Guide to the Human Genome
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Name: DNHD1 Sequence: fasta or formatted (597aa) NCBI GI: 222144247
Description:

dynein heavy chain domain 1 isoform 2

Referenced in:

Dynein and Dynactin

Other entries for this name:
alt prot [4753aa] dynein heavy chain domain 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         35           2
 C cysteine            3.0         18           2
 D aspartate           3.9         23           2
 E glutamate           6.5         39           2
 F phenylalanine       3.9         23           2
 G glycine             3.5         21           2
 H histidine           4.5         27           3
 I isoleucine          2.8         17           1
 K lysine              4.4         26           2
 L leucine            16.1         96           3
 M methionine          1.3          8           1
 N asparagine          1.5          9           1
 P proline             6.0         36           2
 Q glutamine           8.0         48           2
 R arginine            5.5         33           2
 S serine              7.4         44           2
 T threonine           4.0         24           1
 V valine              7.0         42           2
 W tryptophan          2.2         13           2
 Y tyrosine            2.5         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynein heavy chain domain 1 isoform 2 
DNHD1                 0.998   dynein heavy chain domain 1 isoform 1 
DNAH6                 0.032   dynein, axonemal, heavy polypeptide 6 
DNAH14                0.013   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
DNAH14                0.013   dynein, axonemal, heavy polypeptide 14 isoform 2 [H...
EVC                   0.010   Ellis van Creveld syndrome protein 
ALOX12                0.009   arachidonate 12-lipoxygenase 
GLG1                  0.008   golgi apparatus protein 1 isoform 3 
GLG1                  0.008   golgi apparatus protein 1 isoform 2 
GLG1                  0.008   golgi apparatus protein 1 isoform 1 
SYNE2                 0.008   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.008   spectrin repeat containing, nuclear envelope 2 isof...
RTTN                  0.007   rotatin 
PI4KA                 0.006   phosphatidylinositol 4-kinase type 3 alpha isoform 1 ...
PI4KA                 0.006   phosphatidylinositol 4-kinase type 3 alpha isoform ...
OR52L1                0.006   olfactory receptor, family 52, subfamily L, member ...
AP3B2                 0.005   adaptor-related protein complex 3, beta 2 subunit [H...
MTRF1                 0.005   mitochondrial translational release factor 1 
JMY                   0.005   junction-mediating and regulatory protein 
PPP1R15B              0.004   protein phosphatase 1, regulatory subunit 15B [Homo...
POLA2                 0.004   DNA-directed DNA polymerase alpha 2 
HOOK1                 0.004   hook homolog 1 
CELSR3                0.004   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
C3orf23               0.004   hypothetical protein LOC285343 isoform 1 
TTF2                  0.004   transcription termination factor, RNA polymerase II ...
SLC26A10              0.004   solute carrier family 26, member 10 
ESPNL                 0.004   espin-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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