TBX5 25646

Name: TBX5	Sequence: fasta or formatted (518aa)		NCBI GI: 31652232
Description: T-box 5 isoform 1		Referenced in: T Box Family
Other entries for this name: alt mRNA [518aa] T-box 5 isoform 1 alt prot [468aa] T-box 5 isoform 3 alt prot [349aa] T-box 5 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 31 2 C cysteine 1.7 9 1 D aspartate 3.9 20 2 E glutamate 5.6 29 3 F phenylalanine 3.9 20 1 G glycine 6.2 32 1 H histidine 5.0 26 1 I isoleucine 2.5 13 2 K lysine 5.2 27 2 L leucine 6.6 34 2 M methionine 3.5 18 1 N asparagine 3.5 18 2 P proline 9.8 51 3 Q glutamine 6.0 31 3 R arginine 4.1 21 2 S serine 10.8 56 2 T threonine 5.8 30 2 V valine 5.2 27 2 W tryptophan 1.0 5 1 Y tyrosine 3.9 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 T-box 5 isoform 1 TBX5 1.000 T-box 5 isoform 1 TBX5 0.904 T-box 5 isoform 3 TBX5 0.622 T-box 5 isoform 2 TBX4 0.462 T-box 4 TBX3 0.213 T-box 3 protein isoform 1 TBX2 0.209 T-box 2 TBX1 0.205 T-box 1 isoform B TBX20 0.204 T-box transcription factor TBX20 TBX1 0.204 T-box 1 isoform C TBX1 0.203 T-box 1 isoform A TBX6 0.203 T-box 6 TBX3 0.202 T-box 3 protein isoform 2 TBX10 0.195 T-box 10 TBX18 0.191 T-box 18 TBX15 0.190 T-box 15 T 0.174 transcription factor T MGA 0.172 MAX gene associated TBX21 0.165 T-box 21 TBX22 0.165 T-box 22 isoform 1 TBX22 0.165 T-box 22 isoform 1 TBR1 0.162 T-box, brain, 1 TBX19 0.159 T-box 19 EOMES 0.158 eomesodermin TBX22 0.126 T-box 22 isoform 2 LOC642132 0.017 PREDICTED: similar to roundabout 1 isoform 1 LOC642132 0.017 PREDICTED: similar to roundabout 1 isoform 2 ROBO1 0.016 roundabout 1 isoform d ROBO1 0.016 roundabout 1 isoform c ROBO1 0.016 roundabout 1 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.