Guide to the Human Genome
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Name: TBC1D26 Sequence: fasta or formatted (250aa) NCBI GI: 148235002
Description:

TBC1 domain family, member 26

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         15           2
 C cysteine            2.0          5           2
 D aspartate           4.4         11           1
 E glutamate           5.2         13           2
 F phenylalanine       1.2          3           1
 G glycine             6.0         15           1
 H histidine           3.2          8           1
 I isoleucine          6.0         15           3
 K lysine              7.6         19           2
 L leucine            10.0         25           3
 M methionine          2.8          7           2
 N asparagine          2.8          7           2
 P proline             3.6          9           1
 Q glutamine           6.4         16           2
 R arginine            8.8         22           2
 S serine              7.6         19           2
 T threonine           4.4         11           1
 V valine              5.6         14           1
 W tryptophan          2.0          5           1
 Y tyrosine            4.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TBC1 domain family, member 26 
LOC100292664          0.690   PREDICTED: similar to TBC1 domain family, member 28...
TBC1D28               0.680   TBC1 domain family, member 28 
USP6                  0.446   ubiquitin specific protease 6 
TBC1D3C               0.440   TBC1 domain family member 3C 
TBC1D3G               0.440   TBC1 domain family, member 3G 
TBC1D3                0.436   TBC1 domain family, member 3 
TBC1D3E               0.436   TBC1 domain family, member 3E 
TBC1D3D               0.436   TBC1 domain family, member 3D 
TBC1D3H               0.436   TBC1 domain family, member 3H 
TBC1D3B               0.436   TBC1 domain family, member 3B 
TBC1D3F               0.430   TBC1 domain family, member 3F 
USP6NL                0.316   USP6 N-terminal like isoform 1 
USP6NL                0.316   USP6 N-terminal like isoform 2 
LOC100134348          0.256   PREDICTED: similar to TBC1 domain family, member 3 ...
TBC1D10A              0.140   TBC1 domain family, member 10A 
TBC1D10B              0.138   TBC1 domain family, member 10B 
TBC1D10C              0.126   TBC1 domain family, member 10C 
TBC1D9                0.095   TBC1 domain family, member 9 (with GRAM domain) [Ho...
TBC1D1                0.091   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
TBC1D12               0.087   TBC1 domain family, member 12 
TBC1D8                0.085   TBC1 domain family, member 8 
TBC1D8B               0.083   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D8B               0.083   TBC1 domain family, member 8B (with GRAM domain) iso...
RABGAP1               0.083   RAB GTPase activating protein 1 
GRTP1                 0.083   growth hormone regulated TBC protein 1 
TBC1D14               0.076   TBC1 domain family, member 14 isoform b 
TBC1D14               0.076   TBC1 domain family, member 14 isoform a 
TBC1D14               0.076   TBC1 domain family, member 14 isoform a 
TBC1D9B               0.076   TBC1 domain family, member 9B (with GRAM domain) iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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