31.2 bits (69), Expect = 2.5
Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 23/117 (19%)
Query: 54 APPPPPPPFAPHAAVSISSSEPPPQQF------------QAQSSYPPGPGRAAAAASSSS 101
A PPPPP P A P P F + + + PPG A
Sbjct: 906 AKPPPPPQPLPSPAYPAPRPAPGPAPFVPRERASVDRWRRTKGAGPPGGAGLADGFHRYY 965
Query: 102 PSCTP-----------ATSQGHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAAG 147
P A +G P PP A P S+ A+VR A AG
Sbjct: 966 GPIEPQGLGLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPAG 1022
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 45.4 bits (106), Expect = 1e-04
Identities = 46/158 (29%), Positives = 58/158 (36%), Gaps = 14/158 (8%)
Query: 6 QPAEEGPSVPKIYKQRSPYSVLKTFPSKRPALAKRY-------ERPTLVELPHVRAPPPP 58
+P+ + P K P + S RP A R PT E P PP
Sbjct: 1171 RPSPKAPQKVKAAIASIPVGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPP 1230
Query: 59 PPPFAPHAAVSISSSEPP-PQQFQAQSSYPPGPGRAAAAASSSSPSCTPAT---SQGHLR 114
PP P + S PP P + ++S A+ SSSS P ++G
Sbjct: 1231 APPPLPETWTPTARSSPPLPPPAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEPP 1290
Query: 115 TPAQPPPA---SPAASSSSSFAAVVRYGPGAAAAAGTG 149
TP P PA +P SS SS P AAGTG
Sbjct: 1291 TPPSPAPAPAVAPGGSSESSSGRAAGDTPERKEAAGTG 1328
Score = 37.7 bits (86), Expect = 0.026
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 5 MQPAEEGPSVPKIYKQRSPYSVLKTFPSKRPA--LAKRYERP------TLVELPHVRAPP 56
+ P++ PSV Q+ + + SK PA A +ERP E P P
Sbjct: 44 LAPSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHERPPGGTGSADPERPPGATCP 103
Query: 57 PPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTP 116
P P PH + S + PP + ++S PPG R + S + ++ P
Sbjct: 104 ESPGPGPPHPLGVVESGKGPPPTTEEEASGPPGEPRLDSETESDHDDAFLSIMSPEIQLP 163
Query: 117 AQP 119
P
Sbjct: 164 LPP 166
Score = 36.2 bits (82), Expect = 0.077
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
P AP P P ++++S PP PP P A A +S PS T +
Sbjct: 1102 PTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKG-PPAPATATPAPTSPFPSATAGSM 1160
Query: 110 QGHLRTPAQPPPASPAASSSSSFAAVVRYGPGAAAAAGTGG 150
L P P+ A + A + G A A+G G
Sbjct: 1161 TYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRPG 1201
Score = 33.5 bits (75), Expect = 0.50
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 51 HVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCT---PA 107
H R P P PP P V+ A S P A+AA S S S T
Sbjct: 505 HCRPPLDPEPPGPPDPPVAFGKGYGSAPSSSASS---PASSSASAATSFSLGSGTFKAQE 561
Query: 108 TSQGHLRTPAQPPPASPAASSSSSFAAVVRYGP 140
+ QG P +PPP P A ++ + R+ P
Sbjct: 562 SGQGSTAGPLRPPP--PGAGGPATPSKATRFLP 592
Score = 33.1 bits (74), Expect = 0.65
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 12/113 (10%)
Query: 50 PHVRAPPPPPPPFAP--HAAVSISSSEPPPQQFQAQSSYPPGPG----RAAAAASSSSPS 103
P PP PP F +A S S+S P A +S+ G G + + S++ P
Sbjct: 512 PEPPGPPDPPVAFGKGYGSAPSSSASSPASSSASAATSFSLGSGTFKAQESGQGSTAGPL 571
Query: 104 CTPATSQGHLRTPAQP------PPASPAASSSSSFAAVVRYGPGAAAAAGTGG 150
P G TP++ PA+ S + GP AA +GG
Sbjct: 572 RPPPPGAGGPATPSKATRFLPMDPATFRRKRPESVGGLEPPGPSVIAAPPSGG 624
Score = 30.8 bits (68), Expect = 3.2
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 77 PQQFQAQSSYPPGPGRAAAAASSSSPSCT------PATS-QGHLRTPAQPPPASPAASSS 129
PQQ Q + P PG AAA S +P+ + P TS G + P P P S
Sbjct: 833 PQQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSV 892
Query: 130 SS 131
S
Sbjct: 893 PS 894
Score = 30.4 bits (67), Expect = 4.2
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
P AP P PPP AA P P A P P + A ++ P P S
Sbjct: 1529 PGAEAPLPVPPPTGTAAA-------PAPTPSPAGGPDPTSPSSDSGTAQAAPPLPPPPES 1581
Query: 110 ---QGHLRTPAQPPPASPAASSSSS 131
Q QP P P S++++
Sbjct: 1582 GPGQPGWEGAPQPSPPPPGPSTAAT 1606
>gi|13699803 WAS protein family, member 3 [Homo sapiens]
Length = 502
Score = 45.1 bits (105), Expect = 2e-04
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 55 PPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLR 114
PPPPPPP P A + S P Q PP P A+A+++ ++P P+T G L
Sbjct: 344 PPPPPPPVIPSAQTAFVSPLQMPMQ-------PPFP--ASASSTHAAPPHPPST--GLLV 392
Query: 115 T----PAQPPPASPAASSSSSFAAVVRYGPGAAAA 145
T P PPP SS ++ +GP A A
Sbjct: 393 TAPPPPGPPPPPPGPPGPGSSLSSSPMHGPPVAEA 427
Score = 42.0 bits (97), Expect = 0.001
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 10/109 (9%)
Query: 31 PSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGP 90
PS + A + P P + PP P + +++ PPP PPGP
Sbjct: 353 PSAQTAFVSPLQMPMQPPFPASASSTHAAPPHPPSTGLLVTA--PPPPGPPPPPPGPPGP 410
Query: 91 GRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSSSSFAAVVRYG 139
G ++ SSSP P ++ + PAQP P + + S A +R G
Sbjct: 411 G----SSLSSSPMHGPPVAEAKRQEPAQP----PISDARSDLLAAIRMG 451
>gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo
sapiens]
Length = 963
Score = 45.1 bits (105), Expect = 2e-04
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 19/194 (9%)
Query: 66 AAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPA 125
+ V+ S +PPPQQ Q Q P P + A A SSSS + A S S +
Sbjct: 23 SGVAQSPQQPPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAAS-------------SSS 69
Query: 126 ASSSSSFAAVVRYGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQC-SRVLSLLNC 184
+S+S+S A V G +A G G G A ++++ + +D + C R+ SL
Sbjct: 70 SSTSTSMAVAVASG---SAPPGGPGPGRTPAPVQMNLYATWEVDRSSSSCVPRLFSLTLK 126
Query: 185 GGKLLD--SNHSQSMISCVKQEGSSYNERQEHCHIGKGVHSQTSDNVDIEMQYMQRKQQT 242
+L S++ VK +GS R + +T + +QY ++
Sbjct: 127 KLVMLKEMDKDLNSVVIAVKLQGSKRILRSNEIVLPASGLVETELQLTFSLQYPHFLKRD 186
Query: 243 SAFLRVFTDSLQNY 256
+ L++ + Y
Sbjct: 187 ANKLQIMLQRRKRY 200
Score = 30.8 bits (68), Expect = 3.2
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 50 PHVRAPPPPPPPFAPHAAVSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATS 109
P + PP P P A + SSS + SS A A AS S+P P
Sbjct: 34 PQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGP--- 90
Query: 110 QGHLRTPA 117
G RTPA
Sbjct: 91 -GPGRTPA 97
Score = 30.4 bits (67), Expect = 4.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 89 GPGRAAAAASSSSPSCTPATSQGHLRTPAQPPPASPAASSS 129
G G + S + PS +P +S G R PP+SP+ SS+
Sbjct: 765 GDGDDSPVVSLTVPSTSPPSSSGLSRDATATPPSSPSMSSA 805
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,239,264
Number of Sequences: 37866
Number of extensions: 1589313
Number of successful extensions: 25767
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 1251
Number of HSP's that attempted gapping in prelim test: 14322
Number of HSP's gapped (non-prelim): 7792
length of query: 534
length of database: 18,247,518
effective HSP length: 107
effective length of query: 427
effective length of database: 14,195,856
effective search space: 6061630512
effective search space used: 6061630512
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.