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Search of human proteins with 144922631
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|144922631 tigger transposable element derived 5 [Homo
sapiens]
(593 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|144922631 tigger transposable element derived 5 [Homo sapiens] 1229 0.0
gi|117938293 jerky isoform a [Homo sapiens] 164 2e-40
gi|23312392 tigger transposable element derived 2 [Homo sapiens] 160 4e-39
gi|117938295 jerky isoform b [Homo sapiens] 159 7e-39
gi|22547224 jerky homolog-like [Homo sapiens] 159 9e-39
gi|22325392 tigger transposable element derived 7 [Homo sapiens] 139 6e-33
gi|13569924 hypothetical protein LOC81789 [Homo sapiens] 130 3e-30
gi|22209001 hypothetical protein LOC200765 [Homo sapiens] 123 4e-28
gi|21735415 centromere protein B [Homo sapiens] 114 3e-25
gi|22219477 tigger transposable element derived 4 [Homo sapiens] 103 3e-22
gi|23312394 tigger transposable element derived 3 [Homo sapiens] 75 2e-13
gi|239755627 PREDICTED: similar to cag [Homo sapiens] 57 4e-08
gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo ... 57 4e-08
gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo ... 57 4e-08
gi|22027480 pogo transposable element with KRAB domain [Homo sap... 45 2e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 42 0.001
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 42 0.002
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 42 0.002
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 41 0.003
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 41 0.003
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 41 0.003
gi|56549694 enabled homolog isoform a [Homo sapiens] 40 0.005
gi|39930375 enabled homolog isoform b [Homo sapiens] 40 0.005
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 40 0.005
gi|157168329 formin 1 [Homo sapiens] 40 0.006
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 40 0.006
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 40 0.006
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 40 0.006
gi|160707881 formin 2 [Homo sapiens] 40 0.008
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 40 0.008
>gi|144922631 tigger transposable element derived 5 [Homo sapiens]
Length = 593
Score = 1229 bits (3180), Expect = 0.0
Identities = 593/593 (100%), Positives = 593/593 (100%)
Query: 1 MAFRKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEV 60
MAFRKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEV
Sbjct: 1 MAFRKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEV 60
Query: 61 GTQRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASH 120
GTQRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASH
Sbjct: 61 GTQRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASH 120
Query: 121 GWFWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEG 180
GWFWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEG
Sbjct: 121 GWFWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEG 180
Query: 181 GYGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKL 240
GYGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKL
Sbjct: 181 GYGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKL 240
Query: 241 KPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCL 300
KPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCL
Sbjct: 241 KPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCL 300
Query: 301 QQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGSS 360
QQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGSS
Sbjct: 301 QQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGSS 360
Query: 361 RAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLSWDLVQ 420
RAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLSWDLVQ
Sbjct: 361 RAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLSWDLVQ 420
Query: 421 AGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKCLAPEEV 480
AGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKCLAPEEV
Sbjct: 421 AGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKCLAPEEV 480
Query: 481 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAMGGGEDEEEATDYGGTSVPTAG 540
AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAMGGGEDEEEATDYGGTSVPTAG
Sbjct: 481 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAMGGGEDEEEATDYGGTSVPTAG 540
Query: 541 EAVRGLETALRWLENQDPREVGPLRLVQLRSLISMARRLGGIGHTPAGPYDGV 593
EAVRGLETALRWLENQDPREVGPLRLVQLRSLISMARRLGGIGHTPAGPYDGV
Sbjct: 541 EAVRGLETALRWLENQDPREVGPLRLVQLRSLISMARRLGGIGHTPAGPYDGV 593
>gi|117938293 jerky isoform a [Homo sapiens]
Length = 568
Score = 164 bits (415), Expect = 2e-40
Identities = 159/594 (26%), Positives = 247/594 (41%), Gaps = 88/594 (14%)
Query: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKL-RWFLEQLGGEVGT 62
R ++K+K+ R++ GE + ++ +++ V TL + +L R+F +
Sbjct: 17 RVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNKALE 76
Query: 63 QRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPE-CTFKASHG 121
QR+ + E +DR +Y WFL R GVP+SGP++ +A+ F Q+ E C F S G
Sbjct: 77 QRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVF--SGG 134
Query: 122 WFWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGG 181
W WR++ RHGI E A ++ A AE G
Sbjct: 135 WLWRFKARHGIKKLDASSEK-----QSADHQAAEQFCAFFRSLA------------AEHG 177
Query: 182 YGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKLK 241
EQ+Y+A TGL+W+ LP P G PG + DR+TVL+ AN TGSH+LK
Sbjct: 178 LSAEQVYNADETGLFWRCLPNPT-PEGGAVPGP-----KQGKDRLTVLMCANATGSHRLK 231
Query: 242 PLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCLQ 301
PL IG+ P + + P +Y+ +AW+ + + WF FVP V+ + R L
Sbjct: 232 PLAIGKCSGPRAFK--GIQHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLP 289
Query: 302 Q--KAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGS 359
+ KAVLL LDS A P+E + V +FL +
Sbjct: 290 EDSKAVLL---------------LDSSRA----------HPQEAELVSSNVFTIFLP--A 322
Query: 360 SRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRS-FMLKDMLYLAGLSWDL 418
S A + P+EQG+ +R+ +R ++ PL + + + D ++ +W+
Sbjct: 323 SVASLVQPMEQGI--------RRDFMRNFIN--PPVPLQGPHARYNMNDAIFSVACAWNA 372
Query: 419 VQAGSIERCW-LLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKC--- 474
V + R W L AF + + A+ H++ + + L C
Sbjct: 373 VPSHVFRRAWRKLWPSVAFAEGSSSEEELE-AECFPVKPHNKSFAHILELVKEGSSCPGQ 431
Query: 475 LAPEEVAEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAMGGGEDEEEATDYGGT 534
L + A W RE G P A PA S D++ D G
Sbjct: 432 LRQRQAASW---------GVAGREAEGGRPPAATSPAEVVWSSEKTPKADQDGGGDPGEG 482
Query: 535 SVPTAGEAVRGLETALRWLENQ---DPREVGPLRLVQ--LRSLISMARRLGGIG 583
+A + LR+ E Q +EVG LR ++ RS + RR G +G
Sbjct: 483 EEVAWEQAAVAFDAVLRFAERQPCFSAQEVGQLRALRAVFRSQQQVRRRRGALG 536
>gi|23312392 tigger transposable element derived 2 [Homo sapiens]
Length = 525
Score = 160 bits (404), Expect = 4e-39
Identities = 118/427 (27%), Positives = 196/427 (45%), Gaps = 50/427 (11%)
Query: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVG-T 62
R +IKDKL I++++ G + +G+ T+R K++ ++ + G +
Sbjct: 7 RVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVS 66
Query: 63 QRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGW 122
+RK M+ + EE+DR + WF + G+P+SG + QA+ F + G E F AS GW
Sbjct: 67 KRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDAL-GMEGDFNASSGW 125
Query: 123 FWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVK-EEPALPSGAGPLPDRAPAPPPPAEGG 181
R+++RHGI + G +K +E A G + +
Sbjct: 126 LTRFKQRHGIPK------------AAGKGTKLKGDETAAREFCGSFQEFV------EKEN 167
Query: 182 YGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKLK 241
EQIY A TGL+WK LP + D GC R +R+ ++ AN TG HKL
Sbjct: 168 LQPEQIYGADQTGLFWKCLPSRTLTLET-DQSTSGC--RSSRERIIIMCCANATGLHKLN 224
Query: 242 PLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCLQ 301
V+G+ P + + + P +Y AW+ + + R WF + FVP V+++L+ L
Sbjct: 225 LCVVGKAKKPRAFKGTDLSNLPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLL 284
Query: 302 QKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGSSR 361
+KAVLL+ PP RP E L + DG + V +L +
Sbjct: 285 EKAVLLLDFPP-------------------ARPN----EEMLSSDDGRIIVKYLPPNVT- 320
Query: 362 AHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLSWDLVQA 421
+ P+ QGV+A K+ Y+ LL+ + P F ++ + D +Y +W++V++
Sbjct: 321 -SLIQPMSQGVLATVKRYYRAGLLQKYMD-EGNDPKIFWKNLTVLDAIYEVSRAWNMVKS 378
Query: 422 GSIERCW 428
+I + W
Sbjct: 379 STITKAW 385
>gi|117938295 jerky isoform b [Homo sapiens]
Length = 556
Score = 159 bits (402), Expect = 7e-39
Identities = 153/577 (26%), Positives = 239/577 (41%), Gaps = 86/577 (14%)
Query: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKL-RWFLEQLGGEVGT 62
R ++K+K+ R++ GE + ++ +++ V TL + +L R+F +
Sbjct: 17 RVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNKALE 76
Query: 63 QRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPE-CTFKASHG 121
QR+ + E +DR +Y WFL R GVP+SGP++ +A+ F Q+ E C F S G
Sbjct: 77 QRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVF--SGG 134
Query: 122 WFWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGG 181
W WR++ RHGI E A ++ A AE G
Sbjct: 135 WLWRFKARHGIKKLDASSEK-----QSADHQAAEQFCAFFRSLA------------AEHG 177
Query: 182 YGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKLK 241
EQ+Y+A TGL+W+ LP P G PG + DR+TVL+ AN TGSH+LK
Sbjct: 178 LSAEQVYNADETGLFWRCLPNPT-PEGGAVPGP-----KQGKDRLTVLMCANATGSHRLK 231
Query: 242 PLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCLQ 301
PL IG+ P + + P +Y+ +AW+ + + WF FVP V+ + R L
Sbjct: 232 PLAIGKCSGPRAFK--GIQHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLP 289
Query: 302 Q--KAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGS 359
+ KAVLL LDS A P+E + V +FL +
Sbjct: 290 EDSKAVLL---------------LDSSRA----------HPQEAELVSSNVFTIFLP--A 322
Query: 360 SRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRS-FMLKDMLYLAGLSWDL 418
S A + P+EQG+ +R+ +R ++ PL + + + D ++ +W+
Sbjct: 323 SVASLVQPMEQGI--------RRDFMRNFIN--PPVPLQGPHARYNMNDAIFSVACAWNA 372
Query: 419 VQAGSIERCW-LLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKC--- 474
V + R W L AF + + A+ H++ + + L C
Sbjct: 373 VPSHVFRRAWRKLWPSVAFAEGSSSEEELE-AECFPVKPHNKSFAHILELVKEGSSCPGQ 431
Query: 475 LAPEEVAEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAMGGGEDEEEATDYGGT 534
L + A W RE G P A PA S D++ D G
Sbjct: 432 LRQRQAASW---------GVAGREAEGGRPPAATSPAEVVWSSEKTPKADQDGGGDPGEG 482
Query: 535 SVPTAGEAVRGLETALRWLENQ---DPREVGPLRLVQ 568
+A + LR+ E Q +EVG LR ++
Sbjct: 483 EEVAWEQAAVAFDAVLRFAERQPCFSAQEVGQLRALR 519
>gi|22547224 jerky homolog-like [Homo sapiens]
Length = 524
Score = 159 bits (401), Expect = 9e-39
Identities = 141/495 (28%), Positives = 218/495 (44%), Gaps = 77/495 (15%)
Query: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGG-EVGT 62
R +IKDKL I++++ G + +G+ T+R K++ K+ + +
Sbjct: 7 RVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSLLA 66
Query: 63 QRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGW 122
+RK M+ + EE+DRA+ WF R G P+SGP+ +AE F + G + F S GW
Sbjct: 67 KRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL-GMDGDFNPSAGW 125
Query: 123 FWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPD---RAPAPPPPAE 179
R+++RH I E +E A+ D R P
Sbjct: 126 LTRFKQRHSIREINIRNERLNG-----------DETAVEDFCNNFRDFIERENLQP---- 170
Query: 180 GGYGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGC---GRRWRGDRVTVLLAANLTG 236
EQIY+A TGL+WK LP + + G C G + +RVT++ AN TG
Sbjct: 171 -----EQIYNADETGLFWKCLPSRISVI------KGKCTVPGHKSIEERVTIMCCANATG 219
Query: 237 SHKLKPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLR 296
HKLK V+G+ P S + + P SY AW+ + R WF + FVP V+ YLR
Sbjct: 220 LHKLKLCVVGKAKKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLR 279
Query: 297 RSCLQQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEE-LQTPDGAVRVLFL 355
LQ+KAVLL+ + P P E L++ DG + +L
Sbjct: 280 SKGLQEKAVLLLDN------------------------SPTHPNENVLRSDDGQIFAKYL 315
Query: 356 SKGSSRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPL-DFMRSFMLKDMLYLAGL 414
+ A + P +QGV+A K+ Y+ LL+ + G+ L F + L D LY +
Sbjct: 316 P--PNVASLIQPSDQGVIATMKRNYRAGLLQ--NNLEEGNDLKSFWKKLTLLDALYEIAM 371
Query: 415 SWDLVQAGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAA--EHSRVLSDLTHLAALAY 472
+W+LV+ +I R W L E + + A AA +H++ L ++T
Sbjct: 372 AWNLVKPVTISRAWKKILPMVEEKESLDFDVEDISVATVAAILQHTKGLENVT------- 424
Query: 473 KCLAPEEVAEWLHLD 487
E + +WL +D
Sbjct: 425 ----TENLEKWLEVD 435
>gi|22325392 tigger transposable element derived 7 [Homo sapiens]
Length = 549
Score = 139 bits (351), Expect = 6e-33
Identities = 120/445 (26%), Positives = 203/445 (45%), Gaps = 80/445 (17%)
Query: 8 SIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWF-LEQLGGEVGTQRKK 66
++++K++ + R++ G SV +FG+ T K++ + F L+Q VG +++K
Sbjct: 11 NLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMPLVGAEKRK 70
Query: 67 MRL-ANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWR 125
A ++D AVY W+ R GVP+ G +QA AE FAR +G FKAS GW +R
Sbjct: 71 RTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFAR-CFG-RTDFKASTGWLFR 128
Query: 126 WQKRHGISSQRFYGEAGPPAPSPAPGP-------PVKEEPALPSGAGPLPDRAPAPPPPA 178
++ RH I +++ GE + S P +KEE +
Sbjct: 129 FRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLA---------------- 172
Query: 179 EGGYGDEQIYSASVTGLYWKLLPE--QAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTG 236
Q+YS T L+WK +PE QA+ PG ++ +R++ L AN G
Sbjct: 173 -------QLYSGDETDLFWKSMPENSQASRKDICLPG-----KKINKERLSAFLCANADG 220
Query: 237 SHKLKPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRY-- 294
+HKLK ++IG+ P S++ + P Y+ S D W +R L WFF+ FVP V+ +
Sbjct: 221 THKLKSIIIGKSKLPKSVKE-DTSTLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQL 279
Query: 295 --LRRSCLQQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRV 352
LR +A+LL+ CP+ +S E L + DG ++
Sbjct: 280 NVLRFHDEDVRALLLL--DSCPAHPSS---------------------ESLTSEDGRIKC 316
Query: 353 LFLSKGSSRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSP---------LDFMRSF 403
+F +S + P+ QGV+ + K+LY+ + L ++ S + ++ +
Sbjct: 317 MFFPHNTST--LIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDEQEKGDKGVSKIKIY 374
Query: 404 MLKDMLYLAGLSWDLVQAGSIERCW 428
+K ++ SW+ V+ +I W
Sbjct: 375 NIKSAIFNWAKSWEEVKQITIANAW 399
>gi|13569924 hypothetical protein LOC81789 [Homo sapiens]
Length = 521
Score = 130 bits (327), Expect = 3e-30
Identities = 121/490 (24%), Positives = 220/490 (44%), Gaps = 76/490 (15%)
Query: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQ 63
R+ +S+++K++ + V G+R+ V ++FG+ TL +LKD K + + VG Q
Sbjct: 9 RRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVRE--ASVGPQ 66
Query: 64 RKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWF 123
RK+MR A ++ID+AV+AWF + + ++G +I+ +A A + G + F+AS GW
Sbjct: 67 RKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANML-GYD-NFQASVGWL 124
Query: 124 WRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAG--PLPDRAPAPPPPAEGG 181
R++ RHGI+ + E + L +G G + +
Sbjct: 125 NRFRDRHGIALKAVCRE---------------DSDRLMNGLGIDKINEWHAGEIIKLIAD 169
Query: 182 YGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKLK 241
Y + I++A TG++++LLP+ GD GG + R+T L N +G+ K++
Sbjct: 170 YSPDDIFNADETGVFFQLLPQHTL-AAKGDHCRGG---KKAKQRLTALFCCNASGTEKMR 225
Query: 242 PLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCLQ 301
PL++GR P L+ N P YR + AW++R L W + V ++R+ +
Sbjct: 226 PLIVGRSASPHCLK--NIHSLPCDYRANQWAWMTRDLFNEWLMQ-----VDARMKRA--E 276
Query: 302 QKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGSSR 361
++ +LL+ + C + P E ++V +L S+
Sbjct: 277 RRILLLIDN---------------------CSAHNMLPHLE------RIQVGYLP--SNC 307
Query: 362 AHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLSWDLVQA 421
+ PL G++ K LY+ LL+ + + S + +K + + +W V+
Sbjct: 308 TAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSS--EDQEEVDIKQAIDMIAAAWWSVKP 365
Query: 422 GSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKCLAPEEV- 480
++ +CW +A P + + A A+E + L H A+A P EV
Sbjct: 366 STVVKCW---QKAGIVPMEFAECDTESA----ASEPDIAIEKLWHTVAIA--TCVPNEVN 416
Query: 481 -AEWLHLDDD 489
+++ DDD
Sbjct: 417 FQDFVTADDD 426
>gi|22209001 hypothetical protein LOC200765 [Homo sapiens]
Length = 591
Score = 123 bits (309), Expect = 4e-28
Identities = 119/504 (23%), Positives = 204/504 (40%), Gaps = 82/504 (16%)
Query: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQ 63
R + ++ KL+ I+ + G +A + R G+ T+ + + K FL+++
Sbjct: 12 RTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEK---FLKEVKSATPMN 68
Query: 64 RKKMRLANE--EEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAF------ARQIYGPECT 115
+ +R N ++++ + W +PLS LIQ +A R + E
Sbjct: 69 TRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEK 128
Query: 116 FKASHGWFWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPP 175
F+AS GWF R+++R + + GEA V+ + P + D
Sbjct: 129 FEASRGWFMRFKERSHFHNIKAQGEAA--------SADVEAAASYPEALAKIID------ 174
Query: 176 PPAEGGYGDEQIYSASVTGLYWKLLPEQA--APPGAGDPGAGGCGRRWRGDRVTVLLAAN 233
EGGY +QI++ T YWK +P + A PG + DR+T+LL AN
Sbjct: 175 ---EGGYTKQQIFNVDETAFYWKKMPSRTFIAREEKSVPGF-----KASKDRLTLLLGAN 226
Query: 234 LTGSHKLKPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKR 293
G KLKP++I +P +L+++ + P Y+++ A ++ L WF E F P V+
Sbjct: 227 AAGDFKLKPMLIYHSENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVET 286
Query: 294 YLRRSCLQQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVL 353
Y + K +LL+ + P P A M + + V+
Sbjct: 287 YCSEKKIPFKILLLIDNAP-SHPRALMEIYEE------------------------INVI 321
Query: 354 FLSKGSSRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLD---------FMRSFM 404
F+ ++ I P++QGV++ FK Y R A++ D F + F
Sbjct: 322 FMP--ANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDSDVSDGSGQSKLKTFWKGFT 379
Query: 405 LKDMLYLAGLSWDLVQAGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDL 464
+ D + SW+ V+ ++ W P +D G EE V +D+
Sbjct: 380 ILDAIKNIRDSWEEVKLSTLTGVW-----KKLIPTLIDDYEGFKTSVEE------VSADV 428
Query: 465 THLAALAYKCLAPEEVAEWLHLDD 488
+A + PE+V E L D
Sbjct: 429 VEIAKELELEVEPEDVTELLQSHD 452
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 114 bits (285), Expect = 3e-25
Identities = 112/433 (25%), Positives = 189/433 (43%), Gaps = 61/433 (14%)
Query: 4 RKAYSIKDKLQAIERVKGGE--RQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVG 61
R+ + ++K + I+ V+ R+ + R F +P TL LK++ + E+ G
Sbjct: 5 RRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAIL-ASERKYGVAS 63
Query: 62 TQRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHG 121
T RK +L+ ++++ + AWF +R G+P+ G +++ +A A ++ + F AS+G
Sbjct: 64 TCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDD--FTASNG 121
Query: 122 WFWRWQKRHGISS----QRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPP 177
W R+++RHG+ S R P AP P P+ SG RA PP
Sbjct: 122 WLDRFRRRHGVVSCSGVARARARNAAPRTPAAPASPAAV-PSEGSGGSTTGWRAREEQPP 180
Query: 178 AEG-GYGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGR-RWRGDRVTVLLAANLT 235
+ GY + ++SA+ T L++ LP+QAA GG GR R R++VLL AN
Sbjct: 181 SVAEGYASQDVFSATETSLWYDFLPDQAAGL------CGGDGRPRQATQRLSVLLCANAD 234
Query: 236 GSHKLKPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYL 295
GS KL PLV G+ P + Q P Y + ++ L + +K
Sbjct: 235 GSEKLPPLVAGKSAKPRA----GQAGLPCDYTANSKGGVTTQALAKY--------LKALD 282
Query: 296 RRSCLQQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFL 355
R + + VLL+ A + A + + +R V++ F
Sbjct: 283 TRMAAESRRVLLL--------AGRLAAQSLDTSGLR-----------------HVQLAFF 317
Query: 356 SKGSSRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLS 415
G+ PLE+GVV K Y++ +L A++ G ++ L + L+ +
Sbjct: 318 PPGTVH-----PLERGVVQQVKGHYRQAMLLKAMAALEGQDPSGLQ-LGLTEALHFVAAA 371
Query: 416 WDLVQAGSIERCW 428
W V+ I C+
Sbjct: 372 WQAVEPSDIAACF 384
>gi|22219477 tigger transposable element derived 4 [Homo sapiens]
Length = 512
Score = 103 bits (258), Expect = 3e-22
Identities = 130/582 (22%), Positives = 235/582 (40%), Gaps = 103/582 (17%)
Query: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQ 63
+K+ SI++K+ I V+ G+++A + ++G+ +L +K++ K+ E L +
Sbjct: 18 KKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESL--RFDPK 75
Query: 64 RKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWF 123
RK++R A +++ A+ W+ + VP++GP+++ +A FA+++ + FK S+GW
Sbjct: 76 RKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHND--FKCSNGWL 133
Query: 124 WRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYG 183
R++ R+G+ + P A G PV +P+ LP Y
Sbjct: 134 DRFKSRYGLVFR--------AQPVEATGVPV--DPSTVWYQNVLPYYL--------NDYH 175
Query: 184 DEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKLKPL 243
+ +++ TGL +++LP G + DR+T+++ N+ GS KL L
Sbjct: 176 PKNVFNIKETGLLYRMLPTNTFAFKGETCSVGKLCK----DRITLVVGTNMDGSEKLPLL 231
Query: 244 VIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGW---FFEEFVPGVKRYLRRSCL 300
VIG+ P + P Y + AW++ + W EEF
Sbjct: 232 VIGKKRTPHCFK--GLKSLPVCYEANRMAWMTSDVFEQWMRKLDEEF----------QAQ 279
Query: 301 QQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGSS 360
Q++ V+ V P ++ +++ F S SS
Sbjct: 280 QRRVVIFVESFPAHPEVKNLKSIE--------------------------LAFFPSCLSS 313
Query: 361 RAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLSWDLVQ 420
+ ++QGV+ + K Y+ L++ +S GS +F +F L D + L W V
Sbjct: 314 KC---IAMKQGVIKSLKIKYRHCLIKKFLSSVEGSK-EF--TFSLLDAVDTLHLCWRAVT 367
Query: 421 AGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKCLAPEEV 480
+I + + A F+ + GE AE L + + +
Sbjct: 368 PETIVKSY---EEAGFKSQKGESDITN-------AEKDTGLDLVADALGAGVEFPEGLSI 417
Query: 481 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAMGGGE------DEEEATDYGGT 534
E+ LDDD E C AAP + E DEE+ GT
Sbjct: 418 EEYAALDDD---LETCE---------AAPNGDSICTKESKSDETGFYTSDEEDDDGSPGT 465
Query: 535 S--VPTAGEAVRGLETALRWLENQDPREVGPLRLVQLRSLIS 574
+P+ EA+ L+T ++L +QD + L L + I+
Sbjct: 466 ELPLPSKSEAITALDTLKKFLRSQDMNDGLQNSLADLENFIN 507
>gi|23312394 tigger transposable element derived 3 [Homo sapiens]
Length = 471
Score = 74.7 bits (182), Expect = 2e-13
Identities = 130/554 (23%), Positives = 208/554 (37%), Gaps = 123/554 (22%)
Query: 6 AYSIKDKLQAIERVKGGER-QASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQR 64
A S+ +K+Q +E + + Q+ V R F V + K++ KL + G +R
Sbjct: 11 ALSLAEKIQVLELLDESKMSQSEVARRFQVSQPQISRICKNKEKL--LADWCSGTANRER 68
Query: 65 KKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFW 124
K+ R + ID A+ W+ R ++GP++ +A+ A I G + F S GW
Sbjct: 69 KRKRESKYSGIDEALLCWYHIARAKAWDVTGPMLLHKAKELA-DIMGQD--FVPSIGWLV 125
Query: 125 RWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGD 184
RW++R+ + +G APS P PP P L S A P + +
Sbjct: 126 RWKRRNNVG----FGARHVLAPSFPPEPP---PPGLTS---------QAQLPLSLKDFSP 169
Query: 185 EQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKLKPLV 244
E ++ + L ++ +P G C D+V VLL AN G+ K + L+
Sbjct: 170 EDVFGCAELPLLYRAVP----------GSFGAC------DQVQVLLCANSRGTEKRRVLL 213
Query: 245 IGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCLQQKA 304
G P + PASY PD L P L W + ++ R Q +
Sbjct: 214 GGLQAAPRCFFGIRSEALPASYH--PD--LGIPWLE-W--------LAQFDRDMGQQGRQ 260
Query: 305 VLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGSSRAHI 364
V L+ A +P L V++L L+ S+
Sbjct: 261 VALLLAARVVEELAGLPGLYH------------------------VKLLPLAASST---- 292
Query: 365 PAPLEQGVVAAFKQLYKRELL-RLAV--SCASGSPL-DFMRSFMLKDMLYLAGLSWDLVQ 420
PL VV AFK Y+ LL +LA S G+ L + + D L++A +W V
Sbjct: 293 TPPLPSSVVRAFKAHYRHRLLGKLAAIQSERDGTSLAEAGAGITVLDALHVASAAWAKVP 352
Query: 421 AGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKCLAPEEV 480
I ++ + G P + + +E V L+ EE
Sbjct: 353 PQLIFSSFI---------QEGLAPGKTPPSSHKTSEMPPVPGG-----------LSLEEF 392
Query: 481 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAMGGGEDEEEATDYGGTSVPTAG 540
+ ++ L+ + C+EE+G EDE+ + +PT
Sbjct: 393 SRFVDLEGEEPRSGVCKEEIGT--------------------EDEKGDREGAFEPLPTKA 432
Query: 541 EAVRGLETALRWLE 554
+A+R L T RW E
Sbjct: 433 DALRALGTLRRWFE 446
>gi|239755627 PREDICTED: similar to cag [Homo sapiens]
Length = 392
Score = 57.4 bits (137), Expect = 4e-08
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 8 SIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQ-RKK 66
SI K++ +E++ G + ++GV T+ K + KL F + ++ + RK
Sbjct: 67 SIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAESDEQILMKNRKT 126
Query: 67 MRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRW 126
+ A E++DR + W R +PL+G LI QA+ + ++ E + S GW ++
Sbjct: 127 LHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNEL-KIEGNCEYSTGWLQKF 185
Query: 127 QKRHGI 132
+KRHGI
Sbjct: 186 KKRHGI 191
>gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo
sapiens]
Length = 392
Score = 57.4 bits (137), Expect = 4e-08
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 8 SIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQ-RKK 66
SI K++ +E++ G + ++GV T+ K + KL F + ++ + RK
Sbjct: 67 SIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAESDEQILMKNRKT 126
Query: 67 MRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRW 126
+ A E++DR + W R +PL+G LI QA+ + ++ E + S GW ++
Sbjct: 127 LHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNEL-KIEGNCEYSTGWLQKF 185
Query: 127 QKRHGI 132
+KRHGI
Sbjct: 186 KKRHGI 191
>gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo
sapiens]
Length = 392
Score = 57.4 bits (137), Expect = 4e-08
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 8 SIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQ-RKK 66
SI K++ +E++ G + ++GV T+ K + KL F + ++ + RK
Sbjct: 67 SIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAESDEQILMKNRKT 126
Query: 67 MRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRW 126
+ A E++DR + W R +PL+G LI QA+ + ++ E + S GW ++
Sbjct: 127 LHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNEL-KIEGNCEYSTGWLQKF 185
Query: 127 QKRHGI 132
+KRHGI
Sbjct: 186 KKRHGI 191
>gi|22027480 pogo transposable element with KRAB domain [Homo
sapiens]
Length = 609
Score = 44.7 bits (104), Expect = 2e-04
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQ 63
R++Y KL +E + + FGV +R W K +P+L+ G +
Sbjct: 197 RRSYDAGFKLMVVEYAES-TNNCQAAKQFGVLEKNVRDWRKVKPQLQNAHAMRRAFRGPK 255
Query: 64 RKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWF 123
+ L +D+ V + ++ G P++ +Q +A A+++ PE FKAS GW
Sbjct: 256 NGRFAL-----VDQRVAEYVRYMQAKGDPITREAMQLKALEIAQEMNIPEKGFKASLGWC 310
Query: 124 WRWQKRHGIS 133
R +R+ +S
Sbjct: 311 RRMMRRYDLS 320
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 42.4 bits (98), Expect = 0.001
Identities = 32/96 (33%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 132 ISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPA-----------PPPPAEG 180
I + F G A PPAP+ AP PP PA P+ A P P APA PP A
Sbjct: 238 IQTPPFVGAAAPPAPA-APSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA 296
Query: 181 GYGDEQIYSASVTGLYWKLLPEQAAPPG-AGDPGAG 215
+ G P P G +G PG G
Sbjct: 297 VPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPG 332
Score = 39.7 bits (91), Expect = 0.008
Identities = 33/116 (28%), Positives = 44/116 (37%), Gaps = 16/116 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTGLYWKLL 200
AGPP +PA PP + +GA P P A P G G +A G+ +
Sbjct: 288 AGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESP 347
Query: 201 PE--QAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKLKPLVIGRLPDPPSL 254
QAAPP A A G A+ S + P + G LP P ++
Sbjct: 348 KRVVQAAPPAAQTLAASG--------------PASTAASMVIGPTMQGALPSPAAV 389
Score = 36.2 bits (82), Expect = 0.087
Identities = 59/223 (26%), Positives = 71/223 (31%), Gaps = 44/223 (19%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPP-----PPAEGGYGD-EQIYSASVTGLY 196
PPA PG + P PS PL PAPP PP EG G + +A+
Sbjct: 90 PPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAG 149
Query: 197 WKLLPEQAAPP----------GAG-DPGAGGCGRRWRGDRVTVLLAANLTGSHKLKPLVI 245
+ P A P G G PG G G A L GS L
Sbjct: 150 PEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLN--- 206
Query: 246 GRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCLQQKAV 305
HH + P A L P + PG + +Q
Sbjct: 207 ---------SHHAAAPAVSLVNNGPAALLPLP-------KPAAPG-------TVIQTPPF 243
Query: 306 LLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDG 348
+ A PP P+ A S PA + AP P P P L P G
Sbjct: 244 VGAAAPPAPA-APSPPAAPAPAAPAAAPPPPPPAPATLARPPG 285
Score = 30.4 bits (67), Expect = 4.8
Identities = 41/131 (31%), Positives = 49/131 (37%), Gaps = 34/131 (25%)
Query: 139 GEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAE---GGYGDEQIYSASVTGL 195
G+ GP A + AP P VK E P R PPA G ++ V G
Sbjct: 327 GQPGPGAAAAAPAPGVKAES---------PKRVVQAAPPAAQTLAASGPASTAASMVIGP 377
Query: 196 YWK-LLPEQAA--PPGAGDP-----GAGGCGRRWRGDRVTVLLAANLTGSHK-----LKP 242
+ LP AA PP G P GA G VT L+ T + L P
Sbjct: 378 TMQGALPSPAAVPPPAPGTPTGLPKGAAGA--------VTQSLSRTPTATTSGIRATLTP 429
Query: 243 LVIG-RLPDPP 252
V+ RLP PP
Sbjct: 430 TVLAPRLPQPP 440
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 42.0 bits (97), Expect = 0.002
Identities = 31/85 (36%), Positives = 33/85 (38%), Gaps = 17/85 (20%)
Query: 135 QRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTG 194
+R GPPAP PA GPP P P G P P P+ P A G G
Sbjct: 154 RRVSNAGGPPAP-PAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGG--------- 203
Query: 195 LYWKLLPEQAAP-PGAGDPGAGGCG 218
P A P P A PG GG G
Sbjct: 204 ------PPPAPPLPAAQGPGGGGAG 222
Score = 30.8 bits (68), Expect = 3.7
Identities = 26/87 (29%), Positives = 32/87 (36%), Gaps = 19/87 (21%)
Query: 490 GGPPEGCREEVGPALPPAAPPAPASLPSAM-------GGGE------DEEEATDYGGTSV 536
GGPP GP PP PP P PS + GGG + GG
Sbjct: 168 GGPPP----PPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQGPGGGGAGA 223
Query: 537 PTAGEAVRGLETALRWLENQDPREVGP 563
P A+ G + LR + Q+ GP
Sbjct: 224 PGLAAAIAGAK--LRKVSKQEEASGGP 248
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 41.6 bits (96), Expect = 0.002
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 15/97 (15%)
Query: 131 GISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAP--------PPPAEGGY 182
G ++ ++ G PPAP P P PP PA P+ + P +P P P + GY
Sbjct: 767 GAAAPQYPGRGPPPAPPPPPPPP--RAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGY 824
Query: 183 GDEQIYSASVT-----GLYWKLLPEQAAPPGAGDPGA 214
E +S + +P APP DPGA
Sbjct: 825 ETETPFSPEGAFPGGGAAEEEGVPRPRAPPEPPDPGA 861
Score = 33.5 bits (75), Expect = 0.57
Identities = 24/79 (30%), Positives = 28/79 (35%)
Query: 140 EAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTGLYWKL 199
E G P P P PP P P GPLP P P EQ+ + + L
Sbjct: 844 EEGVPRPRAPPEPPDPGAPRPPPDPGPLPLPGPREKPTFVVQVSTEQLLMSLREDVTRNL 903
Query: 200 LPEQAAPPGAGDPGAGGCG 218
L E+ A P G G
Sbjct: 904 LGEKGATARETGPRKAGRG 922
Score = 30.0 bits (66), Expect = 6.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 144 PAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPP 177
P PA PP +P + + A P R P P PP
Sbjct: 750 PMAPPASAPPEFLDPLMGAAAPQYPGRGPPPAPP 783
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 41.2 bits (95), Expect = 0.003
Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 28/94 (29%)
Query: 139 GEAGPPAPSPAPGP------PVKEEP----ALPSGAGPLPDRAPAPPPPAEGGYGDEQIY 188
G GPP P+ APGP P KE P P G + DR PA PP G GD
Sbjct: 915 GRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGD---- 970
Query: 189 SASVTGLYWKLLPEQAAPPGA-GDPG-AGGCGRR 220
P + PG G PG AG G+R
Sbjct: 971 ------------PGEDGQPGPDGPPGPAGTTGQR 992
Score = 32.0 bits (71), Expect = 1.6
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 25/86 (29%)
Query: 135 QRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTG 194
Q G+ G P+ PG EP P GP+ R P PP G G+
Sbjct: 224 QGLQGQQGGAGPTGPPG-----EPGDPGPMGPIGSRGPEGPPGKPGEDGE---------- 268
Query: 195 LYWKLLPEQAAPPG----AGDPGAGG 216
P + PG AG PGA G
Sbjct: 269 ------PGRNGNPGEVGFAGSPGARG 288
Score = 31.2 bits (69), Expect = 2.8
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 139 GEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGY-GDEQIYSASVTGLYW 197
G +GP P G ++ P P+G LP P PP EGG GD+ + G
Sbjct: 651 GPSGPVGPPGLAGERGEQGPPGPTGFQGLPG---PPGPPGEGGKPGDQGV--PGDPGAVG 705
Query: 198 KLLP--EQAAPPGAGDPGAGG 216
L P E+ P G+PG G
Sbjct: 706 PLGPRGERGNPGERGEPGITG 726
Score = 30.8 bits (68), Expect = 3.7
Identities = 33/109 (30%), Positives = 40/109 (36%), Gaps = 20/109 (18%)
Query: 139 GEAGPPAPSPAPG----------PPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIY 188
GE GPP P +PG P K P +GP P P +G G + I
Sbjct: 405 GETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIR 464
Query: 189 ----SASVTGLYWKLLPE-QAAPPG----AGDPGAGGCGRRWRGDRVTV 228
V G + P+ + P G G PG G R RGD TV
Sbjct: 465 GQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEG-KRGPRGDPGTV 512
Score = 30.8 bits (68), Expect = 3.7
Identities = 28/86 (32%), Positives = 32/86 (37%), Gaps = 18/86 (20%)
Query: 139 GEAGPPAPSPAPGPPVKEEPALPSG----AGPLPDRAPAPPPPAEGGYGDEQIYSASVTG 194
G GPP + PG + P P+G AGPL + PP G G G
Sbjct: 900 GTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSH--------G 951
Query: 195 LYWKLLPEQAAPPGA----GDPGAGG 216
P A PPG GDPG G
Sbjct: 952 RVGDRGP--AGPPGGPGDKGDPGEDG 975
Score = 30.4 bits (67), Expect = 4.8
Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 17/90 (18%)
Query: 139 GEAGPPAPSPAPGPPVKEEPALPSGA----GPLPDRAPAPPPPAEGGYG-------DEQI 187
G G P S PG P + A P+GA GP R PP G G D
Sbjct: 369 GPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTP 428
Query: 188 YSASVTGLYWKLLPEQAAPPG-AGDPGAGG 216
+ TG P + PPG AG PG+ G
Sbjct: 429 GAKGPTG-----SPGTSGPPGSAGPPGSPG 453
Score = 29.6 bits (65), Expect = 8.2
Identities = 26/78 (33%), Positives = 29/78 (37%), Gaps = 19/78 (24%)
Query: 139 GEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQ-IYSASVTGLYW 197
GEAGP P PGPP GP P PP GD Y S+
Sbjct: 1206 GEAGPEGPPGEPGPP-----------GP-----PGPPGHLTAALGDIMGHYDESMPDPLP 1249
Query: 198 KLLPEQAAPPGAG--DPG 213
+ +QAAP DPG
Sbjct: 1250 EFTEDQAAPDDKNKTDPG 1267
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 41.2 bits (95), Expect = 0.003
Identities = 33/76 (43%), Positives = 34/76 (44%), Gaps = 21/76 (27%)
Query: 142 GPPAPSPAPGPPVKEEPA-LPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTGLYWKLL 200
GPP SP P KEEP LP+ GPLP P PPPP G VT L
Sbjct: 815 GPPTASPPV--PAKEEPEELPAAPGPLPPPPP-PPPPVPG----------PVT-----LP 856
Query: 201 PEQAAPPGAGDPGAGG 216
P Q P G PG GG
Sbjct: 857 PPQLVPEGT--PGGGG 870
Score = 30.0 bits (66), Expect = 6.3
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Query: 143 PPAPSPAPGPPVKEEPALPS-----GAGPLPDRAPAP 174
P APSP PP +PS AGP+P P P
Sbjct: 654 PEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMP 690
Score = 29.6 bits (65), Expect = 8.2
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 143 PPAPSPAPGP-----PVKEEPALPSGAGPLPDRAPAPPPPA 178
PP P P+ G P+ +PS AGP+P P PP A
Sbjct: 667 PPGPMPSVGSMPSAGPMPSAGPMPS-AGPVPSARPGPPTTA 706
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTGLYWKLLPE 202
PP P+P P PP+ E + P P+ AP P P A S S T LY + PE
Sbjct: 34 PPPPAPPPAPPLLSEASPEPIPEPCPELAPGPCPEAT---------SESATELYTEPTPE 84
Query: 203 QAAPPGA 209
A P +
Sbjct: 85 PATEPAS 91
Score = 29.6 bits (65), Expect = 8.2
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 141 AGPPAPSPA--PGPPVKEEPALPSGAGPLPDRAPAPPP 176
A PAP PA P P EPA P + AP P P
Sbjct: 90 ASEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPTP 127
Score = 29.6 bits (65), Expect = 8.2
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 141 AGPPAPSPAPGPPVKE------EPALPSGAGPLPDRAPAPPP 176
A PAP PAP P + EPAL S P P+ P P
Sbjct: 106 ATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAP 147
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 40.4 bits (93), Expect = 0.005
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 142 GPPAPSPAPG---PPVKEEPALPSGAGPLPDRAPAPPPPAEG 180
GPP P P P PP P LP+ P P PAPP PA G
Sbjct: 335 GPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASG 376
Score = 39.3 bits (90), Expect = 0.010
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 143 PPAPSPAPGPPVKEE-PALPSGAGPLPDRAPAPPPP 177
PP P P P PP+ P P PLP++ P PPPP
Sbjct: 331 PPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPP 366
Score = 38.9 bits (89), Expect = 0.013
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 139 GEAGPPAPSPAPGPPVKEEPALPSGAGP-----LPDRAPAPPPP 177
G PP P P P P + ALP GP LP P PPPP
Sbjct: 309 GPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPP 352
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 40.4 bits (93), Expect = 0.005
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 142 GPPAPSPAPG---PPVKEEPALPSGAGPLPDRAPAPPPPAEG 180
GPP P P P PP P LP+ P P PAPP PA G
Sbjct: 335 GPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASG 376
Score = 39.3 bits (90), Expect = 0.010
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 143 PPAPSPAPGPPVKEE-PALPSGAGPLPDRAPAPPPP 177
PP P P P PP+ P P PLP++ P PPPP
Sbjct: 331 PPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPP 366
Score = 38.9 bits (89), Expect = 0.013
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 139 GEAGPPAPSPAPGPPVKEEPALPSGAGP-----LPDRAPAPPPP 177
G PP P P P P + ALP GP LP P PPPP
Sbjct: 309 GPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPP 352
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 40.4 bits (93), Expect = 0.005
Identities = 27/79 (34%), Positives = 28/79 (35%), Gaps = 13/79 (16%)
Query: 139 GEAGPPAPSPAPGPPVKEEPALPSGAG--PLPDRAPAPPPPAEGGYGDEQIYSASVTGLY 196
G GPP P P P P GAG P+P P PPPP G G
Sbjct: 363 GRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAP---------- 412
Query: 197 WKLLPEQAAPPGAGDPGAG 215
LP P G PG G
Sbjct: 413 -PPLPPALVPAGGLAPGGG 430
Score = 35.8 bits (81), Expect = 0.11
Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 20/84 (23%)
Query: 143 PPAPSPA------PGPPVKEE--------PALPSGAGPLPDRAPAPPPPAEGGYGDEQIY 188
PP P P+ P PP+ P +P G P P PPPP GG
Sbjct: 314 PPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPPP 373
Query: 189 SASVTGLYWKLLPEQAAPPGAGDP 212
+ +G P PPGAG P
Sbjct: 374 ATGRSG------PLPPPPPGAGGP 391
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 40.0 bits (92), Expect = 0.006
Identities = 27/72 (37%), Positives = 27/72 (37%), Gaps = 28/72 (38%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTGLYWKLL 200
AGPP P P P PP PS AGP P P PPPP L
Sbjct: 676 AGPPLPPPPPPPPPLPP---PSSAGPPP---PPPPPP----------------------L 707
Query: 201 PEQAAPPGAGDP 212
P APP G P
Sbjct: 708 PNSPAPPNPGGP 719
Score = 38.5 bits (88), Expect = 0.018
Identities = 19/45 (42%), Positives = 19/45 (42%)
Query: 139 GEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYG 183
G PP P P P P P P A P P AP PPP G G
Sbjct: 697 GPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGLFFGLG 741
Score = 38.1 bits (87), Expect = 0.023
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAGPLPDRAP---APPPP 177
AGPP P P PP+ PA P+ GP P P APPPP
Sbjct: 696 AGPPPPPPP--PPLPNSPAPPNPGGPPPAPPPPGLAPPPP 733
Score = 32.3 bits (72), Expect = 1.3
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 11/56 (19%)
Query: 127 QKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPP-PPAEGG 181
Q G++S + +A PP P+ P PP LPSG G L +PAPP PP G
Sbjct: 632 QPMEGMASNQ--QKALPPPPASIPPPP-----PLPSGLGSL---SPAPPMPPVSAG 677
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 40.0 bits (92), Expect = 0.006
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDR-APAPPPP 177
PP P PAPGPP ++ + P G PLP + APPPP
Sbjct: 141 PPPPGPAPGPP--QDISEPPGGSPLPSPPSTAPPPP 174
Score = 34.7 bits (78), Expect = 0.25
Identities = 16/35 (45%), Positives = 17/35 (48%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPP 177
PP SP P PP P P P P + APPPP
Sbjct: 157 PPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPP 191
Score = 33.1 bits (74), Expect = 0.74
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 129 RHGISSQRFYGEAGPPAPSPA---PGPPV-KEEPALPSGAGPLPDRAPAPPPPA 178
R G S + AG P P+P P PP+ P LP A PLP A PPA
Sbjct: 375 RLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPA 428
Score = 29.6 bits (65), Expect = 8.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPP 177
PP+ +P P P + E P PS A P P A PP
Sbjct: 166 PPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPP 200
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 40.0 bits (92), Expect = 0.006
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDR-APAPPPP 177
PP P PAPGPP ++ + P G PLP + APPPP
Sbjct: 141 PPPPGPAPGPP--QDISEPPGGSPLPSPPSTAPPPP 174
Score = 34.7 bits (78), Expect = 0.25
Identities = 16/35 (45%), Positives = 17/35 (48%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPP 177
PP SP P PP P P P P + APPPP
Sbjct: 157 PPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPP 191
Score = 33.1 bits (74), Expect = 0.74
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 129 RHGISSQRFYGEAGPPAPSPA---PGPPV-KEEPALPSGAGPLPDRAPAPPPPA 178
R G S + AG P P+P P PP+ P LP A PLP A PPA
Sbjct: 375 RLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPA 428
Score = 29.6 bits (65), Expect = 8.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPP 177
PP+ +P P P + E P PS A P P A PP
Sbjct: 166 PPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPP 200
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 40.0 bits (92), Expect = 0.006
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDR-APAPPPP 177
PP P PAPGPP ++ + P G PLP + APPPP
Sbjct: 141 PPPPGPAPGPP--QDISEPPGGSPLPSPPSTAPPPP 174
Score = 34.7 bits (78), Expect = 0.25
Identities = 16/35 (45%), Positives = 17/35 (48%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPP 177
PP SP P PP P P P P + APPPP
Sbjct: 157 PPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPP 191
Score = 33.1 bits (74), Expect = 0.74
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 129 RHGISSQRFYGEAGPPAPSPA---PGPPV-KEEPALPSGAGPLPDRAPAPPPPA 178
R G S + AG P P+P P PP+ P LP A PLP A PPA
Sbjct: 375 RLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPA 428
Score = 29.6 bits (65), Expect = 8.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 143 PPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPP 177
PP+ +P P P + E P PS A P P A PP
Sbjct: 166 PPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPP 200
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 39.7 bits (91), Expect = 0.008
Identities = 29/79 (36%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPA---PPPPAEGGYGDEQIYSASVTGL-Y 196
AG P P P PG + P LP PLP P PPPP G G G+
Sbjct: 940 AGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 999
Query: 197 WKLLPEQAAPPGAGDPGAG 215
LP PP PGAG
Sbjct: 1000 PPPLPGAGIPPPPPLPGAG 1018
Score = 37.4 bits (85), Expect = 0.039
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP GAG PLP A PPPP G
Sbjct: 918 AGIPPPPPLPGAGILPLPPLP-GAGIPPPPPLPGAAIPPPPPLPG 961
Score = 37.0 bits (84), Expect = 0.051
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP GAG PLP PPPP G
Sbjct: 984 AGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPG 1027
Score = 37.0 bits (84), Expect = 0.051
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP GAG PLP PPPP G
Sbjct: 995 AGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPG 1038
Score = 37.0 bits (84), Expect = 0.051
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP GAG PLP PPPP G
Sbjct: 1006 AGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPG 1049
Score = 37.0 bits (84), Expect = 0.051
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP GAG PLP PPPP G
Sbjct: 1017 AGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPG 1060
Score = 37.0 bits (84), Expect = 0.051
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP GAG PLP PPPP G
Sbjct: 1028 AGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPG 1071
Score = 37.0 bits (84), Expect = 0.051
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP GAG PLP PPPP G
Sbjct: 1039 AGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPG 1082
Score = 37.0 bits (84), Expect = 0.051
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP GAG PLP PPPP G
Sbjct: 1050 AGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPG 1093
Score = 37.0 bits (84), Expect = 0.051
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP GAG PLP PPPP G
Sbjct: 1061 AGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPG 1104
Score = 36.6 bits (83), Expect = 0.067
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP GAG PLP PPPP G
Sbjct: 1094 AGIPPPPPLPGVGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPG 1137
Score = 36.2 bits (82), Expect = 0.087
Identities = 29/77 (37%), Positives = 31/77 (40%), Gaps = 23/77 (29%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEGGYGDEQIYSASVTGL 195
AG P P P PG + P LP GAG PLP R PPPP G G
Sbjct: 1116 AGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLP-RVGIPPPPPLPGAG------------ 1161
Query: 196 YWKLLPEQAAPPGAGDP 212
+P PGAG P
Sbjct: 1162 ----IPPPPPLPGAGIP 1174
Score = 35.8 bits (81), Expect = 0.11
Identities = 28/79 (35%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPA---PPPPAEGGYGDEQIYSASVTGL-Y 196
AG P P P PG + P LP P P P PPPP G G G+
Sbjct: 1083 AGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1142
Query: 197 WKLLPEQAAPPGAGDPGAG 215
LP PP PGAG
Sbjct: 1143 PPPLPRVGIPPPPPLPGAG 1161
Score = 35.0 bits (79), Expect = 0.19
Identities = 24/74 (32%), Positives = 26/74 (35%), Gaps = 19/74 (25%)
Query: 142 GPPAPSPAPGPPVKEEPALPSGAGPLPDRAPA---PPPPAEGGYGDEQIYSASVTGLYWK 198
G P P P PG + P LP P P P PPPP G G
Sbjct: 1150 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVG--------------- 1194
Query: 199 LLPEQAAPPGAGDP 212
+P PGAG P
Sbjct: 1195 -IPPPPPLPGAGIP 1207
Score = 35.0 bits (79), Expect = 0.19
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP G G PLP PPPP G
Sbjct: 1171 AGIPPPPPLPGVGIPPPPPLP-GVGIPPPPPLPGAGIPPPPPLPG 1214
Score = 34.7 bits (78), Expect = 0.25
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 141 AGPPAPSPAPGPPVKEEPALPSGAG-----PLPDRAPAPPPPAEG 180
AG P P P PG + P LP G G PLP PPPP G
Sbjct: 1160 AGIPPPPPLPGAGIPPPPPLP-GVGIPPPPPLPGVGIPPPPPLPG 1203
Score = 34.3 bits (77), Expect = 0.33
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 16/88 (18%)
Query: 143 PPAPSPAPG--------------PPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIY 188
PP P P PG PP++ LP PLP PPPP G G +
Sbjct: 877 PPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGA-GILPLP 935
Query: 189 SASVTGL-YWKLLPEQAAPPGAGDPGAG 215
G+ LP A PP PGAG
Sbjct: 936 PLPGAGIPPPPPLPGAAIPPPPPLPGAG 963
Score = 34.3 bits (77), Expect = 0.33
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 142 GPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEG 180
G P P P PG + P LP G G P AP PPP G
Sbjct: 1194 GIPPPPPLPGAGIPPPPPLP-GMGIPPAPAPPLPPPGTG 1231
Score = 33.5 bits (75), Expect = 0.57
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 141 AGPPAPSPAPG---PPVKEEPALPSGAG-PLPDRAPAPPPPAEGGYGDEQIYSASVTGLY 196
AG P P P PG PP P P G G P P P PP G + + V G
Sbjct: 1204 AGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFL 1263
Query: 197 WKLLP 201
LP
Sbjct: 1264 PPPLP 1268
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 39.7 bits (91), Expect = 0.008
Identities = 30/84 (35%), Positives = 32/84 (38%), Gaps = 29/84 (34%)
Query: 139 GEAGPPAPSPAPG---PPVKEEPALPSGAGPLPDRAPAPP-PPAEGGYGDEQIYSASVTG 194
G PP P PG PPV ALP G +P P PP PP G+G
Sbjct: 229 GSGLPPPGMPPPGSFPPPVPPPGALPPG---IPPAMPPPPMPPGAAGHG----------- 274
Query: 195 LYWKLLPEQAAPPGAGDPGAGGCG 218
PP AG PGAG G
Sbjct: 275 -----------PPSAGTPGAGHPG 287
Score = 35.4 bits (80), Expect = 0.15
Identities = 36/125 (28%), Positives = 45/125 (36%), Gaps = 57/125 (45%)
Query: 128 KRHGISSQR----------------FYGEAGPP--APSPA----------PG-------- 151
+RHG +++R + +A PP AP+P PG
Sbjct: 185 ERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFP 244
Query: 152 PPVKEEPALPSGAGPLPDRAPAPP-PPAEGGYGDEQIYSASVTGLYWKLLPEQAAPPGAG 210
PPV ALP G +P P PP PP G+G P A PGAG
Sbjct: 245 PPVPPPGALPPG---IPPAMPPPPMPPGAAGHG-----------------PPSAGTPGAG 284
Query: 211 DPGAG 215
PG G
Sbjct: 285 HPGHG 289
Score = 29.6 bits (65), Expect = 8.2
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 6/48 (12%)
Query: 139 GEAGPPAPSPAPG------PPVKEEPALPSGAGPLPDRAPAPPPPAEG 180
G G P P P PG PP+ P P P+ P PP G
Sbjct: 328 GSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRG 375
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,539,691
Number of Sequences: 37866
Number of extensions: 2049810
Number of successful extensions: 26179
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 701
Number of HSP's that attempted gapping in prelim test: 15717
Number of HSP's gapped (non-prelim): 8808
length of query: 593
length of database: 18,247,518
effective HSP length: 108
effective length of query: 485
effective length of database: 14,157,990
effective search space: 6866625150
effective search space used: 6866625150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.