BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|148226288 lipocalin-like 1 [Homo sapiens] (164 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|148226288 lipocalin-like 1 [Homo sapiens] 350 2e-97 gi|42714611 lipocalin 15 [Homo sapiens] 58 4e-09 gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens] 38 0.004 gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho... 38 0.004 gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho... 38 0.004 gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho... 38 0.004 gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho... 38 0.004 gi|7657405 odorant binding protein 2A precursor [Homo sapiens] 33 0.14 gi|48717447 lipocalin 9 [Homo sapiens] 32 0.25 gi|225690502 junctophilin 4 [Homo sapiens] 32 0.25 gi|225690500 junctophilin 4 [Homo sapiens] 32 0.25 gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase... 31 0.55 gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 30 0.72 gi|167830477 milk fat globule-EGF factor 8 protein isoform b [Ho... 30 1.2 gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Ho... 30 1.2 gi|15718767 TRAAK [Homo sapiens] 30 1.2 gi|32479527 potassium voltage-gated channel, KQT-like subfamily,... 29 1.6 gi|239757644 PREDICTED: hypothetical protein [Homo sapiens] 29 1.6 gi|111955326 MLX interacting protein [Homo sapiens] 29 1.6 gi|39573716 lipocalin 6 [Homo sapiens] 29 1.6 gi|4502119 amine oxidase, copper containing 3 precursor [Homo sa... 29 2.1 gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 29 2.1 gi|169212010 PREDICTED: hypothetical protein [Homo sapiens] 28 2.7 gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sap... 28 2.7 gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... 28 2.7 gi|166197660 complement component 8, gamma polypeptide [Homo sap... 28 3.6 gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 28 3.6 gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 28 4.6 gi|145309320 forkhead box Q1 [Homo sapiens] 28 4.6 gi|124249376 proline rich 21 [Homo sapiens] 28 4.6 >gi|148226288 lipocalin-like 1 [Homo sapiens] Length = 164 Score = 350 bits (899), Expect = 2e-97 Identities = 164/164 (100%), Positives = 164/164 (100%) Query: 1 MVGVVSDDQDFLDSKDTMKMAVVLVTPLGNGDLALKFGYPTPHGGCQKMDTTFTEGAVPG 60 MVGVVSDDQDFLDSKDTMKMAVVLVTPLGNGDLALKFGYPTPHGGCQKMDTTFTEGAVPG Sbjct: 1 MVGVVSDDQDFLDSKDTMKMAVVLVTPLGNGDLALKFGYPTPHGGCQKMDTTFTEGAVPG 60 Query: 61 QFSNPAMALSDIRVAFSDYQHFALLYLEMRKGGLRNQWLQLYGGRAAGRRPRHPRFGSGM 120 QFSNPAMALSDIRVAFSDYQHFALLYLEMRKGGLRNQWLQLYGGRAAGRRPRHPRFGSGM Sbjct: 61 QFSNPAMALSDIRVAFSDYQHFALLYLEMRKGGLRNQWLQLYGGRAAGRRPRHPRFGSGM 120 Query: 121 SPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAPSL 164 SPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAPSL Sbjct: 121 SPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAPSL 164 >gi|42714611 lipocalin 15 [Homo sapiens] Length = 184 Score = 57.8 bits (138), Expect = 4e-09 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 1/102 (0%) Query: 1 MVGVVSDDQDFLDSKDTMKMAVVLVTPLGNGDLALKFGYPTPHGGCQKMDTTFTEGAVPG 60 +V + SD + FL KD + M+ + P G L + +P G C ++D + + G Sbjct: 39 VVSMASDCRVFLGKKDHLSMSTRAIRPTEEGGLHVHMEFPGADG-CNQVDAEYLKVGSEG 97 Query: 61 QFSNPAMALSDIRVAFSDYQHFALLYLEMRKGGLRNQWLQLY 102 F PA+ D+R+ +DY FA+LY+ G + +QLY Sbjct: 98 HFRVPALGYLDVRIVDTDYSSFAVLYIYKELEGALSTMVQLY 139 >gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens] Length = 237 Score = 37.7 bits (86), Expect = 0.004 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 108 GRRPRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAP 162 G PR P G P+ L P H GG WC PP PS P PPAP Sbjct: 59 GSAPRSPAPREGPPPV-LASPAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAP 112 >gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo sapiens] Length = 220 Score = 37.7 bits (86), Expect = 0.004 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 108 GRRPRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAP 162 G PR P G P+ L P H GG WC PP PS P PPAP Sbjct: 42 GSAPRSPAPREGPPPV-LASPAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAP 95 >gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo sapiens] Length = 228 Score = 37.7 bits (86), Expect = 0.004 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 108 GRRPRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAP 162 G PR P G P+ L P H GG WC PP PS P PPAP Sbjct: 50 GSAPRSPAPREGPPPV-LASPAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAP 103 >gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo sapiens] Length = 220 Score = 37.7 bits (86), Expect = 0.004 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 108 GRRPRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAP 162 G PR P G P+ L P H GG WC PP PS P PPAP Sbjct: 42 GSAPRSPAPREGPPPV-LASPAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAP 95 >gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo sapiens] Length = 228 Score = 37.7 bits (86), Expect = 0.004 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 108 GRRPRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAP 162 G PR P G P+ L P H GG WC PP PS P PPAP Sbjct: 50 GSAPRSPAPREGPPPV-LASPAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAP 103 >gi|7657405 odorant binding protein 2A precursor [Homo sapiens] Length = 170 Score = 32.7 bits (73), Expect = 0.14 Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 8 DQDFLDSKDTMKMAVVLVTPLGNGDLALKFGYPTPHGGCQKMDTTFTEGAVPGQFSNPAM 67 D+DF + + K++ V VT LG G+L F + C + + PG+FS Sbjct: 37 DKDFPEDRRPRKVSPVKVTALGGGNLEATFTF-MREDRCIQKKILMRKTEEPGKFSAYGG 95 Query: 68 ALSDIRVAFSDYQHFALLYLEMRKGGLRNQWLQLYGGRAAGRRP 111 + + R+GGLR Y G+ GR P Sbjct: 96 RKLIYLQELPGTDDYVFYCKDQRRGGLR------YMGKLVGRNP 133 >gi|48717447 lipocalin 9 [Homo sapiens] Length = 176 Score = 32.0 bits (71), Expect = 0.25 Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 4 VVSDDQDFLDSKDTMKMAVVLVTPLGNGDLALKFGYPTPHGGCQKMDTTFTEGAVPGQFS 63 + SDD + + +++ V + L NG L F Y G C + + G++S Sbjct: 42 MASDDLNRIKENGDLRVFVRNIEHLKNGSLIFDFEYMV-QGECVAVVVVCEKTEKNGEYS 100 Query: 64 NPAMALSDIRVAFSDYQHFALLYLEMRKGGLRNQWLQLY 102 + + V+ +DY+ F +L+ + G L LY Sbjct: 101 INYEGQNTVAVSETDYRLFITFHLQNFRNGTETHTLALY 139 >gi|225690502 junctophilin 4 [Homo sapiens] Length = 628 Score = 32.0 bits (71), Expect = 0.25 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 106 AAGRRPRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPA 161 A GRRPR GS PL P ++ G T P +P+ P S + PPA Sbjct: 422 APGRRPRQDSEGSDTEPLDEDSPGVYENGLTPSEGS--PELPSSPASSRQPWRPPA 475 >gi|225690500 junctophilin 4 [Homo sapiens] Length = 628 Score = 32.0 bits (71), Expect = 0.25 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 106 AAGRRPRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPA 161 A GRRPR GS PL P ++ G T P +P+ P S + PPA Sbjct: 422 APGRRPRQDSEGSDTEPLDEDSPGVYENGLTPSEGS--PELPSSPASSRQPWRPPA 475 >gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4 [Homo sapiens] Length = 456 Score = 30.8 bits (68), Expect = 0.55 Identities = 12/20 (60%), Positives = 12/20 (60%) Query: 143 WPRVPAPPCPSLPLFAPPAP 162 WP P PP P PL APP P Sbjct: 4 WPAPPPPPPPPPPLAAPPPP 23 >gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo sapiens] Length = 425 Score = 30.4 bits (67), Expect = 0.72 Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 103 GGRAAGRRPRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAP 162 GG A R R G L LH F GG P PAPP P+ P + PAP Sbjct: 350 GGGAGAERDR----GGASGFLTLHNAFPKEAGGGVTVTVTGP--PAPPAPAPPAPSAPAP 403 >gi|167830477 milk fat globule-EGF factor 8 protein isoform b [Homo sapiens] Length = 335 Score = 29.6 bits (65), Expect = 1.2 Identities = 13/43 (30%), Positives = 20/43 (46%) Query: 56 GAVPGQFSNPAMALSDIRVAFSDYQHFALLYLEMRKGGLRNQW 98 G G +N +A S +RV F QH+ + + G+ N W Sbjct: 75 GLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAW 117 >gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Homo sapiens] Length = 387 Score = 29.6 bits (65), Expect = 1.2 Identities = 13/43 (30%), Positives = 20/43 (46%) Query: 56 GAVPGQFSNPAMALSDIRVAFSDYQHFALLYLEMRKGGLRNQW 98 G G +N +A S +RV F QH+ + + G+ N W Sbjct: 75 GLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAW 117 >gi|15718767 TRAAK [Homo sapiens] Length = 393 Score = 29.6 bits (65), Expect = 1.2 Identities = 11/20 (55%), Positives = 14/20 (70%) Query: 144 PRVPAPPCPSLPLFAPPAPS 163 P +P PPCP+ PL P +PS Sbjct: 302 PLLPPPPCPAQPLGRPRSPS 321 >gi|32479527 potassium voltage-gated channel, KQT-like subfamily, member 1 isoform 1 [Homo sapiens] Length = 676 Score = 29.3 bits (64), Expect = 1.6 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 108 GRRPRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAPS 163 GR P R +G++ C L AEGG AG P P P P+ P +P AP+ Sbjct: 18 GRLPGARRGSAGLAKKCPFSLEL-AEGGPAGGALYAPIAPGAPGPAPPA-SPAAPA 71 >gi|239757644 PREDICTED: hypothetical protein [Homo sapiens] Length = 101 Score = 29.3 bits (64), Expect = 1.6 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%) Query: 138 GSWCLWPRVPAPPCPSLPLFAPPAP 162 G C W +PAP CP+ P A P P Sbjct: 19 GQACRWEPIPAPQCPAAP--AGPTP 41 >gi|111955326 MLX interacting protein [Homo sapiens] Length = 919 Score = 29.3 bits (64), Expect = 1.6 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 116 FGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPP--CPSLPLFAPPAPSL 164 FG PL + QPFL + L PAPP P LPL PPA +L Sbjct: 415 FGPSEPPLSVPQPFL-----PVFTMPLLSPSPAPPPISPVLPLVPPPATAL 460 >gi|39573716 lipocalin 6 [Homo sapiens] Length = 163 Score = 29.3 bits (64), Expect = 1.6 Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 7/105 (6%) Query: 1 MVGVVSDDQDFLDSKDTMKMA--VVLVTPLGN-GDLALKFGYPTPHGGCQKMDTTFTEGA 57 ++ V S ++ F KD + VV +TP N L+ + G GGC + + Sbjct: 37 VLAVASREKGFAMEKDMKNVVGVVVTLTPENNLRTLSSQHGL----GGCDQSVMDLIKRN 92 Query: 58 VPGQFSNPAMALSDIRVAFSDYQHFALLYLEMRKGGLRNQWLQLY 102 F NP++ + ++ V ++++ +A+++ ++ G ++LY Sbjct: 93 SGWVFENPSIGVLELWVLATNFRDYAIIFTQLEFGDEPFNTVELY 137 >gi|4502119 amine oxidase, copper containing 3 precursor [Homo sapiens] Length = 763 Score = 28.9 bits (63), Expect = 2.1 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%) Query: 133 EGGTAGSWCLWPRVPAPPCPSLPL-FAPPAP 162 + GT GSW L + P PP P+ PL F P P Sbjct: 293 DNGTGGSWSL--KSPVPPGPAPPLQFYPQGP 321 >gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] Length = 663 Score = 28.9 bits (63), Expect = 2.1 Identities = 13/29 (44%), Positives = 16/29 (55%) Query: 134 GGTAGSWCLWPRVPAPPCPSLPLFAPPAP 162 GG++G+ P PAPP P P PP P Sbjct: 140 GGSSGAQPSAPPPPAPPLPPTPSPPPPPP 168 >gi|169212010 PREDICTED: hypothetical protein [Homo sapiens] Length = 148 Score = 28.5 bits (62), Expect = 2.7 Identities = 16/52 (30%), Positives = 20/52 (38%) Query: 109 RRPRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPP 160 R R PR GS + + + G A WC W + CPS F P Sbjct: 13 RAARMPRAGSSAWWVAVRKQVCTRVGTCAACWCSWSTGRSTACPSWKDFWKP 64 >gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sapiens] Length = 1258 Score = 28.5 bits (62), Expect = 2.7 Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 11/50 (22%) Query: 112 RHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPA 161 RHPR G G S GGT P P PP P +F PP+ Sbjct: 1030 RHPRVGEGSSSD-------EESGGTLPP----PDFPPPPLPDSAIFLPPS 1068 >gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 3 [Homo sapiens] Length = 970 Score = 28.5 bits (62), Expect = 2.7 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 8/97 (8%) Query: 74 VAFSDYQHFALLYLEMRKGGLRNQWLQ---LYGGRAAGRRPRHPRFGSGMSPLCLHQPFL 130 + FSD ++ + M +R+ LQ Y + RP PR GSG P+ + + Sbjct: 783 INFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLSPRPGTPREGSGGEPVHEGRQPV 842 Query: 131 HAEGGTAGSWCLWPRVPAP-----PCPSLPLFAPPAP 162 H +G A P P PCP P+P Sbjct: 843 HRQGHQAPEGFCQRSAPGPAICPAPCPGQAAGLDPSP 879 >gi|166197660 complement component 8, gamma polypeptide [Homo sapiens] Length = 202 Score = 28.1 bits (61), Expect = 3.6 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 44 GGCQKMDTTFTEGAVPGQF---SNPAMALSDIRVAFSDYQHFALLYLE 88 G C ++ + + V G+F + A + VA +DYQ FA+LYLE Sbjct: 94 GICWQVRQLYGDTGVLGRFLLQARDARGAVHVVVAETDYQSFAVLYLE 141 >gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] Length = 1003 Score = 28.1 bits (61), Expect = 3.6 Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 3/53 (5%) Query: 111 PRHPRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAPS 163 P P SG P H G T+GS P PAPP S AP PS Sbjct: 440 PPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASK---APVVPS 489 >gi|222352122 hypothetical protein LOC284297 [Homo sapiens] Length = 1573 Score = 27.7 bits (60), Expect = 4.6 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%) Query: 114 PRFGSGMSPLCLHQPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPPAPS 163 P G+G + P L G T WP PP P+ APP PS Sbjct: 960 PTLGAGTTRSPGSPPTLRVHGDTGSPRKPWPE-RRPPRPAATRTAPPTPS 1008 >gi|145309320 forkhead box Q1 [Homo sapiens] Length = 403 Score = 27.7 bits (60), Expect = 4.6 Identities = 10/25 (40%), Positives = 12/25 (48%) Query: 138 GSWCLWPRVPAPPCPSLPLFAPPAP 162 G+ W P PP P+ P P AP Sbjct: 292 GTTLQWGAAPCPPLPAFPALLPAAP 316 >gi|124249376 proline rich 21 [Homo sapiens] Length = 389 Score = 27.7 bits (60), Expect = 4.6 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Query: 116 FGSGMSPLCLH-QPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPP 160 F G S + LH +PFLHA TA CL+ P+ S+PL P Sbjct: 139 FTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPS----SMPLHPRP 180 Score = 27.7 bits (60), Expect = 4.6 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Query: 116 FGSGMSPLCLH-QPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPP 160 F G S + LH +PFLHA TA CL+ P+ S+PL P Sbjct: 251 FTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPS----SMPLHPRP 292 Score = 27.3 bits (59), Expect = 6.1 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 113 HPR-FGSGMSPLCLH-QPFLHAEGGTAGSWCLWPRVPAPPCPSLPLFAPP 160 HPR F S + LH +PF+HA TA CL+ P+ S+PL P Sbjct: 79 HPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPS----SMPLHPRP 124 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.140 0.464 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,976,508 Number of Sequences: 37866 Number of extensions: 417931 Number of successful extensions: 1914 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 1865 Number of HSP's gapped (non-prelim): 71 length of query: 164 length of database: 18,247,518 effective HSP length: 94 effective length of query: 70 effective length of database: 14,688,114 effective search space: 1028167980 effective search space used: 1028167980 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.