USP54 2683

Name: USP54	Sequence: fasta or formatted (1684aa)		NCBI GI: 124001558
Description: ubiquitin specific peptidase 54		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 85 3 C cysteine 2.4 41 1 D aspartate 5.1 86 3 E glutamate 6.5 110 2 F phenylalanine 3.1 53 3 G glycine 6.2 104 2 H histidine 4.0 67 2 I isoleucine 3.0 51 2 K lysine 4.6 77 2 L leucine 8.3 140 4 M methionine 1.8 31 1 N asparagine 2.7 45 1 P proline 7.4 125 2 Q glutamine 6.2 105 4 R arginine 6.7 112 2 S serine 14.6 246 5 T threonine 5.2 88 2 V valine 3.6 60 2 W tryptophan 1.5 25 1 Y tyrosine 2.0 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific peptidase 54 USP53 0.145 ubiquitin specific protease 53 FLG 0.010 filaggrin RBBP6 0.008 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.008 retinoblastoma-binding protein 6 isoform 1 DSPP 0.006 dentin sialophosphoprotein preproprotein C2orf16 0.005 hypothetical protein LOC84226 CYLC1 0.005 cylicin, basic protein of sperm head cytoskeleton 1... FNDC1 0.005 fibronectin type III domain containing 1 BAZ2A 0.005 bromodomain adjacent to zinc finger domain, 2A [Homo... N4BP3 0.005 Nedd4 binding protein 3 GIGYF2 0.004 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.004 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.004 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.004 GRB10 interacting GYF protein 2 isoform b QRICH1 0.004 glutamine-rich 1 QRICH1 0.004 glutamine-rich 1 NOLC1 0.004 nucleolar and coiled-body phosphoprotein 1 SORBS2 0.004 sorbin and SH3 domain containing 2 isoform 6 FLG2 0.004 filaggrin family member 2 AFF1 0.004 myeloid/lymphoid or mixed-lineage leukemia trithorax ... ATF7IP 0.004 activating transcription factor 7 interacting protei... MED15 0.004 mediator complex subunit 15 isoform b C1orf106 0.004 hypothetical protein LOC55765 isoform 2 C1orf106 0.004 hypothetical protein LOC55765 isoform 1 BSN 0.004 bassoon protein FAM48A 0.004 family with sequence similarity 48, member A isoform... CCDC86 0.004 coiled-coil domain containing 86 SFRS11 0.004 splicing factor, arginine/serine-rich 11 NIPBL 0.004 delangin isoform B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.