Guide to the Human Genome
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Name: OR5B17 Sequence: fasta or formatted (314aa) NCBI GI: 53828696
Description:

olfactory receptor, family 5, subfamily B, member 17

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         21           2
 C cysteine            3.2         10           1
 D aspartate           2.9          9           1
 E glutamate           2.9          9           1
 F phenylalanine       7.0         22           2
 G glycine             3.8         12           1
 H histidine           2.9          9           2
 I isoleucine         10.5         33           2
 K lysine              4.1         13           1
 L leucine            13.1         41           2
 M methionine          4.1         13           1
 N asparagine          3.8         12           2
 P proline             3.2         10           1
 Q glutamine           1.3          4           1
 R arginine            1.9          6           1
 S serine              8.9         28           3
 T threonine           8.0         25           3
 V valine              6.7         21           2
 W tryptophan          0.0          0           0
 Y tyrosine            5.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily B, member 17... 
OR5B3                 0.723   olfactory receptor, family 5, subfamily B, member 3 ...
OR5B2                 0.718   olfactory receptor, family 5, subfamily B, member 2 ...
OR5B12                0.684   olfactory receptor, family 5, subfamily B, member 12...
OR5B21                0.627   olfactory receptor, family 5, subfamily B, member 21...
OR5AR1                0.508   olfactory receptor, family 5, subfamily AR, member 1...
OR8H2                 0.501   olfactory receptor, family 8, subfamily H, member 2 ...
OR5AP2                0.499   olfactory receptor, family 5, subfamily AP, member 2...
OR9G4                 0.491   olfactory receptor, family 9, subfamily G, member 4 ...
OR8H3                 0.486   olfactory receptor, family 8, subfamily H, member 3 ...
OR8U9                 0.482   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U1                 0.481   olfactory receptor, family 8, subfamily U, member 1 ...
OR5F1                 0.481   olfactory receptor, family 5, subfamily F, member 1 ...
OR5R1                 0.476   olfactory receptor, family 5, subfamily R, member 1 ...
OR8U8                 0.476   olfactory receptor, family 8, subfamily U, member 8 ...
OR8H1                 0.476   olfactory receptor, family 8, subfamily H, member 1 ...
OR8D1                 0.476   olfactory receptor, family 8, subfamily D, member 1 ...
OR5AS1                0.474   olfactory receptor, family 5, subfamily AS, member 1...
OR8D4                 0.471   olfactory receptor, family 8, subfamily D, member 4 ...
OR8G1                 0.471   olfactory receptor, family 8, subfamily G, member 1 ...
OR8K5                 0.469   olfactory receptor, family 8, subfamily K, member 5...
OR5T3                 0.462   olfactory receptor, family 5, subfamily T, member 3 ...
OR5L1                 0.461   olfactory receptor, family 5, subfamily L, member 1 ...
OR8K3                 0.459   olfactory receptor, family 8, subfamily K, member 3 ...
OR5W2                 0.457   olfactory receptor, family 5, subfamily W, member 2 ...
OR9I1                 0.455   olfactory receptor, family 9, subfamily I, member 1 ...
OR5AU1                0.455   olfactory receptor, family 5, subfamily AU, member 1...
OR5M11                0.455   olfactory receptor, family 5, subfamily M, member 11...
OR8D2                 0.454   olfactory receptor, family 8, subfamily D, member 2 ...
OR5A1                 0.454   olfactory receptor, family 5, subfamily A, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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