Guide to the Human Genome
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Name: USP27X Sequence: fasta or formatted (438aa) NCBI GI: 223005906
Description:

X-linked ubiquitin thioesterase 27

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         20           2
 C cysteine            4.3         19           1
 D aspartate           4.8         21           2
 E glutamate           6.4         28           2
 F phenylalanine       4.3         19           2
 G glycine             5.7         25           2
 H histidine           5.3         23           2
 I isoleucine          5.0         22           2
 K lysine              5.7         25           1
 L leucine             9.4         41           2
 M methionine          2.3         10           1
 N asparagine          4.1         18           2
 P proline             4.8         21           1
 Q glutamine           4.8         21           2
 R arginine            4.8         21           4
 S serine              8.7         38           2
 T threonine           6.6         29           2
 V valine              4.6         20           2
 W tryptophan          1.1          5           1
 Y tyrosine            2.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   X-linked ubiquitin thioesterase 27 
USP22                 0.795   ubiquitin thiolesterase 22 
USP51                 0.698   ubiquitin specific protease 51 
USP3                  0.172   ubiquitin thiolesterase 3 
USP2                  0.162   ubiquitin specific peptidase 2 isoform a 
USP2                  0.156   ubiquitin specific peptidase 2 isoform b 
LOC100287238          0.149   PREDICTED: hypothetical protein XP_002342474 
USP8                  0.148   ubiquitin specific peptidase 8 
USP8                  0.148   ubiquitin specific peptidase 8 
USP8                  0.148   ubiquitin specific peptidase 8 
LOC728379             0.146   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC100287404          0.146   PREDICTED: hypothetical protein XP_002342477 
LOC100287364          0.146   PREDICTED: hypothetical protein XP_002342476 
LOC100287178          0.146   PREDICTED: hypothetical protein XP_002342472 
LOC100287327          0.146   PREDICTED: hypothetical protein XP_002342475 
DUB3                  0.144   deubiquitinating enzyme 3 
LOC728373             0.144   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC100287513          0.144   PREDICTED: hypothetical protein XP_002342480 
LOC728419             0.143   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728405             0.143   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728400             0.143   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728393             0.143   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
USP17L5               0.143   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
LOC728379             0.143   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728373             0.143   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728369             0.143   PREDICTED: similar to deubiquitinating enzyme 3 [Ho...
LOC100287441          0.143   PREDICTED: hypothetical protein XP_002342478 
LOC100287478          0.142   PREDICTED: hypothetical protein XP_002342479 
LOC100288520          0.142   PREDICTED: hypothetical protein XP_002342486 
LOC100287205          0.142   PREDICTED: hypothetical protein XP_002342473 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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