CLDN8 27543

Name: CLDN8	Sequence: fasta or formatted (225aa)		NCBI GI: 40788011
Description: claudin 8		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 21 2 C cysteine 4.0 9 2 D aspartate 1.8 4 1 E glutamate 3.6 8 1 F phenylalanine 4.4 10 1 G glycine 7.1 16 2 H histidine 1.8 4 1 I isoleucine 7.6 17 2 K lysine 4.0 9 2 L leucine 8.9 20 2 M methionine 4.9 11 2 N asparagine 4.4 10 2 P proline 2.2 5 1 Q glutamine 3.1 7 1 R arginine 4.4 10 1 S serine 7.6 17 3 T threonine 5.3 12 2 V valine 9.8 22 2 W tryptophan 2.2 5 1 Y tyrosine 3.6 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin 8 CLDN17 0.571 claudin 17 CLDN3 0.420 claudin 3 CLDN9 0.408 claudin 9 CLDN6 0.399 claudin 6 CLDN4 0.390 claudin 4 CLDN5 0.374 claudin 5 CLDN5 0.374 claudin 5 CLDN7 0.369 claudin 7 CLDN1 0.339 claudin 1 CLDN14 0.318 claudin 14 CLDN14 0.318 claudin 14 CLDN14 0.318 claudin 14 CLDN14 0.318 claudin 14 CLDN14 0.318 claudin 14 CLDN19 0.316 claudin 19 isoform a CLDN19 0.316 claudin 19 isoform b CLDN2 0.281 claudin 2 CLDN10 0.251 claudin 10 isoform b CLDN24 0.234 PREDICTED: claudin-24-like CLDN24 0.234 PREDICTED: claudin-24-like CLDN24 0.234 PREDICTED: claudin-24-like CLDN10 0.234 claudin 10 isoform a CLDN15 0.232 claudin 15 CLDN20 0.227 claudin 20 CLDN22 0.220 claudin 22 CLDN18 0.206 claudin 18 isoform 2 CLDN10 0.204 claudin 10 isoform a_i1 CLDN18 0.204 claudin 18 isoform 1 LOC644672 0.174 claudin-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.