Guide to the Human Genome
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Name: OR8D2 Sequence: fasta or formatted (311aa) NCBI GI: 50897292
Description:

olfactory receptor, family 8, subfamily D, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         15           1
 C cysteine            2.6          8           1
 D aspartate           1.3          4           1
 E glutamate           3.5         11           2
 F phenylalanine       7.4         23           2
 G glycine             4.8         15           2
 H histidine           2.9          9           1
 I isoleucine          9.3         29           2
 K lysine              2.9          9           2
 L leucine            13.5         42           2
 M methionine          3.9         12           2
 N asparagine          3.2         10           1
 P proline             3.9         12           2
 Q glutamine           1.9          6           1
 R arginine            2.9          9           1
 S serine             11.3         35           2
 T threonine           7.1         22           2
 V valine              7.4         23           2
 W tryptophan          0.3          1           1
 Y tyrosine            5.1         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily D, member 2 ... 
OR8D1                 0.711   olfactory receptor, family 8, subfamily D, member 1 ...
OR8A1                 0.659   olfactory receptor, family 8, subfamily A, member 1 ...
OR8G1                 0.623   olfactory receptor, family 8, subfamily G, member 1 ...
OR8G5                 0.606   olfactory receptor, family 8, subfamily G, member 5 ...
OR8D4                 0.604   olfactory receptor, family 8, subfamily D, member 4 ...
OR8B3                 0.601   olfactory receptor, family 8, subfamily B, member 3 ...
OR8B8                 0.589   olfactory receptor, family 8, subfamily B, member 8 ...
OR8B2                 0.587   olfactory receptor, family 8, subfamily B, member 2 ...
OR8G2                 0.584   olfactory receptor, family 8, subfamily G, member 2 ...
OR8B12                0.552   olfactory receptor, family 8, subfamily B, member 12...
OR8B4                 0.538   olfactory receptor, family 8, subfamily B, member 4 ...
OR8U1                 0.535   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U8                 0.530   olfactory receptor, family 8, subfamily U, member 8 ...
OR5R1                 0.518   olfactory receptor, family 5, subfamily R, member 1 ...
OR5B12                0.516   olfactory receptor, family 5, subfamily B, member 12...
OR8U9                 0.514   olfactory receptor, family 8, subfamily U, member 9 ...
OR5AR1                0.491   olfactory receptor, family 5, subfamily AR, member 1...
OR8K3                 0.491   olfactory receptor, family 8, subfamily K, member 3 ...
OR8J3                 0.486   olfactory receptor, family 8, subfamily J, member 3 ...
OR5AU1                0.484   olfactory receptor, family 5, subfamily AU, member 1...
OR5D18                0.484   olfactory receptor, family 5, subfamily D, member 18...
OR8H1                 0.480   olfactory receptor, family 8, subfamily H, member 1 ...
OR5B3                 0.480   olfactory receptor, family 5, subfamily B, member 3 ...
OR8K5                 0.479   olfactory receptor, family 8, subfamily K, member 5...
OR8H2                 0.477   olfactory receptor, family 8, subfamily H, member 2 ...
OR8H3                 0.477   olfactory receptor, family 8, subfamily H, member 3 ...
OR8K1                 0.477   olfactory receptor, family 8, subfamily K, member 1 ...
OR5W2                 0.477   olfactory receptor, family 5, subfamily W, member 2 ...
OR5F1                 0.475   olfactory receptor, family 5, subfamily F, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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