Guide to the Human Genome
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Name: OBP2A Sequence: fasta or formatted (170aa) NCBI GI: 7657405
Description:

odorant binding protein 2A precursor

Referenced in:

Lacrimal and Salivary Glands

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          8           3
 C cysteine            1.8          3           1
 D aspartate           5.3          9           2
 E glutamate           8.8         15           3
 F phenylalanine       5.3          9           1
 G glycine             9.4         16           3
 H histidine           1.2          2           1
 I isoleucine          2.9          5           1
 K lysine              8.8         15           2
 L leucine            11.8         20           1
 M methionine          3.5          6           1
 N asparagine          2.4          4           1
 P proline             4.1          7           1
 Q glutamine           2.9          5           1
 R arginine            6.5         11           2
 S serine              2.9          5           1
 T threonine           7.1         12           1
 V valine              6.5         11           2
 W tryptophan          0.6          1           1
 Y tyrosine            3.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   odorant binding protein 2A precursor 
OBP2B                 0.885   odorant binding protein 2B 
LCN1                  0.366   lipocalin 1 precursor 
LOC100129193          0.065   PREDICTED: similar to hCG1795014 
LOC100129193          0.065   PREDICTED: similar to hCG1795014 
LOC100129193          0.065   PREDICTED: similar to hCG1795014 
PTGDS                 0.043   prostaglandin H2 D-isomerase 
PAEP                  0.037   glycodelin precursor 
PAEP                  0.037   glycodelin precursor 
LCN9                  0.031   lipocalin 9 
LCNL1                 0.025   lipocalin-like 1 
LCN2                  0.022   lipocalin 2 
LCN10                 0.022   lipocalin 10 
CCT5                  0.016   chaperonin containing TCP1, subunit 5 (epsilon) [Hom...
ORM1                  0.009   orosomucoid 1 precursor 
FASN                  0.009   fatty acid synthase 
LCN8                  0.009   lipocalin 8 
LCN12                 0.006   lipocalcin 12 
CNTN5                 0.006   contactin 5 isoform long 
CNTN5                 0.006   contactin 5 isoform short 
N4BP2                 0.006   Nedd4 binding protein 2 
KIAA1033              0.006   hypothetical protein LOC23325 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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