Guide to the Human Genome
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Name: TBC1D14 Sequence: fasta or formatted (693aa) NCBI GI: 164565366
Description:

TBC1 domain family, member 14 isoform a

Referenced in:

Rab

Other entries for this name:
alt mRNA [693aa] TBC1 domain family, member 14 isoform a
alt prot [413aa] TBC1 domain family, member 14 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         52           2
 C cysteine            1.9         13           1
 D aspartate           5.8         40           3
 E glutamate           7.2         50           2
 F phenylalanine       4.6         32           2
 G glycine             4.6         32           2
 H histidine           2.0         14           1
 I isoleucine          4.6         32           1
 K lysine              6.3         44           2
 L leucine            11.5         80           2
 M methionine          1.7         12           1
 N asparagine          4.3         30           2
 P proline             5.8         40           2
 Q glutamine           4.2         29           2
 R arginine            6.2         43           2
 S serine              8.7         60           4
 T threonine           4.9         34           2
 V valine              4.8         33           2
 W tryptophan          1.6         11           2
 Y tyrosine            1.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TBC1 domain family, member 14 isoform a 
TBC1D14               1.000   TBC1 domain family, member 14 isoform a 
TBC1D14               0.596   TBC1 domain family, member 14 isoform b 
TBC1D12               0.466   TBC1 domain family, member 12 
EVI5                  0.060   ecotropic viral integration site 5 
RABGAP1               0.060   RAB GTPase activating protein 1 
RABGAP1L              0.059   RAB GTPase activating protein 1-like isoform A [Homo...
USP6NL                0.058   USP6 N-terminal like isoform 1 
USP6NL                0.058   USP6 N-terminal like isoform 2 
EVI5L                 0.057   ecotropic viral integration site 5-like isoform 1 [...
EVI5L                 0.057   ecotropic viral integration site 5-like isoform 2 [H...
TBC1D4                0.054   TBC1 domain family, member 4 
TBC1D10A              0.051   TBC1 domain family, member 10A 
TBC1D10B              0.049   TBC1 domain family, member 10B 
TBC1D1                0.047   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
TBC1D10C              0.045   TBC1 domain family, member 10C 
SGSM3                 0.045   small G protein signaling modulator 3 
TBC1D2B               0.042   TBC1 domain family, member 2B isoform a 
TBC1D2B               0.042   TBC1 domain family, member 2B isoform b 
TBC1D3H               0.038   TBC1 domain family, member 3H 
TBC1D3G               0.038   TBC1 domain family, member 3G 
TBC1D3                0.038   TBC1 domain family, member 3 
TBC1D3E               0.038   TBC1 domain family, member 3E 
TBC1D3D               0.038   TBC1 domain family, member 3D 
TBC1D3F               0.038   TBC1 domain family, member 3F 
TBC1D3C               0.036   TBC1 domain family member 3C 
TBC1D8B               0.035   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D3B               0.035   TBC1 domain family, member 3B 
USP6                  0.034   ubiquitin specific protease 6 
TBC1D2                0.031   TBC1 domain family, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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