UBN1 2171

Name: UBN1	Sequence: fasta or formatted (1134aa)		NCBI GI: 118572601
Description: ubinuclein 1		Referenced in: Nucleus and Nucleolus
Other entries for this name: alt mRNA [1134aa] ubinuclein 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 103 4 C cysteine 0.9 10 1 D aspartate 4.3 49 2 E glutamate 7.1 80 3 F phenylalanine 2.9 33 2 G glycine 7.8 89 2 H histidine 2.7 31 2 I isoleucine 2.6 29 2 K lysine 10.6 120 5 L leucine 9.2 104 2 M methionine 1.2 14 1 N asparagine 2.2 25 2 P proline 8.1 92 3 Q glutamine 4.9 55 3 R arginine 3.8 43 2 S serine 12.8 145 5 T threonine 3.4 38 2 V valine 4.8 54 2 W tryptophan 0.4 4 1 Y tyrosine 1.4 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubinuclein 1 UBN1 1.000 ubinuclein 1 UBN2 0.265 ubinuclein 2 MED1 0.021 mediator complex subunit 1 CNOT3 0.019 CCR4-NOT transcription complex, subunit 3 NACA 0.017 nascent polypeptide-associated complex alpha subuni... MUC4 0.017 mucin 4 isoform a DOCK4 0.016 dedicator of cytokinesis 4 LOC100288540 0.014 PREDICTED: hypothetical protein XP_002342775 ATN1 0.014 atrophin-1 ATN1 0.014 atrophin-1 NUP214 0.014 nucleoporin 214kDa MFAP1 0.014 microfibrillar-associated protein 1 FLJ22184 0.014 PREDICTED: hypothetical protein FLJ22184 POM121 0.014 nuclear pore membrane protein 121 SRCAP 0.014 Snf2-related CBP activator protein POM121C 0.014 POM121 membrane glycoprotein (rat)-like FLJ22184 0.013 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.013 PREDICTED: hypothetical protein LOC80164 ASXL2 0.013 additional sex combs like 2 AGAP2 0.013 centaurin, gamma 1 isoform PIKE-L TNRC18 0.013 trinucleotide repeat containing 18 SPTY2D1 0.013 SPT2, Suppressor of Ty, domain containing 1 LOC100133756 0.013 PREDICTED: hypothetical protein, partial LOC100133698 0.013 PREDICTED: hypothetical protein C13orf23 0.013 hypothetical protein LOC80209 isoform 2 C13orf23 0.013 hypothetical protein LOC80209 isoform 1 BOD1L 0.012 biorientation of chromosomes in cell division 1-like... CALD1 0.012 caldesmon 1 isoform 1 ZC3H18 0.012 zinc finger CCCH-type containing 18 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.