CLDN11 410

Name: CLDN11	Sequence: fasta or formatted (207aa)		NCBI GI: 10938016
Description: claudin 11		Referenced in: Gap Junctions and Tight Junctions Oligodendrocytes and Myelin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 23 2 C cysteine 6.3 13 2 D aspartate 2.4 5 1 E glutamate 1.9 4 1 F phenylalanine 2.9 6 1 G glycine 9.7 20 2 H histidine 1.9 4 1 I isoleucine 6.3 13 1 K lysine 2.4 5 1 L leucine 13.0 27 4 M methionine 1.9 4 1 N asparagine 1.0 2 1 P proline 3.9 8 1 Q glutamine 2.4 5 1 R arginine 3.4 7 2 S serine 4.8 10 3 T threonine 7.2 15 2 V valine 11.1 23 2 W tryptophan 2.4 5 1 Y tyrosine 3.9 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin 11 CLDN1 0.211 claudin 1 CLDN19 0.199 claudin 19 isoform a CLDN19 0.199 claudin 19 isoform b CLDN7 0.194 claudin 7 CLDN18 0.174 claudin 18 isoform 2 CLDN18 0.174 claudin 18 isoform 1 CLDN10 0.172 claudin 10 isoform b CLDN5 0.172 claudin 5 CLDN5 0.172 claudin 5 CLDN15 0.162 claudin 15 CLDN9 0.162 claudin 9 CLDN10 0.157 claudin 10 isoform a CLDN3 0.152 claudin 3 CLDN14 0.147 claudin 14 CLDN14 0.147 claudin 14 CLDN14 0.147 claudin 14 CLDN14 0.147 claudin 14 CLDN14 0.147 claudin 14 CLDN6 0.137 claudin 6 CLDN4 0.132 claudin 4 CLDN24 0.129 PREDICTED: claudin-24-like CLDN24 0.129 PREDICTED: claudin-24-like CLDN8 0.124 claudin 8 CLDN24 0.124 PREDICTED: claudin-24-like CLDN2 0.117 claudin 2 CLDN10 0.112 claudin 10 isoform a_i1 CLDN20 0.112 claudin 20 CLDN16 0.109 claudin 16 CLDN17 0.109 claudin 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.