Guide to the Human Genome
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Name: NACC2 Sequence: fasta or formatted (587aa) NCBI GI: 21389533
Description:

BTB (POZ) domain containing 14A

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         69           6
 C cysteine            2.2         13           1
 D aspartate           4.1         24           2
 E glutamate           6.3         37           2
 F phenylalanine       2.9         17           2
 G glycine             7.5         44           4
 H histidine           1.5          9           1
 I isoleucine          3.6         21           1
 K lysine              3.2         19           1
 L leucine             8.7         51           2
 M methionine          2.6         15           1
 N asparagine          2.6         15           1
 P proline             9.0         53           2
 Q glutamine           4.8         28           2
 R arginine            5.6         33           2
 S serine              8.0         47           2
 T threonine           4.8         28           2
 V valine              7.3         43           2
 W tryptophan          0.2          1           1
 Y tyrosine            3.4         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BTB (POZ) domain containing 14A 
NACC1                 0.408   transcriptional repressor NAC1 
ZBTB37                0.075   zinc finger and BTB domain containing 37 isoform a ...
ZBTB37                0.075   zinc finger and BTB domain containing 37 isoform b [...
ZBTB34                0.070   zinc finger and BTB domain containing 34 
ZBTB43                0.065   zinc finger and BTB domain containing 43 
ZBTB43                0.065   zinc finger and BTB domain containing 43 
ZBTB22                0.064   zinc finger and BTB domain containing 22 
ZBTB22                0.064   zinc finger and BTB domain containing 22 
ZBTB45                0.056   zinc finger and BTB domain containing 45 
ZBTB20                0.051   zinc finger and BTB domain containing 20 
ZBTB8A                0.047   zinc finger and BTB domain containing 8A 
ZBTB7C                0.047   zinc finger and BTB domain containing 7C 
ZBTB26                0.045   zinc finger and BTB domain containing 26 
ZBTB16                0.044   promyelocytic leukemia zinc finger protein 
ZBTB16                0.044   promyelocytic leukemia zinc finger protein 
ZBTB9                 0.044   zinc finger and BTB domain containing 9 
ZBTB7B                0.043   zinc finger and BTB domain containing 7B 
LOC100293130          0.043   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.043   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.043   PREDICTED: similar to kruppel-related zinc finger p...
BCL6B                 0.043   B-cell CLL/lymphoma 6, member B (zinc finger protein...
ZNF509                0.042   zinc finger protein 509 
ZBTB17                0.041   zinc finger and BTB domain containing 17 
ZBTB7A                0.040   zinc finger and BTB domain containing 7A 
ZBTB6                 0.040   zinc finger and BTB domain containing 6 
ZNF295                0.040   zinc finger protein 295 isoform S 
ZNF295                0.040   zinc finger protein 295 isoform L 
ZNF295                0.040   zinc finger protein 295 isoform L 
ZBTB46                0.040   zinc finger and BTB domain containing 46 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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