Guide to the Human Genome
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Name: AOC3 Sequence: fasta or formatted (763aa) NCBI GI: 4502119
Description:

amine oxidase, copper containing 3 precursor

Referenced in:

Histamine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         64           3
 C cysteine            1.3         10           2
 D aspartate           4.5         34           1
 E glutamate           4.6         35           3
 F phenylalanine       6.2         47           2
 G glycine             8.4         64           2
 H histidine           3.7         28           2
 I isoleucine          3.0         23           1
 K lysine              1.8         14           1
 L leucine            10.1         77           2
 M methionine          1.7         13           1
 N asparagine          3.4         26           2
 P proline             7.6         58           3
 Q glutamine           5.0         38           1
 R arginine            5.4         41           2
 S serine              7.1         54           4
 T threonine           4.7         36           2
 V valine              7.5         57           2
 W tryptophan          1.8         14           1
 Y tyrosine            3.9         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amine oxidase, copper containing 3 precursor 
AOC2                  0.635   amine oxidase, copper containing 2 isoform b 
AOC2                  0.611   amine oxidase, copper containing 2 isoform a 
ABP1                  0.324   amiloride binding protein 1 precursor 
SORCS3                0.006   VPS10 domain receptor protein SORCS 3 
FOXD4L1               0.004   forkhead box D4-like 1 
SYNPO                 0.004   synaptopodin isoform A 
FOXD4                 0.004   forkhead box D4 
C11orf45              0.004   hypothetical protein LOC219833 
PTGR1                 0.004   prostaglandin reductase 1 isoform 1 
PTGR1                 0.004   prostaglandin reductase 1 isoform 1 
PTGR1                 0.004   prostaglandin reductase 1 isoform 2 
LDB3                  0.004   LIM domain binding 3 isoform 1 
C16orf5               0.004   cell death inducing protein 
FOXD4L3               0.003   forkhead box D4-like 3 
FOXD4L6               0.003   forkhead box D4-like 6 
LCA5L                 0.003   Leber congenital amaurosis 5-like 
NEU4                  0.003   sialidase 4 
ZP4                   0.003   zona pellucida glycoprotein 4 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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