USP6 471

Name: USP6	Sequence: fasta or formatted (1406aa)		NCBI GI: 109638751
Description: ubiquitin specific protease 6		Referenced in: Rab Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 74 2 C cysteine 2.8 39 1 D aspartate 5.9 83 2 E glutamate 5.8 81 3 F phenylalanine 3.3 47 2 G glycine 6.8 95 2 H histidine 3.0 42 2 I isoleucine 4.6 65 2 K lysine 6.1 86 2 L leucine 9.5 133 2 M methionine 2.4 34 2 N asparagine 3.9 55 1 P proline 6.8 96 3 Q glutamine 5.2 73 3 R arginine 5.8 82 2 S serine 8.8 124 3 T threonine 4.6 65 2 V valine 4.3 61 2 W tryptophan 1.8 26 1 Y tyrosine 3.2 45 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific protease 6 USP32 0.597 ubiquitin specific protease 32 TBC1D3D 0.284 TBC1 domain family, member 3D TBC1D3G 0.283 TBC1 domain family, member 3G TBC1D3 0.283 TBC1 domain family, member 3 TBC1D3E 0.283 TBC1 domain family, member 3E TBC1D3H 0.283 TBC1 domain family, member 3H TBC1D3C 0.282 TBC1 domain family member 3C TBC1D3F 0.282 TBC1 domain family, member 3F TBC1D3B 0.282 TBC1 domain family, member 3B LOC100134348 0.106 PREDICTED: similar to TBC1 domain family, member 3 ... USP15 0.083 ubiquitin specific peptidase 15 USP6NL 0.083 USP6 N-terminal like isoform 1 USP6NL 0.083 USP6 N-terminal like isoform 2 USP4 0.082 ubiquitin specific protease 4 isoform b USP4 0.080 ubiquitin specific protease 4 isoform a USP11 0.078 ubiquitin specific peptidase 11 TBC1D26 0.075 TBC1 domain family, member 26 USP19 0.060 ubiquitin thioesterase 19 LOC100294407 0.058 PREDICTED: similar to hCG2039376 LOC100287742 0.056 PREDICTED: hypothetical protein XP_002343595 LOC100293000 0.054 PREDICTED: similar to hCG1991532 TBC1D28 0.053 TBC1 domain family, member 28 LOC100292664 0.051 PREDICTED: similar to TBC1 domain family, member 28... USP8 0.049 ubiquitin specific peptidase 8 USP8 0.049 ubiquitin specific peptidase 8 USP8 0.049 ubiquitin specific peptidase 8 USP2 0.044 ubiquitin specific peptidase 2 isoform a USP2 0.044 ubiquitin specific peptidase 2 isoform b LOC100290964 0.043 PREDICTED: hypothetical protein XP_002347802 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.