Guide to the Human Genome
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Name: OR8K5 Sequence: fasta or formatted (307aa) NCBI GI: 145279179
Description:

olfactory receptor, family 8, subfamily K, member 5

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         16           2
 C cysteine            2.9          9           1
 D aspartate           2.6          8           2
 E glutamate           3.3         10           2
 F phenylalanine       8.8         27           2
 G glycine             2.9          9           1
 H histidine           2.9          9           1
 I isoleucine          8.5         26           2
 K lysine              2.6          8           2
 L leucine            14.7         45           2
 M methionine          4.9         15           1
 N asparagine          4.6         14           1
 P proline             3.3         10           1
 Q glutamine           2.9          9           1
 R arginine            2.6          8           2
 S serine              7.5         23           2
 T threonine           5.9         18           1
 V valine              8.5         26           4
 W tryptophan          0.0          0           0
 Y tyrosine            5.5         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily K, member 5... 
OR8K3                 0.697   olfactory receptor, family 8, subfamily K, member 3 ...
OR8K1                 0.639   olfactory receptor, family 8, subfamily K, member 1 ...
OR5R1                 0.579   olfactory receptor, family 5, subfamily R, member 1 ...
OR8J3                 0.569   olfactory receptor, family 8, subfamily J, member 3 ...
OR8J1                 0.562   olfactory receptor, family 8, subfamily J, member 1 ...
OR8U1                 0.561   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U9                 0.561   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U8                 0.549   olfactory receptor, family 8, subfamily U, member 8 ...
OR5B12                0.503   olfactory receptor, family 5, subfamily B, member 12...
OR5AR1                0.499   olfactory receptor, family 5, subfamily AR, member 1...
OR8D2                 0.482   olfactory receptor, family 8, subfamily D, member 2 ...
OR8D4                 0.480   olfactory receptor, family 8, subfamily D, member 4 ...
OR5B21                0.480   olfactory receptor, family 5, subfamily B, member 21...
OR9G4                 0.479   olfactory receptor, family 9, subfamily G, member 4 ...
OR8D1                 0.479   olfactory receptor, family 8, subfamily D, member 1 ...
OR5B17                0.477   olfactory receptor, family 5, subfamily B, member 17...
OR5AP2                0.475   olfactory receptor, family 5, subfamily AP, member 2...
OR8G1                 0.475   olfactory receptor, family 8, subfamily G, member 1 ...
OR5AS1                0.472   olfactory receptor, family 5, subfamily AS, member 1...
OR8A1                 0.472   olfactory receptor, family 8, subfamily A, member 1 ...
OR5M8                 0.468   olfactory receptor, family 5, subfamily M, member 8 ...
OR8G5                 0.467   olfactory receptor, family 8, subfamily G, member 5 ...
OR5B2                 0.467   olfactory receptor, family 5, subfamily B, member 2 ...
OR5I1                 0.465   olfactory receptor, family 5, subfamily I, member 1 [...
OR8I2                 0.463   olfactory receptor, family 8, subfamily I, member 2 ...
OR5M1                 0.462   olfactory receptor, family 5, subfamily M, member 1 ...
OR8H1                 0.460   olfactory receptor, family 8, subfamily H, member 1 ...
OR5D18                0.460   olfactory receptor, family 5, subfamily D, member 18...
OR5W2                 0.460   olfactory receptor, family 5, subfamily W, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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