USP53 4494

Name: USP53	Sequence: fasta or formatted (1073aa)		NCBI GI: 148539600
Description: ubiquitin specific protease 53		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 48 2 C cysteine 3.2 34 1 D aspartate 5.5 59 2 E glutamate 6.9 74 1 F phenylalanine 4.1 44 2 G glycine 5.4 58 2 H histidine 4.2 45 2 I isoleucine 4.3 46 2 K lysine 7.4 79 2 L leucine 7.5 81 3 M methionine 1.9 20 1 N asparagine 5.8 62 2 P proline 5.1 55 3 Q glutamine 4.9 53 3 R arginine 5.1 55 2 S serine 11.8 127 4 T threonine 4.9 53 2 V valine 4.5 48 2 W tryptophan 1.0 11 1 Y tyrosine 2.0 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific protease 53 USP54 0.227 ubiquitin specific peptidase 54 DSPP 0.011 dentin sialophosphoprotein preproprotein AFF4 0.008 ALL1 fused gene from 5q31 FLG 0.008 filaggrin ZRANB2 0.008 zinc finger protein 265 isoform 2 ZRANB2 0.007 zinc finger protein 265 isoform 1 IWS1 0.007 IWS1 homolog LOC100170229 0.006 hypothetical protein LOC100170229 MLL 0.006 myeloid/lymphoid or mixed-lineage leukemia protein [... USP35 0.006 ubiquitin specific protease 35 PNN 0.006 pinin, desmosome associated protein MED1 0.006 mediator complex subunit 1 SFRS4 0.005 splicing factor, arginine/serine-rich 4 NAV2 0.005 neuron navigator 2 isoform 4 NAV2 0.005 neuron navigator 2 isoform 3 NAV2 0.005 neuron navigator 2 isoform 2 USP41 0.005 PREDICTED: ubiquitin specific protease 41 USP18 0.005 ubiquitin specific protease 18 GPATCH8 0.005 G patch domain containing 8 USP41 0.005 PREDICTED: ubiquitin specific peptidase 41 USP22 0.005 ubiquitin thiolesterase 22 BOD1L 0.005 biorientation of chromosomes in cell division 1-like... YEATS2 0.005 YEATS domain containing 2 USP27X 0.005 X-linked ubiquitin thioesterase 27 USP41 0.005 PREDICTED: ubiquitin specific peptidase 41 DST 0.005 dystonin isoform 4 DST 0.005 dystonin isoform 3 DST 0.005 dystonin isoform 2 DST 0.005 dystonin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.