TBC1D8 5919

Name: TBC1D8	Sequence: fasta or formatted (1140aa)		NCBI GI: 156231067
Description: TBC1 domain family, member 8		Referenced in: Rab
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 70 2 C cysteine 2.2 25 3 D aspartate 6.3 72 3 E glutamate 8.7 99 3 F phenylalanine 5.2 59 2 G glycine 3.9 44 3 H histidine 3.1 35 2 I isoleucine 4.6 52 2 K lysine 5.3 60 1 L leucine 11.8 135 3 M methionine 2.5 29 2 N asparagine 3.2 37 1 P proline 4.6 52 2 Q glutamine 4.6 53 2 R arginine 5.9 67 3 S serine 8.2 93 3 T threonine 4.1 47 2 V valine 5.9 67 2 W tryptophan 1.3 15 1 Y tyrosine 2.5 29 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TBC1 domain family, member 8 TBC1D8B 0.499 TBC1 domain family, member 8B (with GRAM domain) iso... TBC1D9B 0.470 TBC1 domain family, member 9B (with GRAM domain) iso... TBC1D9 0.470 TBC1 domain family, member 9 (with GRAM domain) [Ho... TBC1D9B 0.469 TBC1 domain family, member 9B (with GRAM domain) iso... TBC1D8B 0.302 TBC1 domain family, member 8B (with GRAM domain) iso... SGSM3 0.058 small G protein signaling modulator 3 GRTP1 0.055 growth hormone regulated TBC protein 1 TBC1D2B 0.053 TBC1 domain family, member 2B isoform b TBC1D2B 0.053 TBC1 domain family, member 2B isoform a TBC1D10A 0.045 TBC1 domain family, member 10A TBC1D10C 0.044 TBC1 domain family, member 10C TBC1D10B 0.041 TBC1 domain family, member 10B TBC1D2 0.041 TBC1 domain family, member 2 RABGAP1L 0.038 RAB GTPase activating protein 1-like isoform A [Homo... EVI5L 0.038 ecotropic viral integration site 5-like isoform 1 [... EVI5L 0.038 ecotropic viral integration site 5-like isoform 2 [H... RABGAP1 0.037 RAB GTPase activating protein 1 EVI5 0.035 ecotropic viral integration site 5 TBC1D30 0.032 PREDICTED: TBC1 domain family, member 30 TBC1D30 0.032 PREDICTED: TBC1 domain family, member 30 TBC1D30 0.032 PREDICTED: TBC1 domain family, member 30 USP6NL 0.031 USP6 N-terminal like isoform 1 USP6NL 0.031 USP6 N-terminal like isoform 2 TBC1D1 0.029 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member... TBC1D4 0.023 TBC1 domain family, member 4 TBC1D3F 0.021 TBC1 domain family, member 3F USP6 0.021 ubiquitin specific protease 6 TBC1D3H 0.021 TBC1 domain family, member 3H TBC1D3G 0.021 TBC1 domain family, member 3G Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.