Guide to the Human Genome
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Name: ASPH Sequence: fasta or formatted (210aa) NCBI GI: 14589862
Description:

aspartate beta-hydroxylase isoform d

Referenced in:

Additional Protein Modifications

Other entries for this name:
alt prot [313aa] aspartate beta-hydroxylase isoform c
alt prot [299aa] aspartate beta-hydroxylase isoform b
alt prot [758aa] aspartate beta-hydroxylase isoform a
alt prot [225aa] aspartate beta-hydroxylase isoform e
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         12           1
 C cysteine            0.0          0           0
 D aspartate           9.5         20           2
 E glutamate          10.0         21           2
 F phenylalanine       2.4          5           2
 G glycine             8.1         17           2
 H histidine           1.4          3           1
 I isoleucine          1.4          3           1
 K lysine             20.0         42           2
 L leucine             6.2         13           2
 M methionine          1.9          4           1
 N asparagine          2.9          6           1
 P proline             1.4          3           1
 Q glutamine           0.5          1           1
 R arginine            6.2         13           1
 S serine              7.6         16           2
 T threonine           5.2         11           1
 V valine              6.7         14           2
 W tryptophan          1.4          3           1
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aspartate beta-hydroxylase isoform d 
ASPH                  0.975   aspartate beta-hydroxylase isoform e 
ASPH                  0.357   aspartate beta-hydroxylase isoform c 
ASPH                  0.357   aspartate beta-hydroxylase isoform a 
ASPH                  0.352   aspartate beta-hydroxylase isoform b 
TRDN                  0.116   triadin 
LOC100133599          0.091   PREDICTED: hypothetical protein 
LOC100133599          0.091   PREDICTED: hypothetical protein 
CYLC1                 0.091   cylicin, basic protein of sperm head cytoskeleton 1...
LOC100294088          0.086   PREDICTED: hypothetical protein, partial 
SFRS12                0.081   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.081   splicing factor, arginine/serine-rich 12 isoform b [...
MAP1B                 0.073   microtubule-associated protein 1B 
CYLC2                 0.066   cylicin 2 
FAM133B               0.066   hypothetical protein LOC257415 isoform 2 
FAM133B               0.066   hypothetical protein LOC257415 isoform 1 
ANKRD12               0.063   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.063   ankyrin repeat domain 12 isoform 1 
FAM133A               0.063   hypothetical protein LOC286499 
SFRS4                 0.063   splicing factor, arginine/serine-rich 4 
CCAR1                 0.063   cell-cycle and apoptosis regulatory protein 1 
RBM25                 0.061   RNA binding motif protein 25 
NKAP                  0.061   NFKB activating protein 
MPHOSPH8              0.061   M-phase phosphoprotein 8 
WDR60                 0.061   WD repeat domain 60 
CROP                  0.061   cisplatin resistance-associated overexpressed protei...
CROP                  0.061   cisplatin resistance-associated overexpressed protei...
CHAF1A                0.061   chromatin assembly factor 1, subunit A (p150) 
THOC2                 0.061   THO complex 2 
UPF2                  0.061   UPF2 regulator of nonsense transcripts homolog [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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