LOC100292664 22941

Name: LOC100292664	Sequence: fasta or formatted (234aa)		NCBI GI: 239756750
Description: PREDICTED: similar to TBC1 domain family, member 28		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 13 2 C cysteine 2.6 6 1 D aspartate 3.8 9 1 E glutamate 4.3 10 1 F phenylalanine 0.9 2 1 G glycine 7.3 17 2 H histidine 3.0 7 1 I isoleucine 6.0 14 3 K lysine 8.5 20 2 L leucine 8.1 19 3 M methionine 3.4 8 2 N asparagine 3.0 7 2 P proline 4.7 11 1 Q glutamine 7.3 17 2 R arginine 6.8 16 2 S serine 8.1 19 2 T threonine 3.4 8 1 V valine 7.3 17 1 W tryptophan 1.7 4 1 Y tyrosine 4.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TBC1 domain family, member 28... TBC1D28 0.870 TBC1 domain family, member 28 TBC1D26 0.736 TBC1 domain family, member 26 USP6 0.324 ubiquitin specific protease 6 TBC1D3B 0.322 TBC1 domain family, member 3B TBC1D3C 0.322 TBC1 domain family member 3C TBC1D3G 0.322 TBC1 domain family, member 3G TBC1D3 0.317 TBC1 domain family, member 3 TBC1D3E 0.317 TBC1 domain family, member 3E TBC1D3D 0.317 TBC1 domain family, member 3D TBC1D3H 0.317 TBC1 domain family, member 3H TBC1D3F 0.311 TBC1 domain family, member 3F LOC100134348 0.253 PREDICTED: similar to TBC1 domain family, member 3 ... USP6NL 0.222 USP6 N-terminal like isoform 1 USP6NL 0.222 USP6 N-terminal like isoform 2 TBC1D10B 0.077 TBC1 domain family, member 10B TBC1D10A 0.077 TBC1 domain family, member 10A TBC1D10C 0.059 TBC1 domain family, member 10C TBC1D27 0.057 PREDICTED: TBC1 domain family, member 27 TBC1D27 0.053 PREDICTED: TBC1 domain family, member 27 TBC1D27 0.053 PREDICTED: TBC1 domain family, member 27 GRTP1 0.037 growth hormone regulated TBC protein 1 TBC1D1 0.033 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member... TBC1D9 0.031 TBC1 domain family, member 9 (with GRAM domain) [Ho... TBC1D8 0.022 TBC1 domain family, member 8 LRRC27 0.020 leucine rich repeat containing 27 isoform a LRRC27 0.020 leucine rich repeat containing 27 isoform a TBC1D12 0.020 TBC1 domain family, member 12 TBC1D8B 0.018 TBC1 domain family, member 8B (with GRAM domain) iso... TBC1D8B 0.018 TBC1 domain family, member 8B (with GRAM domain) iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.