Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TBC1D14 Sequence: fasta or formatted (413aa) NCBI GI: 164565381
Description:

TBC1 domain family, member 14 isoform b

Referenced in:

Rab

Other entries for this name:
alt prot [693aa] TBC1 domain family, member 14 isoform a
alt prot [693aa] TBC1 domain family, member 14 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         34           2
 C cysteine            1.9          8           1
 D aspartate           5.3         22           1
 E glutamate           8.5         35           2
 F phenylalanine       5.8         24           2
 G glycine             4.1         17           2
 H histidine           1.9          8           1
 I isoleucine          5.6         23           1
 K lysine              6.3         26           2
 L leucine            11.6         48           2
 M methionine          2.7         11           1
 N asparagine          4.4         18           2
 P proline             5.1         21           2
 Q glutamine           4.1         17           2
 R arginine            6.3         26           2
 S serine              5.6         23           1
 T threonine           4.1         17           2
 V valine              3.9         16           2
 W tryptophan          2.4         10           2
 Y tyrosine            2.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TBC1 domain family, member 14 isoform b 
TBC1D14               0.998   TBC1 domain family, member 14 isoform a 
TBC1D14               0.998   TBC1 domain family, member 14 isoform a 
TBC1D12               0.725   TBC1 domain family, member 12 
EVI5                  0.100   ecotropic viral integration site 5 
RABGAP1               0.100   RAB GTPase activating protein 1 
RABGAP1L              0.099   RAB GTPase activating protein 1-like isoform A [Homo...
USP6NL                0.097   USP6 N-terminal like isoform 1 
USP6NL                0.097   USP6 N-terminal like isoform 2 
EVI5L                 0.095   ecotropic viral integration site 5-like isoform 1 [...
EVI5L                 0.095   ecotropic viral integration site 5-like isoform 2 [H...
TBC1D4                0.090   TBC1 domain family, member 4 
TBC1D10A              0.086   TBC1 domain family, member 10A 
TBC1D10B              0.082   TBC1 domain family, member 10B 
TBC1D1                0.078   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
TBC1D10C              0.076   TBC1 domain family, member 10C 
SGSM3                 0.075   small G protein signaling modulator 3 
TBC1D2B               0.071   TBC1 domain family, member 2B isoform a 
TBC1D2B               0.071   TBC1 domain family, member 2B isoform b 
TBC1D3H               0.064   TBC1 domain family, member 3H 
TBC1D3G               0.064   TBC1 domain family, member 3G 
TBC1D3                0.064   TBC1 domain family, member 3 
TBC1D3E               0.064   TBC1 domain family, member 3E 
TBC1D3D               0.064   TBC1 domain family, member 3D 
TBC1D3F               0.064   TBC1 domain family, member 3F 
TBC1D3C               0.060   TBC1 domain family member 3C 
TBC1D8B               0.059   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D3B               0.059   TBC1 domain family, member 3B 
USP6                  0.057   ubiquitin specific protease 6 
TBC1D2                0.051   TBC1 domain family, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press