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Search of human proteins with 14602449
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
(113 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 229 4e-61
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 159 3e-40
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 149 5e-37
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 79 6e-16
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 76 5e-15
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 76 5e-15
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 75 1e-14
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 72 9e-14
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 65 2e-11
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 65 2e-11
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 64 2e-11
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 63 6e-11
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 62 1e-10
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 55 9e-09
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 55 1e-08
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 55 1e-08
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 55 2e-08
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 53 6e-08
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 52 8e-08
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 52 1e-07
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 50 4e-07
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 49 1e-06
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 47 3e-06
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 46 6e-06
gi|4506833 small inducible cytokine A1 precursor [Homo sapiens] 46 7e-06
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 44 2e-05
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 44 4e-05
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 44 4e-05
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens] 37 0.003
gi|4506851 chemokine (C-X-C motif) ligand 6 (granulocyte chemota... 32 0.11
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 229 bits (584), Expect = 4e-61
Identities = 113/113 (100%), Positives = 113/113 (100%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ
Sbjct: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
Query: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI 113
SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI
Sbjct: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI 113
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 159 bits (403), Expect = 3e-40
Identities = 80/110 (72%), Positives = 91/110 (82%), Gaps = 1/110 (0%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHF-AADCCTSYIS 59
MKVSVAALSCLMLV LGSQA+ DAETE MMSKLPLENPV+L+ FH +ADCC SY
Sbjct: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
Query: 60 QSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
+SIPCSL++SYFET+SECSKPGVIFLTKKGR+ CA PS VQ C++ LK
Sbjct: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 149 bits (376), Expect = 5e-37
Identities = 80/127 (62%), Positives = 91/127 (71%), Gaps = 18/127 (14%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLN--------------- 45
MKVSVAALSCLMLV LGSQA+ DAETE MMSKLPLENPV+L+
Sbjct: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLSH 60
Query: 46 --SFHF-AADCCTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQ 102
FH +ADCC SY +SIPCSL++SYFET+SECSKPGVIFLTKKGR+ CA PS VQ
Sbjct: 61 AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
Query: 103 DCMKKLK 109
C++ LK
Sbjct: 121 VCVRMLK 127
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 79.3 bits (194), Expect = 6e-16
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Query: 1 MKVSVAALSCLMLVAV-LGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYIS 59
MK+SVAA+ +L+ + LG++ + + + + K+ L+ +V +H ++CC +Y +
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLK--LVGGPYH-PSECCFTYTT 57
Query: 60 QSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
IP + Y+ET+S+CSKPG++F+TK+G VC PS VQD +K +K
Sbjct: 58 YKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 76.3 bits (186), Expect = 5e-15
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 19/109 (17%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
M+VS AAL+ L+ L +Q ++ + L + P CC SY S+
Sbjct: 1 MQVSTAALAVLLCTMALCNQ----------VLSAPLAADTPTA---------CCFSYTSR 41
Query: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
IP + + YFETSS+CSKP VIFLTK+GRQVCA PS VQ + L+
Sbjct: 42 QIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLE 90
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 76.3 bits (186), Expect = 5e-15
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 19/109 (17%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
M+VS AAL+ L+ L +Q ++ + L + P CC SY S+
Sbjct: 1 MQVSTAALAVLLCTMALCNQ----------VLSAPLAADTPTA---------CCFSYTSR 41
Query: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
IP + + YFETSS+CSKP VIFLTK+GRQVCA PS VQ + L+
Sbjct: 42 QIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLE 90
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 75.1 bits (183), Expect = 1e-14
Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 20/109 (18%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
M+VS AAL+ L+ L +Q + L + P CC SY S+
Sbjct: 1 MQVSTAALAVLLCTMALCNQ-----------FSASLAADTPTA---------CCFSYTSR 40
Query: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
IP + + YFETSS+CSKPGVIFLTK+ RQVCA PS VQ + L+
Sbjct: 41 QIPQNFIADYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDLE 89
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 72.0 bits (175), Expect = 9e-14
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 20/110 (18%)
Query: 1 MKVSVAALSCLMLVAV-LGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYIS 59
MK+SVAA+ +L+ + LG++ + S+ P + ++CC +Y +
Sbjct: 1 MKISVAAIPFFLLITIALGTKTE---------SSSRGP----------YHPSECCFTYTT 41
Query: 60 QSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
IP + Y+ET+S+CSKPG++F+TK+G VC PS VQD +K +K
Sbjct: 42 YKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 64.7 bits (156), Expect = 2e-11
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 19/109 (17%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MK+ V LS L+LVA S A + + + + P CC SY ++
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLA----------LSAPMGSDPPTA---------CCFSYTAR 41
Query: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
+P + + Y+ETSS CS+P V+F TK+G+QVCA PS VQ+ + L+
Sbjct: 42 KLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 64.7 bits (156), Expect = 2e-11
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 19/109 (17%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MK+ V LS L+LVA S A + + + + P CC SY ++
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLA----------LSAPMGSDPPTA---------CCFSYTAR 41
Query: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
+P + + Y+ETSS CS+P V+F TK+G+QVCA PS VQ+ + L+
Sbjct: 42 KLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 64.3 bits (155), Expect = 2e-11
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 19/109 (17%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MK+ V LS LMLVA S A + + + + P CC SY ++
Sbjct: 1 MKLCVTVLSLLMLVAAFCSPA----------LSAPMGSDPPTA---------CCFSYTAR 41
Query: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
+P + + Y+ETSS CS+P V+F TK+ +QVCA PS VQ+ + L+
Sbjct: 42 KLPRNFVVDYYETSSLCSQPAVVFQTKRSKQVCADPSESWVQEYVYDLE 90
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 62.8 bits (151), Expect = 6e-11
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 20/109 (18%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MKVS AAL+ +++ L + A S P + CC +YI++
Sbjct: 1 MKVSAAALAVILIATALCAPA------------SASPYSSDTT--------PCCFAYIAR 40
Query: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
+P + +K YF TS +CS P V+F+T+K RQVCA P V++ + L+
Sbjct: 41 PLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 62.0 bits (149), Expect = 1e-10
Identities = 29/57 (50%), Positives = 35/57 (61%)
Query: 53 CCTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
CC Y S IP + Y ETS +C KPGVI LTK+GRQ+CA P+ VQ + LK
Sbjct: 30 CCLVYTSWQIPQKFIVDYSETSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDLK 86
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 55.5 bits (132), Expect = 9e-09
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MKVS L L++ A Q L P LN + CC ++ S+
Sbjct: 1 MKVSAVLLCLLLMTAAFNPQG----------------LAQPDALN---VPSTCCFTFSSK 41
Query: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108
I +KSY T+S C + VIF TK G+++CA P VQ+ MK L
Sbjct: 42 KISLQRLKSYVITTSRCPQKAVIFRTKLGKEICADPKEKWVQNYMKHL 89
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 55.1 bits (131), Expect = 1e-08
Identities = 19/58 (32%), Positives = 39/58 (67%)
Query: 52 DCCTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
+CC Y +IP +K++++TS +CS+ ++F+T +GR +C+ P+ V++ +K L+
Sbjct: 32 ECCLEYFKGAIPLRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNNKRVKNAVKYLQ 89
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens]
Length = 99
Score = 55.1 bits (131), Expect = 1e-08
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 20/109 (18%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MK S AAL CL+L A S L PV +N+ + CC +I++
Sbjct: 1 MKAS-AALLCLLLTAAA---------------FSPQGLAQPVGINT---STTCCYRFINK 41
Query: 61 SIPCSLMKSYFET-SSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108
IP ++SY T SS C + VIF TK +++CA P+ VQD MK L
Sbjct: 42 KIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDFMKHL 90
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 54.7 bits (130), Expect = 2e-08
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MKVS A L L++ A Q L P +S CC + I++
Sbjct: 1 MKVSAALLCLLLMAATFSPQG----------------LAQP---DSVSIPITCCFNVINR 41
Query: 61 SIPCSLMKSYFE-TSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108
IP ++SY T+ +C K VIF TK+G++VCA P V+D MK L
Sbjct: 42 KIPIQRLESYTRITNIQCPKEAVIFKTKRGKEVCADPKERWVRDSMKHL 90
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 52.8 bits (125), Expect = 6e-08
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 53 CCTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108
CC Y+ +P ++K ++ TS C +PGV+ LT + +++CA P P V+ + KL
Sbjct: 36 CCRDYVRYRLPLRVVKHFYWTSDSCPRPGVVLLTFRDKEICADPRVPWVKMILNKL 91
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 52.4 bits (124), Expect = 8e-08
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MKVS AALS L+L+ ++ S ++ P V + + CC Y +
Sbjct: 1 MKVSEAALSLLVLILIITSASR----------------SQPKVPEWVNTPSTCCLKYYEK 44
Query: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMK 106
+P L+ Y + C P +IF+TK+ R+VC P+ VQ+ +K
Sbjct: 45 VLPRRLVVGY-RKALNCHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens]
Length = 94
Score = 52.0 bits (123), Expect = 1e-07
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 27 AETELMMSKLPLENPVVLNSFHFAADCCTSYISQSIPCSLMKSYFETSSECSKPGVIFLT 86
A L+ S L L + CC Y + +P + ++SY TS+ CS+ VIF T
Sbjct: 7 ASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTT 66
Query: 87 KKGRQVCAKPSGPGVQDCMKKLK 109
K+G++VC P VQ + LK
Sbjct: 67 KRGKKVCTHPRKKWVQKYISLLK 89
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 50.1 bits (118), Expect = 4e-07
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 29 TELMMSKLPLENPVVLNSFHFAADCCTSYISQSIPCSLMKSY-FETSSECSKPGVIFLTK 87
T L+ + + + S + CC ++S+ IP + + SY + S C K GVIF TK
Sbjct: 9 TSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTK 68
Query: 88 KGRQVCAKPSGPGVQDCMKKL 108
KG+Q C P VQ MK L
Sbjct: 69 KGQQFCGDPKQEWVQRYMKNL 89
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 48.5 bits (114), Expect = 1e-06
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MKVS AAL CL+L+A A FI L P +N+ CC ++ ++
Sbjct: 1 MKVS-AALLCLLLIA-----ATFIPQG----------LAQPDAINA---PVTCCYNFTNR 41
Query: 61 SIPCSLMKSYFE-TSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108
I + SY TSS+C K VIF T +++CA P VQD M L
Sbjct: 42 KISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 47.0 bits (110), Expect = 3e-06
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 44 LNSFHFAADCCTSYISQSIPCSLMKS--YFETSSECSKPGVIFLTKKGRQVCAKPSGPGV 101
L+ + A DCC S + IP ++++ Y C P V+F T +GRQ+CA P P V
Sbjct: 20 LSGTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWV 79
Query: 102 QDCMKKLK 109
+ +++L+
Sbjct: 80 ERIIQRLQ 87
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 46.2 bits (108), Expect = 6e-06
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
MKVS A L L++ A Q L P + + CC + ++
Sbjct: 1 MKVSAALLWLLLIAAAFSPQG----------------LAGPASVPT-----TCCFNLANR 39
Query: 61 SIPCSLMKSYFE-TSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108
IP ++SY TS +C + VIF TK + +CA P VQD MK L
Sbjct: 40 KIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
>gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
Length = 96
Score = 45.8 bits (107), Expect = 7e-06
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 53 CCTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
CC S+ Q IP + Y TSS CS G+IF K+G++ CA + VQ K L+
Sbjct: 33 CCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 44.3 bits (103), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 50 AADCCTSYISQSIPCSLMKSY--FETSSECSKPGVIFLTKKGRQ--VCAKPSGPGVQDCM 105
A DCC Y + IP +++SY E S CS P ++FL +K Q +CA P VQ M
Sbjct: 28 AQDCCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLM 87
Query: 106 KKL 108
+ L
Sbjct: 88 QHL 90
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 43.5 bits (101), Expect = 4e-05
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 54 CTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108
C S +Q +P S +K+Y T +E S VIF+TK+G +VCA P V+D ++ +
Sbjct: 32 CVSLTTQRLPVSRIKTY--TITEGSLRAVIFITKRGLKVCADPQATWVRDVVRSM 84
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 43.5 bits (101), Expect = 4e-05
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 54 CTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108
C S +Q +P S +K+Y T +E S VIF+TK+G +VCA P V+D ++ +
Sbjct: 32 CVSLTTQRLPVSRIKTY--TITEGSLRAVIFITKRGLKVCADPQATWVRDVVRSM 84
>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
Length = 397
Score = 37.0 bits (84), Expect = 0.003
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 42 VVLNSFHFAADCCT---SYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSG 98
V+L H C S ++ IP +L+ Y + + C K +I T++ R CA P
Sbjct: 20 VLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAIILETRQHRLFCADPKE 79
Query: 99 PGVQDCMKKL 108
V+D M+ L
Sbjct: 80 QWVKDAMQHL 89
>gi|4506851 chemokine (C-X-C motif) ligand 6 (granulocyte
chemotactic protein 2) [Homo sapiens]
Length = 114
Score = 32.0 bits (71), Expect = 0.11
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 71 FETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108
F +CSK V+ K G+QVC P P ++ ++K+
Sbjct: 69 FPAGPQCSKVEVVASLKNGKQVCLDPEAPFLKKVIQKI 106
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.131 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,284,654
Number of Sequences: 37866
Number of extensions: 157145
Number of successful extensions: 340
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 283
Number of HSP's gapped (non-prelim): 52
length of query: 113
length of database: 18,247,518
effective HSP length: 83
effective length of query: 30
effective length of database: 15,104,640
effective search space: 453139200
effective search space used: 453139200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.