Search of human proteins with 145046269

Search of human proteins with 145046269

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|145046269 rotatin [Homo sapiens]
         (2226 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|145046269 rotatin [Homo sapiens]                                  4410   0.0  
gi|151301154 mucin 6, gastric [Homo sapiens]                           36   0.37 
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]                    35   0.63 
gi|18644734 beta catenin-like 1 [Homo sapiens]                         35   0.82 
gi|33620755 YEATS domain containing 2 [Homo sapiens]                   33   2.4  
gi|130980075 centromere protein J [Homo sapiens]                       33   3.1  
gi|53832026 IQ motif and Sec7 domain 2 isoform 2 [Homo sapiens]        33   3.1  
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]        33   3.1  
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ...    33   3.1  
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]                     33   3.1  
gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]      33   4.1  
gi|105990535 coagulation factor V precursor [Homo sapiens]             33   4.1  
gi|222144247 dynein heavy chain domain 1 isoform 2 [Homo sapiens]      33   4.1  
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             33   4.1  
gi|32996737 lin-9 homolog [Homo sapiens]                               33   4.1  
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    32   5.3  
gi|18201894 T-box 5 isoform 3 [Homo sapiens]                           32   5.3  
gi|18201892 T-box 5 isoform 1 [Homo sapiens]                           32   5.3  
gi|31652232 T-box 5 isoform 1 [Homo sapiens]                           32   5.3  
gi|27886667 potassium voltage-gated channel, subfamily H, member...    32   5.3  
gi|189011568 adenomatous polyposis coli [Homo sapiens]                 32   7.0  
gi|189011566 adenomatous polyposis coli [Homo sapiens]                 32   7.0  
gi|53759122 adenomatous polyposis coli [Homo sapiens]                  32   7.0  
gi|239740898 PREDICTED: hypothetical protein [Homo sapiens]            32   7.0  
gi|213512168 hypothetical protein LOC259308 [Homo sapiens]             32   7.0  
gi|89886490 hypothetical protein LOC750 [Homo sapiens]                 32   7.0  
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]                32   9.1  
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]             32   9.1  
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]    32   9.1  
gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sap...    32   9.1  

>gi|145046269 rotatin [Homo sapiens]
          Length = 2226

 Score = 4410 bits (11438), Expect = 0.0
 Identities = 2226/2226 (100%), Positives = 2226/2226 (100%)

Query: 1    MVLAGLIRKLGHQLAEIRERALKSILCKIEHNLICYADLIQERQLFLHLLEWFNFPSVPM 60
            MVLAGLIRKLGHQLAEIRERALKSILCKIEHNLICYADLIQERQLFLHLLEWFNFPSVPM
Sbjct: 1    MVLAGLIRKLGHQLAEIRERALKSILCKIEHNLICYADLIQERQLFLHLLEWFNFPSVPM 60

Query: 61   KEEVLNLLSRLVKYPPAVQHLVDVGAVEFLSKLRSNVEPNLQAEIDGILDGLFLLPSEVP 120
            KEEVLNLLSRLVKYPPAVQHLVDVGAVEFLSKLRSNVEPNLQAEIDGILDGLFLLPSEVP
Sbjct: 61   KEEVLNLLSRLVKYPPAVQHLVDVGAVEFLSKLRSNVEPNLQAEIDGILDGLFLLPSEVP 120

Query: 121  ALSSASYQTNQTELSKNPEILTGYFPQDKSNFQQMEVPPRPVVNQTVKCLKFSTFPWLPL 180
            ALSSASYQTNQTELSKNPEILTGYFPQDKSNFQQMEVPPRPVVNQTVKCLKFSTFPWLPL
Sbjct: 121  ALSSASYQTNQTELSKNPEILTGYFPQDKSNFQQMEVPPRPVVNQTVKCLKFSTFPWLPL 180

Query: 181  TTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLA 240
            TTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLA
Sbjct: 181  TTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLA 240

Query: 241  FGDGKHRLALQSVSCLQQLCMYLRNRLNFHRDPGFFSNKHDTVSQNSSLSYCHEARGTHH 300
            FGDGKHRLALQSVSCLQQLCMYLRNRLNFHRDPGFFSNKHDTVSQNSSLSYCHEARGTHH
Sbjct: 241  FGDGKHRLALQSVSCLQQLCMYLRNRLNFHRDPGFFSNKHDTVSQNSSLSYCHEARGTHH 300

Query: 301  SQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAASSSGSSSHAHVNSRISVHSPLDMGHID 360
            SQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAASSSGSSSHAHVNSRISVHSPLDMGHID
Sbjct: 301  SQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAASSSGSSSHAHVNSRISVHSPLDMGHID 360

Query: 361  LPELETEDTLELQFQQLSLPQFCVSILESAVPLLRTGSRQVIIRVLELLTEDMTLIGEAI 420
            LPELETEDTLELQFQQLSLPQFCVSILESAVPLLRTGSRQVIIRVLELLTEDMTLIGEAI
Sbjct: 361  LPELETEDTLELQFQQLSLPQFCVSILESAVPLLRTGSRQVIIRVLELLTEDMTLIGEAI 420

Query: 421  STDIWDDSSLFGIDMKEKLLLVLGALGETMCYHKSSISLEQPEVMLVHHRMAFISISLFA 480
            STDIWDDSSLFGIDMKEKLLLVLGALGETMCYHKSSISLEQPEVMLVHHRMAFISISLFA
Sbjct: 421  STDIWDDSSLFGIDMKEKLLLVLGALGETMCYHKSSISLEQPEVMLVHHRMAFISISLFA 480

Query: 481  VRLLQTLLPVEKASEFLSEPMSTALFLLSLDMPISLEYPNIHEAVVAYLEQLNSENYSIY 540
            VRLLQTLLPVEKASEFLSEPMSTALFLLSLDMPISLEYPNIHEAVVAYLEQLNSENYSIY
Sbjct: 481  VRLLQTLLPVEKASEFLSEPMSTALFLLSLDMPISLEYPNIHEAVVAYLEQLNSENYSIY 540

Query: 541  KRTAEAVYSIECTCNFLSDIGKEGEKNLLELVELADQALRSFSYHQHFPLIKEIISICSK 600
            KRTAEAVYSIECTCNFLSDIGKEGEKNLLELVELADQALRSFSYHQHFPLIKEIISICSK
Sbjct: 541  KRTAEAVYSIECTCNFLSDIGKEGEKNLLELVELADQALRSFSYHQHFPLIKEIISICSK 600

Query: 601  IWKSAQASPLLQGESQKVLLHMLSHPLPRVKAETYHCCLEITKECLGVHNVTKPVSSLCN 660
            IWKSAQASPLLQGESQKVLLHMLSHPLPRVKAETYHCCLEITKECLGVHNVTKPVSSLCN
Sbjct: 601  IWKSAQASPLLQGESQKVLLHMLSHPLPRVKAETYHCCLEITKECLGVHNVTKPVSSLCN 660

Query: 661  GIHFLLHPKVLYEISVFGIQEPESEVNTAAKAILLYLLQGRLMMTALTWNKFIESLCPVI 720
            GIHFLLHPKVLYEISVFGIQEPESEVNTAAKAILLYLLQGRLMMTALTWNKFIESLCPVI
Sbjct: 661  GIHFLLHPKVLYEISVFGIQEPESEVNTAAKAILLYLLQGRLMMTALTWNKFIESLCPVI 720

Query: 721  PILQGYADTEDPLGNCILLLSKASSDTEEMLPCTTRLKSMLRLLLVKKPSVRSLALKLLA 780
            PILQGYADTEDPLGNCILLLSKASSDTEEMLPCTTRLKSMLRLLLVKKPSVRSLALKLLA
Sbjct: 721  PILQGYADTEDPLGNCILLLSKASSDTEEMLPCTTRLKSMLRLLLVKKPSVRSLALKLLA 780

Query: 781  FHLTSEEGADTKRPLIDARVLSRVTDLFIGKKPIELRLDDRRELVIKLETVEKVYEIFTS 840
            FHLTSEEGADTKRPLIDARVLSRVTDLFIGKKPIELRLDDRRELVIKLETVEKVYEIFTS
Sbjct: 781  FHLTSEEGADTKRPLIDARVLSRVTDLFIGKKPIELRLDDRRELVIKLETVEKVYEIFTS 840

Query: 841  DDVDLVLRKSAAEQLAVIMQDIKMHAVVKKLCLIDKIIEYLNECVSQDGKVVECLVQPCL 900
            DDVDLVLRKSAAEQLAVIMQDIKMHAVVKKLCLIDKIIEYLNECVSQDGKVVECLVQPCL
Sbjct: 841  DDVDLVLRKSAAEQLAVIMQDIKMHAVVKKLCLIDKIIEYLNECVSQDGKVVECLVQPCL 900

Query: 901  TLLRKVLCGDPVMRVSLSQQSSLLTVLFRVSLIFHEDCSVVTEVGALFCLLLFDEVSRMD 960
            TLLRKVLCGDPVMRVSLSQQSSLLTVLFRVSLIFHEDCSVVTEVGALFCLLLFDEVSRMD
Sbjct: 901  TLLRKVLCGDPVMRVSLSQQSSLLTVLFRVSLIFHEDCSVVTEVGALFCLLLFDEVSRMD 960

Query: 961  MWSVNPSNKPSLPSVFSLPVSVFRRYHLPVHVIGHHAVSPYSIVLPLSADCLALKPVSDM 1020
            MWSVNPSNKPSLPSVFSLPVSVFRRYHLPVHVIGHHAVSPYSIVLPLSADCLALKPVSDM
Sbjct: 961  MWSVNPSNKPSLPSVFSLPVSVFRRYHLPVHVIGHHAVSPYSIVLPLSADCLALKPVSDM 1020

Query: 1021 LRIAWNLSWYHGSDNLLKQMNSETKTQEILDALKLSTEDILTLKITHMASGLQDCLHSIV 1080
            LRIAWNLSWYHGSDNLLKQMNSETKTQEILDALKLSTEDILTLKITHMASGLQDCLHSIV
Sbjct: 1021 LRIAWNLSWYHGSDNLLKQMNSETKTQEILDALKLSTEDILTLKITHMASGLQDCLHSIV 1080

Query: 1081 QAATHREVRAAVTRMSFYLLNDRLSLKGCPGPCGVTLKSLAWHTALNRFLQVLPACTEDE 1140
            QAATHREVRAAVTRMSFYLLNDRLSLKGCPGPCGVTLKSLAWHTALNRFLQVLPACTEDE
Sbjct: 1081 QAATHREVRAAVTRMSFYLLNDRLSLKGCPGPCGVTLKSLAWHTALNRFLQVLPACTEDE 1140

Query: 1141 KLLIDIIHFLNKLIKEQRKNSSLELLNWILELLLRHSANPLLDLLVLTESQAREETDDIR 1200
            KLLIDIIHFLNKLIKEQRKNSSLELLNWILELLLRHSANPLLDLLVLTESQAREETDDIR
Sbjct: 1141 KLLIDIIHFLNKLIKEQRKNSSLELLNWILELLLRHSANPLLDLLVLTESQAREETDDIR 1200

Query: 1201 TAVRQQLQKELIALFDTLLLNFMEVTDRKCSELLYVFQTQLALKLLQCLKVTDAPHFYGL 1260
            TAVRQQLQKELIALFDTLLLNFMEVTDRKCSELLYVFQTQLALKLLQCLKVTDAPHFYGL
Sbjct: 1201 TAVRQQLQKELIALFDTLLLNFMEVTDRKCSELLYVFQTQLALKLLQCLKVTDAPHFYGL 1260

Query: 1261 PSLERTLRGMANLTAFPGWSSHSPLTKPLDICVKYLSGLLEVITSFYVERGGNAMSFMGK 1320
            PSLERTLRGMANLTAFPGWSSHSPLTKPLDICVKYLSGLLEVITSFYVERGGNAMSFMGK
Sbjct: 1261 PSLERTLRGMANLTAFPGWSSHSPLTKPLDICVKYLSGLLEVITSFYVERGGNAMSFMGK 1320

Query: 1321 GVTKSTILCLLHLSHEMMAQAGSLEWMSLWFLPLGSHSEEHIPTQQGLAWLIPLWVDRDP 1380
            GVTKSTILCLLHLSHEMMAQAGSLEWMSLWFLPLGSHSEEHIPTQQGLAWLIPLWVDRDP
Sbjct: 1321 GVTKSTILCLLHLSHEMMAQAGSLEWMSLWFLPLGSHSEEHIPTQQGLAWLIPLWVDRDP 1380

Query: 1381 EVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFILQ 1440
            EVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFILQ
Sbjct: 1381 EVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFILQ 1440

Query: 1441 NLLVIPMPTEIIKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHCYLG 1500
            NLLVIPMPTEIIKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHCYLG
Sbjct: 1441 NLLVIPMPTEIIKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHCYLG 1500

Query: 1501 RCMFDLNFSAFDRNSESNDLNGLDDSFKFWRAPSRTSQDRDPSSLSTSETTVAPSLGSTE 1560
            RCMFDLNFSAFDRNSESNDLNGLDDSFKFWRAPSRTSQDRDPSSLSTSETTVAPSLGSTE
Sbjct: 1501 RCMFDLNFSAFDRNSESNDLNGLDDSFKFWRAPSRTSQDRDPSSLSTSETTVAPSLGSTE 1560

Query: 1561 FQPLVQSTTLLPEASHDQFVAQGHQESTSPRPPHDSSLSAPLPKLCVFVTPSLLSAMCSL 1620
            FQPLVQSTTLLPEASHDQFVAQGHQESTSPRPPHDSSLSAPLPKLCVFVTPSLLSAMCSL
Sbjct: 1561 FQPLVQSTTLLPEASHDQFVAQGHQESTSPRPPHDSSLSAPLPKLCVFVTPSLLSAMCSL 1620

Query: 1621 LDNLLTIAPRDTAKAFRQAHLIELLCSIADATLIQTCVQELRALLPSSPPAEHTQAQVSF 1680
            LDNLLTIAPRDTAKAFRQAHLIELLCSIADATLIQTCVQELRALLPSSPPAEHTQAQVSF
Sbjct: 1621 LDNLLTIAPRDTAKAFRQAHLIELLCSIADATLIQTCVQELRALLPSSPPAEHTQAQVSF 1680

Query: 1681 LLEYLSSLSRLLQSCLLVEPDLVIQDELVKPLITNIIGILTICTKDVLDKELISAFYHTW 1740
            LLEYLSSLSRLLQSCLLVEPDLVIQDELVKPLITNIIGILTICTKDVLDKELISAFYHTW
Sbjct: 1681 LLEYLSSLSRLLQSCLLVEPDLVIQDELVKPLITNIIGILTICTKDVLDKELISAFYHTW 1740

Query: 1741 THLFNLLAMLLRKAGAITLPFVTVALAKHWTAAIDMFCTCAGLSATCPALYTASLQFLSV 1800
            THLFNLLAMLLRKAGAITLPFVTVALAKHWTAAIDMFCTCAGLSATCPALYTASLQFLSV
Sbjct: 1741 THLFNLLAMLLRKAGAITLPFVTVALAKHWTAAIDMFCTCAGLSATCPALYTASLQFLSV 1800

Query: 1801 LLTEEAKGHLQAKSKTHLCCSPTVASLLDDSQENQKSLEQLSDVILQCYEGKSSKDILKR 1860
            LLTEEAKGHLQAKSKTHLCCSPTVASLLDDSQENQKSLEQLSDVILQCYEGKSSKDILKR
Sbjct: 1801 LLTEEAKGHLQAKSKTHLCCSPTVASLLDDSQENQKSLEQLSDVILQCYEGKSSKDILKR 1860

Query: 1861 VAANALMSLLAVSRRAQKHALKANLIDNCMEQMKHINAQLNLDSLRPGKAALKKKEDGVI 1920
            VAANALMSLLAVSRRAQKHALKANLIDNCMEQMKHINAQLNLDSLRPGKAALKKKEDGVI
Sbjct: 1861 VAANALMSLLAVSRRAQKHALKANLIDNCMEQMKHINAQLNLDSLRPGKAALKKKEDGVI 1920

Query: 1921 KELSIAMQLLRNCLYQNEECKEAALEAHLVPVLHSLWPWILMDDSLMQISLQLLCVYTAN 1980
            KELSIAMQLLRNCLYQNEECKEAALEAHLVPVLHSLWPWILMDDSLMQISLQLLCVYTAN
Sbjct: 1921 KELSIAMQLLRNCLYQNEECKEAALEAHLVPVLHSLWPWILMDDSLMQISLQLLCVYTAN 1980

Query: 1981 FPNGCSSLCWSSCGQHPVQATHRGAVSNSLMLCILKLASQMPLENTTVQQMVFMLLSNLA 2040
            FPNGCSSLCWSSCGQHPVQATHRGAVSNSLMLCILKLASQMPLENTTVQQMVFMLLSNLA
Sbjct: 1981 FPNGCSSLCWSSCGQHPVQATHRGAVSNSLMLCILKLASQMPLENTTVQQMVFMLLSNLA 2040

Query: 2041 LSHDCKGVIQKSNFLQNFLSLALPKGGNKHLSNLTILWLKLLLNISSGEDGQQMILRLDG 2100
            LSHDCKGVIQKSNFLQNFLSLALPKGGNKHLSNLTILWLKLLLNISSGEDGQQMILRLDG
Sbjct: 2041 LSHDCKGVIQKSNFLQNFLSLALPKGGNKHLSNLTILWLKLLLNISSGEDGQQMILRLDG 2100

Query: 2101 CLDLLTEMSKYKHKSSPLLPLLIFHNVCFSPANKPKILANEKVITVLAACLESENQNAQR 2160
            CLDLLTEMSKYKHKSSPLLPLLIFHNVCFSPANKPKILANEKVITVLAACLESENQNAQR
Sbjct: 2101 CLDLLTEMSKYKHKSSPLLPLLIFHNVCFSPANKPKILANEKVITVLAACLESENQNAQR 2160

Query: 2161 IGAAALWALIYNYQKAKTALKSPSVKRRVDEAYSLAKKTFPNSEANPLNAYYLKCLENLV 2220
            IGAAALWALIYNYQKAKTALKSPSVKRRVDEAYSLAKKTFPNSEANPLNAYYLKCLENLV
Sbjct: 2161 IGAAALWALIYNYQKAKTALKSPSVKRRVDEAYSLAKKTFPNSEANPLNAYYLKCLENLV 2220

Query: 2221 QLLNSS 2226
            QLLNSS
Sbjct: 2221 QLLNSS 2226


>gi|151301154 mucin 6, gastric [Homo sapiens]
          Length = 2439

 Score = 36.2 bits (82), Expect = 0.37
 Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 14/118 (11%)

Query: 1531 RAPSRTSQDRDPSSLSTSETTVAPSLGSTEFQ---PLV----QSTTLLPEASHDQFVAQG 1583
            R P   +     S L T  TT +P  GS+ F    P+     Q+TT  P  SH Q     
Sbjct: 1948 RTPVAHTTSASSSRLPTPFTTHSPPTGSSPFSSTGPMTATSFQTTTTYPTPSHPQTTLPT 2007

Query: 1584 HQESTSPRPPHDSSLSAPLPKLCVFVTPSLLSAMCSLLDNLL-TIAPRDTAKAFRQAH 1640
            H       PP  +SL  P     +  T + ++   S+      T+ P  T KA    H
Sbjct: 2008 HV------PPFSTSLVTPSTHTVIITTHTQMATSASIHSTPTGTVPPPTTLKATGSTH 2059


>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
          Length = 1163

 Score = 35.4 bits (80), Expect = 0.63
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 272 DPGFFSNKHDTVSQNSSLSYCHEARGTHHSQNPSPG----SSSPRPSVVGRTGQRPRGDG 327
           +P FF  +H    Q+S  +    A  T  SQ  S G     SS R S    +G    G  
Sbjct: 91  NPNFFEQRHGGSHQSSKWTPVGPAPSTSQSQKRSSGLQSGHSSQRTSAGSSSGTNSSGQR 150

Query: 328 QDWDAASSSGSSS-----HAHVNSRISVHSP 353
            D ++ ++SGSSS     H   +S+    SP
Sbjct: 151 HDRESYNNSGSSSRKKGQHGSEHSKSRSSSP 181


>gi|18644734 beta catenin-like 1 [Homo sapiens]
          Length = 563

 Score = 35.0 bits (79), Expect = 0.82
 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 16/161 (9%)

Query: 731 DPLGNCILLLSKASSDTEEMLPCTTRLKSMLRLLLVKKPSVRSLALKLLAFHLTSEEGAD 790
           D L +C++L    SS+ E  L        ++ L+L +K   RS ALK+L   +   EG D
Sbjct: 315 DSLCSCLML----SSNRERFLKGEGL--QLMNLMLREKKISRSSALKVLDHAMIGPEGTD 368

Query: 791 TKRPLIDARVLSRVTDLFIGKKPIELRLDDRRELVIKLETVEKVYEIFTSDDVDLVLRKS 850
                +D   L  +  LF+ K P +++         K+ T EK +E      +  +LR  
Sbjct: 369 NCHKFVDILGLRTIFPLFM-KSPRKIK---------KVGTTEKEHEEHVCSILASLLRNL 418

Query: 851 AAEQLAVIMQDIKMHAVVKKLCLIDKIIEYLNECVSQDGKV 891
             +Q   ++     +   K   L++   +YL      D K+
Sbjct: 419 RGQQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVADKKI 459


>gi|33620755 YEATS domain containing 2 [Homo sapiens]
          Length = 1422

 Score = 33.5 bits (75), Expect = 2.4
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 15/87 (17%)

Query: 1529 FWRAPSRTSQDRDPSSLSTSETTVAPSLGSTEFQPLVQSTTLLPEASHDQFVAQGHQEST 1588
            F+  PS  S +R P+ ++TS+     S G++ FQP+  S  ++P             +S 
Sbjct: 397  FYALPS--SLERTPTKMTTSQKVTFCSHGNSAFQPIASSCKIVP-------------QSQ 441

Query: 1589 SPRPPHDSSLSAPLPKLCVFVTPSLLS 1615
             P P        P+   C  V+ S +S
Sbjct: 442  VPNPESPGKSFQPITMSCKIVSGSPIS 468


>gi|130980075 centromere protein J [Homo sapiens]
          Length = 1338

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 34/158 (21%)

Query: 2052 SNFLQNFLSLALPKG-GNKHLSNLTILWLKLLLNISS----GEDGQQMILRLDGCLDLLT 2106
            S  +  F     PK   + HL N      +L LNIS     G++ +  +LR +  ++L T
Sbjct: 863  SELMMKFFPSLKPKPKSDSHLGN------ELKLNISQDQPPGDNARSQVLR-EKIIELET 915

Query: 2107 EMSKYKHKSSPLLPLLIFHNVCFSPANKPKILANEKVITVLAACLESENQNAQRIGAAAL 2166
            E+ K+K +++ L  L I            +  A EK+   +A   + E Q A+ +     
Sbjct: 916  EIEKFKAENASLAKLRI-----------ERESALEKLRKEIA---DFEQQKAKEL----- 956

Query: 2167 WALIYNYQKAKTALKSPSVKRRVDEAYSLAKKTFPNSE 2204
             A I  ++K +  ++    +R+V E Y+ A +TFP+ +
Sbjct: 957  -ARIEEFKKEE--MRKLQKERKVFEKYTTAARTFPDKK 991


>gi|53832026 IQ motif and Sec7 domain 2 isoform 2 [Homo sapiens]
          Length = 949

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%)

Query: 1842 SDVILQCYEGKSSKDILKRVAANALMSLLAVSRRAQKHALKANLIDNCMEQMKHINAQLN 1901
            S+  + C  G SS+D L+   A  L       +R  +H+  +   +N + Q +H    LN
Sbjct: 500  SNETINCSSGSSSRDSLREPPATGLCK--QTYQRETRHSWDSPAFNNDVVQRRHYRIGLN 557

Query: 1902 LDSLRPGKAALKKKEDGVIKELSIAM 1927
            L + +P K      E G + +  + +
Sbjct: 558  LFNKKPEKGIQYLIERGFLSDTPVGV 583


>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
          Length = 1488

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%)

Query: 1842 SDVILQCYEGKSSKDILKRVAANALMSLLAVSRRAQKHALKANLIDNCMEQMKHINAQLN 1901
            S+  + C  G SS+D L+   A  L       +R  +H+  +   +N + Q +H    LN
Sbjct: 705  SNETINCSSGSSSRDSLREPPATGLCK--QTYQRETRHSWDSPAFNNDVVQRRHYRIGLN 762

Query: 1902 LDSLRPGKAALKKKEDGVIKELSIAM 1927
            L + +P K      E G + +  + +
Sbjct: 763  LFNKKPEKGIQYLIERGFLSDTPVGV 788


>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
            sapiens]
          Length = 2542

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 1542 PSSLSTSETTVAPSLGSTEFQPLVQS---TTLLPEASHDQFVAQGHQESTSPRPPHDSSL 1598
            P+++ +S T+   SL S    P+      TT LP ++    ++    ES S  PP    +
Sbjct: 1972 PATVISSVTSTCSSLPSVSSAPITSGQAPTTFLPASTSQAQLSSQKMESFSAVPPTKEKV 2031

Query: 1599 SA---PLPKLCVFVTPSLLSAMCS 1619
            S    P+  LC   TPS  +  CS
Sbjct: 2032 STQDQPMANLC---TPSSTANSCS 2052


>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
          Length = 2617

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 1542 PSSLSTSETTVAPSLGSTEFQPLVQS---TTLLPEASHDQFVAQGHQESTSPRPPHDSSL 1598
            P+++ +S T+   SL S    P+      TT LP ++    ++    ES S  PP    +
Sbjct: 1972 PATVISSVTSTCSSLPSVSSAPITSGQAPTTFLPASTSQAQLSSQKMESFSAVPPTKEKV 2031

Query: 1599 SA---PLPKLCVFVTPSLLSAMCS 1619
            S    P+  LC   TPS  +  CS
Sbjct: 2032 STQDQPMANLC---TPSSTANSCS 2052


>gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]
          Length = 4753

 Score = 32.7 bits (73), Expect = 4.1
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 18/140 (12%)

Query: 2046 KGVIQKSNFLQNFLSLALPK--GGNKHLSNLTILWLKLLLNISSGEDGQQMILRLDGCLD 2103
            +G+ +   FL+N L LA+P    G  H+S       +LL  + S     Q + R    LD
Sbjct: 383  QGLHRLQKFLENHLLLAVPHFGAGLLHIS-------RLLQELHSVSWLPQELDRCYELLD 435

Query: 2104 LLTEMSKYKHKSSPLLPLLIFHNVCFSPANKPKILANEKVITVLAACLESENQNAQRI-- 2161
            L T +++ KHK+  LL   +  N+C S       L +E     +  CL+   QN  RI  
Sbjct: 436  LQTALAEEKHKALRLLHRCL--NLCTSILR----LVHEDTYH-MQQCLQERVQNCDRIRT 488

Query: 2162 GAAALWALIYNYQKAKTALK 2181
            G  +++     +++ +  LK
Sbjct: 489  GQGSIYLQRVQHKQLEQKLK 508


>gi|105990535 coagulation factor V precursor [Homo sapiens]
          Length = 2224

 Score = 32.7 bits (73), Expect = 4.1
 Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 19/181 (10%)

Query: 1490 LNQMVKHCYLGRCMFDLNFSAFDRNSE------SNDLNGLDDSFKFWRAPSRTSQDRDPS 1543
            L QM     L      L+FS  + + E      S +L+  + S    + P          
Sbjct: 1271 LGQMPLSPDLSHTTLSLDFSQTNLSPELSHMTLSPELSQTNLSPALGQMPISPDLSHTTL 1330

Query: 1544 SLSTSETTVAPSLGSTEFQPLVQSTTLLPEASHDQFVAQGHQESTSPRPPHDSSLSAPLP 1603
            SL  S+T ++P L  T   P +    L P+ SH        Q + SP     ++LS  L 
Sbjct: 1331 SLDFSQTNLSPELSQTNLSPALGQMPLSPDPSHTTLSLDLSQTNLSPE-LSQTNLSPDLS 1389

Query: 1604 KLCVFVTPSLLSAMCSLLDNLLTIAP----RDTAKAFRQAHL------IELLCSIADATL 1653
            ++ +F   S +     L  + +T++P     D +  F Q  L      + L   I+D TL
Sbjct: 1390 EMPLFADLSQIPLTPDL--DQMTLSPDLGETDLSPNFGQMSLSPDLSQVTLSPDISDTTL 1447

Query: 1654 I 1654
            +
Sbjct: 1448 L 1448



 Score = 32.3 bits (72), Expect = 5.3
 Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 18/152 (11%)

Query: 1537 SQDRDPSSLSTS--ETTVAPSLGSTEFQPLVQSTTLLPEASHDQFVAQGHQESTSPRPPH 1594
            S D   ++LS    +  ++P+LG     P +  TTL P+ SH        Q + SP    
Sbjct: 1205 SPDLSHTTLSPELIQRNLSPALGQMPISPDLSHTTLSPDLSHTTLSLDLSQTNLSPE-LS 1263

Query: 1595 DSSLSAPLPKLCVFVTPSLLSAMCSLLDNLLTIAPRDTAKAFRQAHLIELLCSIADATLI 1654
             ++LS  L ++   ++P L     SL  +   ++P             EL        L 
Sbjct: 1264 QTNLSPALGQMP--LSPDLSHTTLSLDFSQTNLSP-------------ELSHMTLSPELS 1308

Query: 1655 QTCVQELRALLPSSPPAEHTQAQVSFLLEYLS 1686
            QT +      +P SP   HT   + F    LS
Sbjct: 1309 QTNLSPALGQMPISPDLSHTTLSLDFSQTNLS 1340


>gi|222144247 dynein heavy chain domain 1 isoform 2 [Homo sapiens]
          Length = 597

 Score = 32.7 bits (73), Expect = 4.1
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 18/140 (12%)

Query: 2046 KGVIQKSNFLQNFLSLALPK--GGNKHLSNLTILWLKLLLNISSGEDGQQMILRLDGCLD 2103
            +G+ +   FL+N L LA+P    G  H+S       +LL  + S     Q + R    LD
Sbjct: 383  QGLHRLQKFLENHLLLAVPHFGAGLLHIS-------RLLQELHSVSWLPQELDRCYELLD 435

Query: 2104 LLTEMSKYKHKSSPLLPLLIFHNVCFSPANKPKILANEKVITVLAACLESENQNAQRI-- 2161
            L T +++ KHK+  LL   +  N+C S       L +E     +  CL+   QN  RI  
Sbjct: 436  LQTALAEEKHKALRLLHRCL--NLCTSILR----LVHEDTYH-MQQCLQERVQNCDRIRT 488

Query: 2162 GAAALWALIYNYQKAKTALK 2181
            G  +++     +++ +  LK
Sbjct: 489  GQGSIYLQRVQHKQLEQKLK 508


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 32.7 bits (73), Expect = 4.1
 Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 20/96 (20%)

Query: 273 PGFFSNKHDTVSQNS-SLSYCHEARGTHHSQNPSPGSSSPRPSVVGR-TG-QRPRGD--- 326
           PG  S++H + S +S SLS       +H+S + SP   SP+    GR TG QR  G    
Sbjct: 248 PGRRSHRHSSGSSHSPSLS-------SHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSP 300

Query: 327 ----GQDWDAASSSGSS---SHAHVNSRISVHSPLD 355
               G  W +   +G S   S AH     S HSP D
Sbjct: 301 SPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPD 336


>gi|32996737 lin-9 homolog [Homo sapiens]
          Length = 558

 Score = 32.7 bits (73), Expect = 4.1
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 482 RLLQTLLPVEKASEFLSEPMSTALFLLSLDMPISLEYPNIHEAVVAYLEQLNSENYSIYK 541
           RL + L+  ++  + L E  + A  L S  MPIS+E+   +  +V  LEQLN +   +  
Sbjct: 364 RLSKILMIKKEHIKKLREMNTEAEKLKSYSMPISIEFQRRYATIVLELEQLNKDLNKVLH 423

Query: 542 RTAEAVYSI 550
           +  +  Y +
Sbjct: 424 KVQQYCYEL 432


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
          Length = 1124

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 33/160 (20%)

Query: 1542 PSSLSTSETTVAPSLGSTEFQPLVQSTTLLPEASHDQFVAQGHQESTSP-RPPHDSSLSA 1600
            PS L+ S      SLGS   Q      T+ P  +     +     ST P  PP  + LS 
Sbjct: 404  PSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSL 463

Query: 1601 PL-PKLCVFVTPSLLSAMCSLLDNLLTIAPRDTAKAFRQAHLIELLCSIAD-------AT 1652
            P  P L   ++P++     S L + LTI            H ++ L S+A        ++
Sbjct: 464  PASPPLQTSLSPAV-----SPLSSPLTI------------HPLQALSSLASHSPQAPLSS 506

Query: 1653 LIQTCVQELRALLPSS---PPAEHTQAQVSFLLEYLSSLS 1689
            LI   ++   +L P S   PPA  T       LE L SL+
Sbjct: 507  LIMPPLETQSSLAPPSLQTPPASLTTPP----LENLPSLA 542


>gi|18201894 T-box 5 isoform 3 [Homo sapiens]
          Length = 468

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 18/63 (28%), Positives = 27/63 (42%)

Query: 583 SYHQHFPLIKEIISICSKIWKSAQASPLLQGESQKVLLHMLSHPLPRVKAETYHCCLEIT 642
           S H  F      +S  S +    Q    + G SQ +L     +PLP+  ++ YHC     
Sbjct: 219 SNHSPFSSESRALSTSSNLGSQYQCENGVSGPSQDLLPPPNPYPLPQEHSQIYHCTKRKE 278

Query: 643 KEC 645
           +EC
Sbjct: 279 EEC 281


>gi|18201892 T-box 5 isoform 1 [Homo sapiens]
          Length = 518

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 18/63 (28%), Positives = 27/63 (42%)

Query: 583 SYHQHFPLIKEIISICSKIWKSAQASPLLQGESQKVLLHMLSHPLPRVKAETYHCCLEIT 642
           S H  F      +S  S +    Q    + G SQ +L     +PLP+  ++ YHC     
Sbjct: 269 SNHSPFSSESRALSTSSNLGSQYQCENGVSGPSQDLLPPPNPYPLPQEHSQIYHCTKRKE 328

Query: 643 KEC 645
           +EC
Sbjct: 329 EEC 331


>gi|31652232 T-box 5 isoform 1 [Homo sapiens]
          Length = 518

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 18/63 (28%), Positives = 27/63 (42%)

Query: 583 SYHQHFPLIKEIISICSKIWKSAQASPLLQGESQKVLLHMLSHPLPRVKAETYHCCLEIT 642
           S H  F      +S  S +    Q    + G SQ +L     +PLP+  ++ YHC     
Sbjct: 269 SNHSPFSSESRALSTSSNLGSQYQCENGVSGPSQDLLPPPNPYPLPQEHSQIYHCTKRKE 328

Query: 643 KEC 645
           +EC
Sbjct: 329 EEC 331


>gi|27886667 potassium voltage-gated channel, subfamily H, member 8
            [Homo sapiens]
          Length = 1107

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 1541 DPSSLSTSETTVAPSLGSTEFQPLVQSTTLLPEASHDQFVAQGHQESTSPRPPHDSSLSA 1600
            DPSS+ +S         +     L  S +L    SH Q V +GH +      PH  S   
Sbjct: 962  DPSSVGSSPQRTGAHEQNPADSELYHSPSLDYSPSHYQVVQEGHLQFLRCISPHSDSTLT 1021

Query: 1601 PLPKLCVFVTPSLLSAMCS 1619
            PL      ++ +L S++CS
Sbjct: 1022 PLQS----ISATLSSSVCS 1036


>gi|189011568 adenomatous polyposis coli [Homo sapiens]
          Length = 2843

 Score = 32.0 bits (71), Expect = 7.0
 Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 19/192 (9%)

Query: 2004 GAVSNSLMLCILK-----LASQMPLENTTVQQMVFMLLSNLALSHD--CKGVIQKSNFLQ 2056
            G V+N   LC +K     L +Q+  E+  +QQ++  +L NL+   D   K  +++   ++
Sbjct: 511  GDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVK 570

Query: 2057 NFLSLALPKGGNKHLSNLTILWLKLLLNISSG-EDGQQMILRLDGCLDLLTEMSKYKHKS 2115
              +  AL       L ++    L  L N+S+   + +  I  +DG L  L     Y+ ++
Sbjct: 571  ALMECALEVKKESTLKSV----LSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQT 626

Query: 2116 SPLLPLL----IFHNVCFSPANKP---KILANEKVITVLAACLESENQNAQRIGAAALWA 2168
            + L  +     I  NV    A      +IL     +  L   L+S +          LW 
Sbjct: 627  NTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWN 686

Query: 2169 LIYNYQKAKTAL 2180
            L     K + AL
Sbjct: 687  LSARNPKDQEAL 698


>gi|189011566 adenomatous polyposis coli [Homo sapiens]
          Length = 2843

 Score = 32.0 bits (71), Expect = 7.0
 Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 19/192 (9%)

Query: 2004 GAVSNSLMLCILK-----LASQMPLENTTVQQMVFMLLSNLALSHD--CKGVIQKSNFLQ 2056
            G V+N   LC +K     L +Q+  E+  +QQ++  +L NL+   D   K  +++   ++
Sbjct: 511  GDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVK 570

Query: 2057 NFLSLALPKGGNKHLSNLTILWLKLLLNISSG-EDGQQMILRLDGCLDLLTEMSKYKHKS 2115
              +  AL       L ++    L  L N+S+   + +  I  +DG L  L     Y+ ++
Sbjct: 571  ALMECALEVKKESTLKSV----LSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQT 626

Query: 2116 SPLLPLL----IFHNVCFSPANKP---KILANEKVITVLAACLESENQNAQRIGAAALWA 2168
            + L  +     I  NV    A      +IL     +  L   L+S +          LW 
Sbjct: 627  NTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWN 686

Query: 2169 LIYNYQKAKTAL 2180
            L     K + AL
Sbjct: 687  LSARNPKDQEAL 698


>gi|53759122 adenomatous polyposis coli [Homo sapiens]
          Length = 2843

 Score = 32.0 bits (71), Expect = 7.0
 Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 19/192 (9%)

Query: 2004 GAVSNSLMLCILK-----LASQMPLENTTVQQMVFMLLSNLALSHD--CKGVIQKSNFLQ 2056
            G V+N   LC +K     L +Q+  E+  +QQ++  +L NL+   D   K  +++   ++
Sbjct: 511  GDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVK 570

Query: 2057 NFLSLALPKGGNKHLSNLTILWLKLLLNISSG-EDGQQMILRLDGCLDLLTEMSKYKHKS 2115
              +  AL       L ++    L  L N+S+   + +  I  +DG L  L     Y+ ++
Sbjct: 571  ALMECALEVKKESTLKSV----LSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQT 626

Query: 2116 SPLLPLL----IFHNVCFSPANKP---KILANEKVITVLAACLESENQNAQRIGAAALWA 2168
            + L  +     I  NV    A      +IL     +  L   L+S +          LW 
Sbjct: 627  NTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWN 686

Query: 2169 LIYNYQKAKTAL 2180
            L     K + AL
Sbjct: 687  LSARNPKDQEAL 698


>gi|239740898 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1542

 Score = 32.0 bits (71), Expect = 7.0
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 1543 SSLSTSETTVAPSLGS---TEFQPLVQSTTLLPEASHDQFVAQGHQESTSPRP 1592
            +S  +SETTVAP+ GS   T      ++TT+L +AS     +    E+T+P P
Sbjct: 19   ASSMSSETTVAPAAGSNTTTASTTGSETTTILIKASETTTASTAGSETTTPSP 71


>gi|213512168 hypothetical protein LOC259308 [Homo sapiens]
          Length = 1335

 Score = 32.0 bits (71), Expect = 7.0
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 9/103 (8%)

Query: 299 HHSQNPSPGSSS-PRPSVVGRTGQRPRGDGQDWDAASSSGSSSHAHVNSRISVHS----P 353
           H  Q P+P + + P P++   +G  P+  GQD D+ S              S+HS     
Sbjct: 387 HCQQTPNPMALALPSPALKALSGPHPQSGGQDNDSGSDLQQKYSQLFCGLPSLHSESLVA 446

Query: 354 LDMGHIDLPELETEDTLELQ----FQQLSLPQFCVSILESAVP 392
             MG   LP++E      L+    F +LS PQ        + P
Sbjct: 447 TFMGSQGLPKIENVPKPPLKDPFLFNELSFPQLLPKTSPQSAP 489


>gi|89886490 hypothetical protein LOC750 [Homo sapiens]
          Length = 117

 Score = 32.0 bits (71), Expect = 7.0
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 316 VGRTGQRPRG-DGQDWDAASSSGSSSHAHVNSRISVHSP 353
           VG     P+G   Q+W+A   +GSSSHA   ++ S+HSP
Sbjct: 68  VGSMATAPQGLSPQEWEADRETGSSSHAG-TTQCSIHSP 105


>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
          Length = 2017

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 43/196 (21%), Positives = 78/196 (39%), Gaps = 7/196 (3%)

Query: 1747 LAMLLRKAGAITLPFVTVALAKHWTAAIDMFCTCAGLSATCPALYTASLQFLSVLLTEEA 1806
            +++ L +A  + L   TV      T    + C   GL A   A   A +  L  L+ E  
Sbjct: 1    MSLGLARAQEVELTLETVIQ----TLESSVLCQEKGLGARDLA-QDAQITSLPALIREIV 55

Query: 1807 KGHLQAKSKTHLCCSPTVASLLDDSQENQKSLEQLSDVILQCYEGKSSKDILKRVAANAL 1866
              +L       L  +  +ASLL   +ENQ   ++LS V     + ++ +D L  +  NA+
Sbjct: 56   TRNLSQPESPVLLPATEMASLLSLQEENQLLQQELSRVEDLLAQSRAERDEL-AIKYNAV 114

Query: 1867 MSLLAVSRRAQKHALKANLIDNCMEQMKHINAQLNLDSLRPGKAALKKKEDGVIKELSIA 1926
               L  + R +   L+       + Q   +  QL  +     +  L+  ++G  ++  + 
Sbjct: 115  SERLEQALRLEPGELETQEPRGLVRQSVELRRQLQ-EEQASYRRKLQAYQEGQQRQAQLV 173

Query: 1927 MQLLRNCLYQNEECKE 1942
             +L    L   + C E
Sbjct: 174  QRLQGKILQYKKRCSE 189


>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
          Length = 360

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 271 RDPGFFSNKHDTVSQNSSLSYCHEARGTHHSQNPSPGS-SSPRPSVVGRTGQRPRGDGQD 329
           R  G  S K    S+  +   C  +       + +PG+ +SP P +  R+ Q+ R   + 
Sbjct: 138 RSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEASPSPCITERSKQKARRRTRS 197

Query: 330 WDAASSSGSSSHAHVNSRISVHS 352
             ++SSS SSS +  +S  S  S
Sbjct: 198 SSSSSSSSSSSSSSSSSSSSSSS 220


>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
          Length = 2608

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 26/90 (28%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 247  RLALQSVSCLQQLCMYLRNRLNFHRDPGFFSNKHDTVSQNSSLSYCHEARGTHHSQNPSP 306
            RL  Q V    +L    R      R+      KHD     SS S      G    +  S 
Sbjct: 1403 RLDTQEVGMRVRLAELQRRYKEKQRELARLQRKHDHERDESSRSPARRGPGRPRKRKHSS 1462

Query: 307  GSSSPRPSVVGRTGQRPRGDGQDWDAASSS 336
               +PRP     TG  PR DG+   A  +S
Sbjct: 1463 SLPAPRP-----TGPLPRSDGKKVKAVRTS 1487


>gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sapiens]
          Length = 1189

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 12/105 (11%)

Query: 270  HRDPGFFSNKHDTVSQNSSLSYCHEARGTHHSQNPSPGSSSPRPSVVGRTGQ---RPRGD 326
            HR P   +  H  V ++S     H ++G  H    +PGSS P  +    +G     P   
Sbjct: 974  HRLPN--TESHQVVMKDS-----HASKGAPHLPRSNPGSSQPSGAGTSNSGSGALPPYAP 1026

Query: 327  GQDWDAASSSGSSSHAHVNSRISVHSPLDMGHIDLPELETEDTLE 371
                 A    G+S+   V S IS++ P D G     EL T  + E
Sbjct: 1027 KLSSSAGLPLGTST--SVLSGISLYDPRDHGSSSTSELATASSGE 1069


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,006,392
Number of Sequences: 37866
Number of extensions: 3599784
Number of successful extensions: 10541
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 10459
Number of HSP's gapped (non-prelim): 102
length of query: 2226
length of database: 18,247,518
effective HSP length: 118
effective length of query: 2108
effective length of database: 13,779,330
effective search space: 29046827640
effective search space used: 29046827640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.