Guide to the Human Genome
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Name: BEND4 Sequence: fasta or formatted (441aa) NCBI GI: 228008410
Description:

BEN domain containing 4 isoform b

Referenced in:

Coiled-Coil Proteins

Other entries for this name:
alt prot [534aa] BEN domain containing 4 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         35           5
 C cysteine            2.0          9           1
 D aspartate           3.2         14           1
 E glutamate           7.7         34           6
 F phenylalanine       2.3         10           1
 G glycine             5.7         25           2
 H histidine           3.2         14           2
 I isoleucine          2.7         12           1
 K lysine              4.1         18           2
 L leucine             8.4         37           2
 M methionine          1.6          7           1
 N asparagine          2.5         11           2
 P proline            10.2         45           7
 Q glutamine           6.8         30           2
 R arginine            5.0         22           2
 S serine             13.4         59           5
 T threonine           4.8         21           2
 V valine              4.8         21           2
 W tryptophan          0.5          2           1
 Y tyrosine            3.4         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BEN domain containing 4 isoform b 
BEND4                 0.995   BEN domain containing 4 isoform a 
SAMD1                 0.029   sterile alpha motif domain containing 1 
KIAA1522              0.028   hypothetical protein LOC57648 
SFPQ                  0.028   splicing factor proline/glutamine rich (polypyrimidin...
TAF4                  0.026   TBP-associated factor 4 
WASL                  0.026   Wiskott-Aldrich syndrome gene-like protein 
UBN1                  0.025   ubinuclein 1 
UBN1                  0.025   ubinuclein 1 
PCLO                  0.025   piccolo isoform 2 
PCLO                  0.025   piccolo isoform 1 
KIAA0754              0.025   hypothetical protein LOC643314 
CASKIN1               0.024   CASK interacting protein 1 
TAF6                  0.024   TBP-associated factor 6 isoform gamma 
TAF6                  0.024   TBP-associated factor 6 isoform delta 
TAF6                  0.024   TBP-associated factor 6 isoform alpha 
TAF6                  0.024   TBP-associated factor 6 isoform alpha 
FOXC1                 0.024   forkhead box C1 
MBD6                  0.024   methyl-CpG binding domain protein 6 
MAZ                   0.023   MYC-associated zinc finger protein isoform 2 
MAZ                   0.023   MYC-associated zinc finger protein isoform 1 
FLJ22184              0.023   PREDICTED: hypothetical protein FLJ22184 
EIF3F                 0.023   eukaryotic translation initiation factor 3, subunit 5...
WIPF1                 0.023   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.023   WAS/WASL interacting protein family, member 1 
GRIN2D                0.023   N-methyl-D-aspartate receptor subunit 2D precursor ...
CIC                   0.023   capicua homolog 
WASF3                 0.023   WAS protein family, member 3 
PACS1                 0.023   phosphofurin acidic cluster sorting protein 1 
WIPF2                 0.023   WIRE protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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