USP6NL 35840

Name: USP6NL	Sequence: fasta or formatted (828aa)		NCBI GI: 7661864
Description: USP6 N-terminal like isoform 1		Referenced in: Rab
Other entries for this name: alt prot [845aa] USP6 N-terminal like isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 57 3 C cysteine 0.4 3 1 D aspartate 4.7 39 2 E glutamate 7.4 61 3 F phenylalanine 4.1 34 3 G glycine 5.7 47 2 H histidine 3.7 31 2 I isoleucine 2.9 24 2 K lysine 6.9 57 2 L leucine 8.5 70 3 M methionine 1.8 15 1 N asparagine 3.3 27 1 P proline 8.7 72 4 Q glutamine 4.5 37 2 R arginine 6.8 56 2 S serine 9.4 78 3 T threonine 4.0 33 2 V valine 5.0 41 1 W tryptophan 1.3 11 1 Y tyrosine 4.2 35 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 USP6 N-terminal like isoform 1 USP6NL 0.998 USP6 N-terminal like isoform 2 USP6 0.143 ubiquitin specific protease 6 TBC1D3 0.132 TBC1 domain family, member 3 TBC1D3E 0.132 TBC1 domain family, member 3E TBC1D3C 0.131 TBC1 domain family member 3C TBC1D3D 0.131 TBC1 domain family, member 3D TBC1D3F 0.131 TBC1 domain family, member 3F TBC1D3B 0.131 TBC1 domain family, member 3B TBC1D3H 0.131 TBC1 domain family, member 3H TBC1D3G 0.130 TBC1 domain family, member 3G TBC1D26 0.091 TBC1 domain family, member 26 EVI5 0.075 ecotropic viral integration site 5 EVI5L 0.073 ecotropic viral integration site 5-like isoform 1 [... EVI5L 0.073 ecotropic viral integration site 5-like isoform 2 [H... TBC1D10B 0.070 TBC1 domain family, member 10B TBC1D10A 0.066 TBC1 domain family, member 10A TBC1D28 0.061 TBC1 domain family, member 28 LOC100292664 0.060 PREDICTED: similar to TBC1 domain family, member 28... TBC1D10C 0.060 TBC1 domain family, member 10C TBC1D27 0.060 PREDICTED: TBC1 domain family, member 27 TBC1D27 0.060 PREDICTED: TBC1 domain family, member 27 RABGAP1 0.060 RAB GTPase activating protein 1 TBC1D27 0.058 PREDICTED: TBC1 domain family, member 27 TBC1D1 0.058 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member... LOC100134348 0.057 PREDICTED: similar to TBC1 domain family, member 3 ... RABGAP1L 0.054 RAB GTPase activating protein 1-like isoform A [Homo... TBC1D12 0.051 TBC1 domain family, member 12 TBC1D4 0.051 TBC1 domain family, member 4 GRTP1 0.049 growth hormone regulated TBC protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.