CLDN5 11219

Name: CLDN5	Sequence: fasta or formatted (303aa)		NCBI GI: 195947372
Description: claudin 5		Referenced in: Gap Junctions and Tight Junctions
Other entries for this name: alt mRNA [303aa] claudin 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.5 41 2 C cysteine 4.3 13 2 D aspartate 2.0 6 1 E glutamate 2.3 7 1 F phenylalanine 2.6 8 1 G glycine 12.2 37 2 H histidine 1.0 3 1 I isoleucine 2.0 6 1 K lysine 3.0 9 2 L leucine 11.6 35 2 M methionine 2.0 6 1 N asparagine 1.3 4 1 P proline 6.3 19 2 Q glutamine 4.0 12 1 R arginine 5.6 17 2 S serine 5.3 16 1 T threonine 6.3 19 2 V valine 9.6 29 2 W tryptophan 2.6 8 1 Y tyrosine 2.6 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin 5 CLDN5 1.000 claudin 5 CLDN9 0.365 claudin 9 CLDN6 0.360 claudin 6 CLDN3 0.356 claudin 3 CLDN4 0.338 claudin 4 CLDN1 0.289 claudin 1 CLDN7 0.283 claudin 7 CLDN19 0.271 claudin 19 isoform a CLDN19 0.271 claudin 19 isoform b CLDN8 0.269 claudin 8 CLDN17 0.237 claudin 17 CLDN14 0.236 claudin 14 CLDN14 0.236 claudin 14 CLDN14 0.236 claudin 14 CLDN14 0.236 claudin 14 CLDN14 0.236 claudin 14 CLDN2 0.207 claudin 2 CLDN10 0.187 claudin 10 isoform b CLDN20 0.181 claudin 20 CLDN15 0.181 claudin 15 CLDN10 0.162 claudin 10 isoform a CLDN24 0.157 PREDICTED: claudin-24-like CLDN18 0.156 claudin 18 isoform 1 CLDN24 0.154 PREDICTED: claudin-24-like CLDN24 0.154 PREDICTED: claudin-24-like CLDN18 0.151 claudin 18 isoform 2 CLDN22 0.147 claudin 22 CLDN10 0.134 claudin 10 isoform a_i1 LOC644672 0.130 claudin-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.