Guide to the Human Genome
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Name: MFGE8 Sequence: fasta or formatted (335aa) NCBI GI: 167830477
Description:

milk fat globule-EGF factor 8 protein isoform b

Referenced in:

Mammary Tissues

Other entries for this name:
alt prot [387aa] milk fat globule-EGF factor 8 protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         27           2
 C cysteine            4.2         14           1
 D aspartate           3.0         10           2
 E glutamate           4.8         16           2
 F phenylalanine       3.6         12           1
 G glycine             6.9         23           2
 H histidine           3.9         13           1
 I isoleucine          3.6         12           1
 K lysine              4.5         15           2
 L leucine            11.9         40           2
 M methionine          0.9          3           1
 N asparagine          8.7         29           2
 P proline             5.1         17           1
 Q glutamine           3.0         10           1
 R arginine            4.8         16           2
 S serine              6.3         21           3
 T threonine           4.2         14           1
 V valine              6.6         22           2
 W tryptophan          3.3         11           1
 Y tyrosine            3.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   milk fat globule-EGF factor 8 protein isoform b [Ho... 
MFGE8                 0.964   milk fat globule-EGF factor 8 protein isoform a [Ho...
EDIL3                 0.415   EGF-like repeats and discoidin I-like domains-contai...
F5                    0.245   coagulation factor V precursor 
F8                    0.219   coagulation factor VIII isoform a precursor 
NRP2                  0.144   neuropilin 2 isoform 3 precursor 
NRP2                  0.144   neuropilin 2 isoform 5 precursor 
NRP2                  0.144   neuropilin 2 isoform 1 precursor 
NRP2                  0.144   neuropilin 2 isoform 4 precursor 
NRP2                  0.144   neuropilin 2 isoform 2 precursor 
NRP2                  0.138   neuropilin 2 isoform 6 precursor 
F8                    0.136   coagulation factor VIII isoform b precursor 
NRP1                  0.131   neuropilin 1 isoform c 
NRP1                  0.131   neuropilin 1 isoform b 
NRP1                  0.131   neuropilin 1 isoform a 
DCBLD2                0.090   discoidin, CUB and LCCL domain containing 2 
RS1                   0.080   X-linked juvenile retinoschisis protein precursor [H...
DCBLD1                0.068   discoidin, CUB and LCCL domain containing 1 
CPXM2                 0.065   carboxypeptidase X (M14 family), member 2 
AEBP1                 0.064   adipocyte enhancer binding protein 1 precursor [Homo...
CNTNAP2               0.061   cell recognition molecule Caspr2 precursor 
CPXM1                 0.049   carboxypeptidase X, member 1 precursor 
LOC389722             0.049   PREDICTED: hypothetical protein LOC389722 isoform 2...
LOC389722             0.049   PREDICTED: hypothetical protein LOC389722 isoform 1...
LOC642406             0.048   PREDICTED: similar to contactin associated protein-...
CNTNAP3               0.048   cell recognition molecule CASPR3 
CNTNAP4               0.039   cell recognition protein CASPR4 isoform 2 
CNTNAP4               0.039   cell recognition protein CASPR4 isoform 1 
DDR2                  0.038   discoidin domain receptor family, member 2 precursor...
DDR2                  0.038   discoidin domain receptor family, member 2 precursor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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