LOC100134348 23013

Name: LOC100134348	Sequence: fasta or formatted (424aa)		NCBI GI: 239756926
Description: PREDICTED: similar to TBC1 domain family, member 3		Referenced in: Rab
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 27 1 C cysteine 2.1 9 1 D aspartate 5.9 25 3 E glutamate 5.0 21 2 F phenylalanine 3.3 14 2 G glycine 8.3 35 2 H histidine 1.9 8 1 I isoleucine 3.8 16 2 K lysine 5.9 25 2 L leucine 5.9 25 2 M methionine 2.4 10 1 N asparagine 2.4 10 3 P proline 10.6 45 3 Q glutamine 5.4 23 2 R arginine 9.4 40 2 S serine 7.5 32 2 T threonine 4.2 18 1 V valine 4.0 17 2 W tryptophan 3.8 16 2 Y tyrosine 1.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TBC1 domain family, member 3 ... TBC1D3H 0.532 TBC1 domain family, member 3H TBC1D3D 0.532 TBC1 domain family, member 3D TBC1D3C 0.532 TBC1 domain family member 3C TBC1D3G 0.532 TBC1 domain family, member 3G TBC1D3F 0.531 TBC1 domain family, member 3F TBC1D3 0.531 TBC1 domain family, member 3 TBC1D3E 0.531 TBC1 domain family, member 3E TBC1D3B 0.527 TBC1 domain family, member 3B USP6 0.347 ubiquitin specific protease 6 LOC100287742 0.174 PREDICTED: hypothetical protein XP_002343595 LOC100293000 0.172 PREDICTED: similar to hCG1991532 LOC100290964 0.140 PREDICTED: hypothetical protein XP_002347802 TBC1D26 0.140 TBC1 domain family, member 26 LOC100292664 0.130 PREDICTED: similar to TBC1 domain family, member 28... TBC1D28 0.130 TBC1 domain family, member 28 USP6NL 0.109 USP6 N-terminal like isoform 1 USP6NL 0.109 USP6 N-terminal like isoform 2 PDCD6IP 0.025 programmed cell death 6 interacting protein isoform... PDCD6IP 0.025 programmed cell death 6 interacting protein isoform ... TBC1D27 0.025 PREDICTED: TBC1 domain family, member 27 TBC1D27 0.024 PREDICTED: TBC1 domain family, member 27 TBC1D10B 0.024 TBC1 domain family, member 10B TBC1D27 0.023 PREDICTED: TBC1 domain family, member 27 TBC1D10A 0.021 TBC1 domain family, member 10A WASL 0.019 Wiskott-Aldrich syndrome gene-like protein PELP1 0.018 proline, glutamic acid and leucine rich protein 1 [... COL6A6 0.017 collagen type VI alpha 6 SPEG 0.016 SPEG complex locus TBC1D10C 0.016 TBC1 domain family, member 10C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.